RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
DNMT1-217ENST00000589091 NPC1L1Q9UHC9 1359 aa19.87■□□□□ 0.77
DNMT1-217ENST00000589091 MYH14Q7Z406 1995 aaKnown RBP19.87■□□□□ 0.77
DNMT1-217ENST00000589091 IL13P35225 146 aa19.87■□□□□ 0.77
DNMT1-217ENST00000589091 SULT6B1Q6IMI4 303 aa19.87■□□□□ 0.77
DNMT1-217ENST00000589091 SSFA2P28290 1259 aa19.86■□□□□ 0.77
DNMT1-217ENST00000589091 ATP6V1AP38606 617 aa19.86■□□□□ 0.77
DNMT1-217ENST00000589091 AEBP1Q8IUX7 1158 aa19.86■□□□□ 0.77
DNMT1-217ENST00000589091 ATG3Q9NT62 314 aa19.86■□□□□ 0.77
DNMT1-217ENST00000589091 LINC00116Q8NCU8 138 aa19.85■□□□□ 0.77
DNMT1-217ENST00000589091 C4AP0C0L4 1744 aa19.85■□□□□ 0.77
DNMT1-217ENST00000589091 MTHFSP49914 203 aa19.84■□□□□ 0.77
DNMT1-217ENST00000589091 KIF13BQ9NQT8 1826 aa19.83■□□□□ 0.77
DNMT1-217ENST00000589091 TJP1Q07157 1748 aa19.83■□□□□ 0.77
DNMT1-217ENST00000589091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
DNMT1-217ENST00000589091 CABP4P57796 275 aa19.83■□□□□ 0.77
DNMT1-217ENST00000589091 GPR162Q16538 588 aa19.83■□□□□ 0.77
DNMT1-217ENST00000589091 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.77
DNMT1-217ENST00000589091 MSL1Q68DK7 614 aa19.83■□□□□ 0.77
DNMT1-217ENST00000589091 ADAMTS7Q9UKP4 1686 aa19.83■□□□□ 0.76
DNMT1-217ENST00000589091 PHF14O94880 888 aa19.82■□□□□ 0.76
DNMT1-217ENST00000589091 ITPK1Q13572 414 aa19.82■□□□□ 0.76
DNMT1-217ENST00000589091 GNPATO15228 680 aa19.8■□□□□ 0.76
DNMT1-217ENST00000589091 DIAPH1O60610 1272 aaKnown RBP19.8■□□□□ 0.76
DNMT1-217ENST00000589091 RBM42Q9BTD8 480 aaKnown RBP19.8■□□□□ 0.76
DNMT1-217ENST00000589091 AKAP4Q5JQC9 854 aa19.79■□□□□ 0.76
DNMT1-217ENST00000589091 NLGN2Q8NFZ4 835 aa19.79■□□□□ 0.76
DNMT1-217ENST00000589091 CD2APQ9Y5K6 639 aa19.79■□□□□ 0.76
DNMT1-217ENST00000589091 MRC1P22897 1456 aa19.79■□□□□ 0.76
DNMT1-217ENST00000589091 RC3H1Q5TC82 1133 aaKnown RBP19.78■□□□□ 0.76
DNMT1-217ENST00000589091 AMIGO3Q86WK7 504 aa19.78■□□□□ 0.76
DNMT1-217ENST00000589091 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
DNMT1-217ENST00000589091 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
DNMT1-217ENST00000589091 CNTNAP4Q9C0A0 1308 aa19.77■□□□□ 0.76
DNMT1-217ENST00000589091 PELP1Q8IZL8 1130 aaKnown RBP19.77■□□□□ 0.76
DNMT1-217ENST00000589091 RTCBQ9Y3I0 505 aaKnown RBP19.77■□□□□ 0.76
DNMT1-217ENST00000589091 SIPA1L3O60292 1781 aaPredicted RBP19.77■□□□□ 0.76
DNMT1-217ENST00000589091 NFATC2IPQ8NCF5 419 aa19.76■□□□□ 0.75
DNMT1-217ENST00000589091 HMOX1P09601 288 aa19.75■□□□□ 0.75
DNMT1-217ENST00000589091 SLC4A9Q96Q91 983 aa19.75■□□□□ 0.75
DNMT1-217ENST00000589091 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
DNMT1-217ENST00000589091 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
DNMT1-217ENST00000589091 N4BP2Q86UW6 1770 aaPredicted RBP19.74■□□□□ 0.75
DNMT1-217ENST00000589091 SMIM5Q71RC9 77 aa19.73■□□□□ 0.75
DNMT1-217ENST00000589091 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
DNMT1-217ENST00000589091 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
DNMT1-217ENST00000589091 RPS6KA4O75676 772 aa19.72■□□□□ 0.75
DNMT1-217ENST00000589091 ZNF784Q8NCA9 323 aaPredicted RBP19.72■□□□□ 0.75
DNMT1-217ENST00000589091 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
DNMT1-217ENST00000589091 PTCD1O75127 700 aaKnown RBP19.71■□□□□ 0.75
DNMT1-217ENST00000589091 RNMTO43148 476 aaKnown RBP19.7■□□□□ 0.74
DNMT1-217ENST00000589091 MTHFSDQ2M296 383 aaKnown RBP19.7■□□□□ 0.74
DNMT1-217ENST00000589091 NLGN1Q8N2Q7 840 aa19.7■□□□□ 0.74
DNMT1-217ENST00000589091 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
DNMT1-217ENST00000589091 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
DNMT1-217ENST00000589091 YBX3P16989 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
DNMT1-217ENST00000589091 RFC4P35249 363 aa19.69■□□□□ 0.74
DNMT1-217ENST00000589091 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
DNMT1-217ENST00000589091 ARHGEF1Q92888 912 aaKnown RBP19.69■□□□□ 0.74
DNMT1-217ENST00000589091 KCPQ6ZWJ8 1503 aa19.68■□□□□ 0.74
DNMT1-217ENST00000589091 ARFGEF1Q9Y6D6 1849 aa19.68■□□□□ 0.74
DNMT1-217ENST00000589091 CRKLP46109 303 aaKnown RBP19.68■□□□□ 0.74
DNMT1-217ENST00000589091 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
DNMT1-217ENST00000589091 LGR6Q9HBX8 967 aa19.68■□□□□ 0.74
DNMT1-217ENST00000589091 UTRNP46939 3433 aa19.67■□□□□ 0.74
DNMT1-217ENST00000589091 MMP10P09238 476 aa19.67■□□□□ 0.74
DNMT1-217ENST00000589091 GAS2L2Q8NHY3 880 aa19.67■□□□□ 0.74
DNMT1-217ENST00000589091 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
DNMT1-217ENST00000589091 DLG5Q8TDM6 1919 aa19.66■□□□□ 0.74
DNMT1-217ENST00000589091 GYS1P13807 737 aa19.64■□□□□ 0.73
DNMT1-217ENST00000589091 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
DNMT1-217ENST00000589091 C10orf71Q711Q0 1435 aa19.64■□□□□ 0.73
DNMT1-217ENST00000589091 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
DNMT1-217ENST00000589091 VSIG10Q8N0Z9 540 aa19.63■□□□□ 0.73
DNMT1-217ENST00000589091 CCDC87Q9NVE4 849 aa19.63■□□□□ 0.73
DNMT1-217ENST00000589091 USP42Q9H9J4 1324 aaKnown RBP19.62■□□□□ 0.73
DNMT1-217ENST00000589091 DNAJC10Q8IXB1 793 aa19.62■□□□□ 0.73
DNMT1-217ENST00000589091 PARP3Q9Y6F1 533 aa19.62■□□□□ 0.73
DNMT1-217ENST00000589091 PXDNLA1KZ92 1463 aa19.61■□□□□ 0.73
DNMT1-217ENST00000589091 TGFB2P61812 414 aa19.61■□□□□ 0.73
DNMT1-217ENST00000589091 TEFQ10587 303 aa19.61■□□□□ 0.73
DNMT1-217ENST00000589091 SLC39A6Q13433 755 aa19.61■□□□□ 0.73
DNMT1-217ENST00000589091 INTS5Q6P9B9 1019 aaKnown RBP19.61■□□□□ 0.73
DNMT1-217ENST00000589091 TTC5Q8N0Z6 440 aa19.61■□□□□ 0.73
DNMT1-217ENST00000589091 NRXN2Q9P2S2 1712 aa19.6■□□□□ 0.73
DNMT1-217ENST00000589091 PPP2R1AP30153 589 aa19.6■□□□□ 0.73
DNMT1-217ENST00000589091 CYP19A1P11511 503 aaPredicted RBP19.59■□□□□ 0.73
DNMT1-217ENST00000589091 DLEC1Q9Y238 1755 aa19.59■□□□□ 0.73
DNMT1-217ENST00000589091 SOS1Q07889 1333 aaPredicted RBP19.58■□□□□ 0.73
DNMT1-217ENST00000589091 PRKAR2BP31323 418 aa19.58■□□□□ 0.72
DNMT1-217ENST00000589091 RSPH6AQ9H0K4 717 aa19.58■□□□□ 0.72
DNMT1-217ENST00000589091 GOLGB1Q14789 3259 aaKnown RBP19.58■□□□□ 0.72
DNMT1-217ENST00000589091 SCN7AQ01118 1682 aa19.58■□□□□ 0.72
DNMT1-217ENST00000589091 COL15A1P39059 1388 aa19.57■□□□□ 0.72
DNMT1-217ENST00000589091 ZPR1O75312 459 aa19.57■□□□□ 0.72
DNMT1-217ENST00000589091 IL17REQ8NFR9 667 aa19.57■□□□□ 0.72
DNMT1-217ENST00000589091 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
DNMT1-217ENST00000589091 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
DNMT1-217ENST00000589091 BCORQ6W2J9 1755 aa19.55■□□□□ 0.72
DNMT1-217ENST00000589091 FCHSD2O94868 740 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms