RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 GNPATO15228 680 aa11.28□□□□□ -0.6
VAT1-207ENST00000589828 DPEP1P16444 411 aa11.28□□□□□ -0.6
VAT1-207ENST00000589828 PRELPP51888 382 aa11.28□□□□□ -0.6
VAT1-207ENST00000589828 TGFB2P61812 414 aa11.28□□□□□ -0.6
VAT1-207ENST00000589828 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
VAT1-207ENST00000589828 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
VAT1-207ENST00000589828 FYB1O15117 783 aa11.27□□□□□ -0.61
VAT1-207ENST00000589828 HMGB2P26583 209 aaKnown RBP11.27□□□□□ -0.61
VAT1-207ENST00000589828 GGNBP2Q9H3C7 697 aa11.27□□□□□ -0.61
VAT1-207ENST00000589828 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
VAT1-207ENST00000589828 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
VAT1-207ENST00000589828 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
VAT1-207ENST00000589828 FCHSD2O94868 740 aa11.26□□□□□ -0.61
VAT1-207ENST00000589828 KCNA3P22001 575 aa11.26□□□□□ -0.61
VAT1-207ENST00000589828 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
VAT1-207ENST00000589828 TESK2Q96S53 571 aa11.26□□□□□ -0.61
VAT1-207ENST00000589828 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
VAT1-207ENST00000589828 FSTL1Q12841 308 aa11.25□□□□□ -0.61
VAT1-207ENST00000589828 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
VAT1-207ENST00000589828 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
VAT1-207ENST00000589828 INSRP06213 1382 aa11.25□□□□□ -0.61
VAT1-207ENST00000589828 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
VAT1-207ENST00000589828 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
VAT1-207ENST00000589828 RRAGCQ9HB90 399 aa11.24□□□□□ -0.61
VAT1-207ENST00000589828 ATG3Q9NT62 314 aa11.24□□□□□ -0.61
VAT1-207ENST00000589828 KIAA1551Q9HCM1 1747 aa11.23□□□□□ -0.61
VAT1-207ENST00000589828 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
VAT1-207ENST00000589828 TMF1P82094 1093 aa11.23□□□□□ -0.61
VAT1-207ENST00000589828 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
VAT1-207ENST00000589828 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
VAT1-207ENST00000589828 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
VAT1-207ENST00000589828 SMG6Q86US8 1419 aaKnown RBP11.23□□□□□ -0.61
VAT1-207ENST00000589828 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
VAT1-207ENST00000589828 GYS1P13807 737 aa11.22□□□□□ -0.61
VAT1-207ENST00000589828 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
VAT1-207ENST00000589828 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
VAT1-207ENST00000589828 TMOD3Q9NYL9 352 aa11.22□□□□□ -0.61
VAT1-207ENST00000589828 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
VAT1-207ENST00000589828 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.61
VAT1-207ENST00000589828 FLT4P35916 1363 aa11.21□□□□□ -0.61
VAT1-207ENST00000589828 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.61
VAT1-207ENST00000589828 HSPA1AP0DMV8 641 aaKnown RBP11.21□□□□□ -0.61
VAT1-207ENST00000589828 HSPA1BP0DMV9 641 aaKnown RBP11.21□□□□□ -0.61
VAT1-207ENST00000589828 TRAPPC3LQ5T215 181 aa11.21□□□□□ -0.61
VAT1-207ENST00000589828 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
VAT1-207ENST00000589828 RNF181Q9P0P0 153 aa11.21□□□□□ -0.61
VAT1-207ENST00000589828 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
VAT1-207ENST00000589828 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
VAT1-207ENST00000589828 KDRP35968 1356 aa11.2□□□□□ -0.62
VAT1-207ENST00000589828 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
VAT1-207ENST00000589828 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
VAT1-207ENST00000589828 KDM2BQ8NHM5 1336 aa11.19□□□□□ -0.62
VAT1-207ENST00000589828 PHKG2P15735 406 aa11.19□□□□□ -0.62
VAT1-207ENST00000589828 SMC1BQ8NDV3 1235 aa11.19□□□□□ -0.62
VAT1-207ENST00000589828 PIM2Q9P1W9 311 aa11.19□□□□□ -0.62
VAT1-207ENST00000589828 PARP3Q9Y6F1 533 aa11.19□□□□□ -0.62
VAT1-207ENST00000589828 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
VAT1-207ENST00000589828 RPS6KA4O75676 772 aa11.18□□□□□ -0.62
VAT1-207ENST00000589828 CHRNA5P30532 468 aa11.18□□□□□ -0.62
VAT1-207ENST00000589828 DDR1Q08345 913 aa11.18□□□□□ -0.62
VAT1-207ENST00000589828 DALRD3Q5D0E6 543 aaKnown RBP11.18□□□□□ -0.62
VAT1-207ENST00000589828 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
VAT1-207ENST00000589828 EYA1Q99502 592 aa11.18□□□□□ -0.62
VAT1-207ENST00000589828 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
VAT1-207ENST00000589828 KIF24Q5T7B8 1368 aa11.17□□□□□ -0.62
VAT1-207ENST00000589828 TONSLQ96HA7 1378 aa11.17□□□□□ -0.62
VAT1-207ENST00000589828 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
VAT1-207ENST00000589828 RFC4P35249 363 aa11.17□□□□□ -0.62
VAT1-207ENST00000589828 RASSF7Q02833 373 aa11.17□□□□□ -0.62
VAT1-207ENST00000589828 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
VAT1-207ENST00000589828 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
VAT1-207ENST00000589828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.62
VAT1-207ENST00000589828 ITGB4P16144 1822 aa11.16□□□□□ -0.62
VAT1-207ENST00000589828 CNTNAP4Q9C0A0 1308 aa11.16□□□□□ -0.62
VAT1-207ENST00000589828 FKBP8Q14318 412 aa11.16□□□□□ -0.62
VAT1-207ENST00000589828 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
VAT1-207ENST00000589828 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.62
VAT1-207ENST00000589828 PPM1GO15355 546 aaPredicted RBP11.15□□□□□ -0.62
VAT1-207ENST00000589828 C4AP0C0L4 1744 aa11.15□□□□□ -0.63
VAT1-207ENST00000589828 WASHC2AQ641Q2 1341 aa11.14□□□□□ -0.63
VAT1-207ENST00000589828 POTECB2RU33 542 aa11.14□□□□□ -0.63
VAT1-207ENST00000589828 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
VAT1-207ENST00000589828 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
VAT1-207ENST00000589828 POLRMTO00411 1230 aaKnown RBP11.13□□□□□ -0.63
VAT1-207ENST00000589828 VEGFAP15692 232 aaPredicted RBP11.13□□□□□ -0.63
VAT1-207ENST00000589828 CRKLP46109 303 aaKnown RBP11.13□□□□□ -0.63
VAT1-207ENST00000589828 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
VAT1-207ENST00000589828 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
VAT1-207ENST00000589828 ABCB7O75027 752 aa11.12□□□□□ -0.63
VAT1-207ENST00000589828 TM4SF1P30408 202 aa11.12□□□□□ -0.63
VAT1-207ENST00000589828 POLA2Q14181 598 aa11.12□□□□□ -0.63
VAT1-207ENST00000589828 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
VAT1-207ENST00000589828 SLC34A2O95436 690 aa11.11□□□□□ -0.63
VAT1-207ENST00000589828 DSG3P32926 999 aa11.11□□□□□ -0.63
VAT1-207ENST00000589828 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
VAT1-207ENST00000589828 POLKQ9UBT6 870 aa11.11□□□□□ -0.63
VAT1-207ENST00000589828 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
VAT1-207ENST00000589828 FOXN1O15353 648 aa11.1□□□□□ -0.63
VAT1-207ENST00000589828 LMNB1P20700 586 aa11.1□□□□□ -0.63
VAT1-207ENST00000589828 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms