RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 ARXQ96QS3 562 aa25.11■■□□□ 1.61
PRKAR1A-216ENST00000589017 COL5A3P25940 1745 aaPredicted RBP25.1■■□□□ 1.61
PRKAR1A-216ENST00000589017 AK7Q96M32 723 aa25.1■■□□□ 1.61
PRKAR1A-216ENST00000589017 LINC00116Q8NCU8 138 aa25.09■■□□□ 1.61
PRKAR1A-216ENST00000589017 FLAD1Q8NFF5 587 aa25.09■■□□□ 1.61
PRKAR1A-216ENST00000589017 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
PRKAR1A-216ENST00000589017 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
PRKAR1A-216ENST00000589017 MRC1P22897 1456 aa25.09■■□□□ 1.61
PRKAR1A-216ENST00000589017 U2SURPO15042 1029 aaKnown RBP25.08■■□□□ 1.61
PRKAR1A-216ENST00000589017 MSH5O43196 834 aa25.08■■□□□ 1.61
PRKAR1A-216ENST00000589017 PPP2R1AP30153 589 aa25.08■■□□□ 1.61
PRKAR1A-216ENST00000589017 ATP6V1AP38606 617 aa25.08■■□□□ 1.61
PRKAR1A-216ENST00000589017 ITPK1Q13572 414 aa25.08■■□□□ 1.61
PRKAR1A-216ENST00000589017 MAP3K5Q99683 1374 aa25.07■■□□□ 1.6
PRKAR1A-216ENST00000589017 POLD1P28340 1107 aa25.07■■□□□ 1.6
PRKAR1A-216ENST00000589017 CICQ96RK0 1608 aaPredicted RBP25.07■■□□□ 1.6
PRKAR1A-216ENST00000589017 MTHFSDQ2M296 383 aaKnown RBP25.06■■□□□ 1.6
PRKAR1A-216ENST00000589017 NFATC2IPQ8NCF5 419 aa25.05■■□□□ 1.6
PRKAR1A-216ENST00000589017 SYT17Q9BSW7 474 aa25.05■■□□□ 1.6
PRKAR1A-216ENST00000589017 AMIGO3Q86WK7 504 aa25.04■■□□□ 1.6
PRKAR1A-216ENST00000589017 SLC4A9Q96Q91 983 aa25.04■■□□□ 1.6
PRKAR1A-216ENST00000589017 RBM42Q9BTD8 480 aaKnown RBP25.04■■□□□ 1.6
PRKAR1A-216ENST00000589017 SSFA2P28290 1259 aa25.03■■□□□ 1.6
PRKAR1A-216ENST00000589017 TJP1Q07157 1748 aa25.03■■□□□ 1.6
PRKAR1A-216ENST00000589017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.02■■□□□ 1.6
PRKAR1A-216ENST00000589017 LGR6Q9HBX8 967 aa25.02■■□□□ 1.6
PRKAR1A-216ENST00000589017 RNMTO43148 476 aaKnown RBP25.01■■□□□ 1.59
PRKAR1A-216ENST00000589017 PHF14O94880 888 aa25.01■■□□□ 1.59
PRKAR1A-216ENST00000589017 SLC52A2Q9HAB3 445 aa25.01■■□□□ 1.59
PRKAR1A-216ENST00000589017 DCAF8L1A6NGE4 600 aa25■■□□□ 1.59
PRKAR1A-216ENST00000589017 GNPATO15228 680 aa25■■□□□ 1.59
PRKAR1A-216ENST00000589017 MSL1Q68DK7 614 aa24.99■■□□□ 1.59
PRKAR1A-216ENST00000589017 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
PRKAR1A-216ENST00000589017 CNTNAP4Q9C0A0 1308 aa24.98■■□□□ 1.59
PRKAR1A-216ENST00000589017 PTCD1O75127 700 aaKnown RBP24.98■■□□□ 1.59
PRKAR1A-216ENST00000589017 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
PRKAR1A-216ENST00000589017 GAS2L2Q8NHY3 880 aa24.98■■□□□ 1.59
PRKAR1A-216ENST00000589017 RSPH6AQ9H0K4 717 aa24.98■■□□□ 1.59
PRKAR1A-216ENST00000589017 SIPA1L3O60292 1781 aaPredicted RBP24.97■■□□□ 1.59
PRKAR1A-216ENST00000589017 MYH14Q7Z406 1995 aaKnown RBP24.96■■□□□ 1.59
PRKAR1A-216ENST00000589017 UBR2Q8IWV8 1755 aa24.96■■□□□ 1.59
PRKAR1A-216ENST00000589017 RC3H1Q5TC82 1133 aaKnown RBP24.96■■□□□ 1.59
PRKAR1A-216ENST00000589017 PRKAR2BP31323 418 aa24.95■■□□□ 1.58
PRKAR1A-216ENST00000589017 KCPQ6ZWJ8 1503 aa24.95■■□□□ 1.58
PRKAR1A-216ENST00000589017 C4AP0C0L4 1744 aa24.95■■□□□ 1.58
PRKAR1A-216ENST00000589017 U2AF1L5P0DN76 240 aaPredicted RBP24.94■■□□□ 1.58
PRKAR1A-216ENST00000589017 U2AF1Q01081 240 aaKnown RBP eCLIP24.94■■□□□ 1.584e-6■□□□□ 10.1
PRKAR1A-216ENST00000589017 KLHL34Q8N239 644 aa24.94■■□□□ 1.58
PRKAR1A-216ENST00000589017 RTCBQ9Y3I0 505 aaKnown RBP24.94■■□□□ 1.58
PRKAR1A-216ENST00000589017 GNAT3A8MTJ3 354 aa24.93■■□□□ 1.58
PRKAR1A-216ENST00000589017 PHACTR3Q96KR7 559 aa24.92■■□□□ 1.58
PRKAR1A-216ENST00000589017 ADRA2BP18089 450 aa24.91■■□□□ 1.58
PRKAR1A-216ENST00000589017 RPS6KA4O75676 772 aa24.9■■□□□ 1.58
PRKAR1A-216ENST00000589017 FCHSD2O94868 740 aa24.9■■□□□ 1.58
PRKAR1A-216ENST00000589017 SLC39A6Q13433 755 aa24.9■■□□□ 1.58
PRKAR1A-216ENST00000589017 TRAPPC3LQ5T215 181 aa24.9■■□□□ 1.58
PRKAR1A-216ENST00000589017 IL17REQ8NFR9 667 aa24.9■■□□□ 1.58
PRKAR1A-216ENST00000589017 CRKLP46109 303 aaKnown RBP24.89■■□□□ 1.58
PRKAR1A-216ENST00000589017 CEMIPQ8WUJ3 1361 aa24.89■■□□□ 1.57
PRKAR1A-216ENST00000589017 TEFQ10587 303 aa24.88■■□□□ 1.57
PRKAR1A-216ENST00000589017 NLGN2Q8NFZ4 835 aa24.88■■□□□ 1.57
PRKAR1A-216ENST00000589017 DDX10Q13206 875 aaKnown RBP24.87■■□□□ 1.57
PRKAR1A-216ENST00000589017 ARHGEF1Q92888 912 aaKnown RBP24.87■■□□□ 1.57
PRKAR1A-216ENST00000589017 DNAJC10Q8IXB1 793 aa24.86■■□□□ 1.57
PRKAR1A-216ENST00000589017 RALBP1Q15311 655 aa24.85■■□□□ 1.57
PRKAR1A-216ENST00000589017 VSIG10Q8N0Z9 540 aa24.85■■□□□ 1.57
PRKAR1A-216ENST00000589017 CD2APQ9Y5K6 639 aa24.85■■□□□ 1.57
PRKAR1A-216ENST00000589017 RFC4P35249 363 aa24.84■■□□□ 1.57
PRKAR1A-216ENST00000589017 INTS5Q6P9B9 1019 aaKnown RBP24.84■■□□□ 1.57
PRKAR1A-216ENST00000589017 YY1P25490 414 aa24.83■■□□□ 1.57
PRKAR1A-216ENST00000589017 TTC5Q8N0Z6 440 aa24.83■■□□□ 1.57
PRKAR1A-216ENST00000589017 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.57
PRKAR1A-216ENST00000589017 CYP19A1P11511 503 aaPredicted RBP24.82■■□□□ 1.56
PRKAR1A-216ENST00000589017 NLGN1Q8N2Q7 840 aa24.82■■□□□ 1.56
PRKAR1A-216ENST00000589017 CHD4Q14839 1912 aa24.82■■□□□ 1.56
PRKAR1A-216ENST00000589017 DLG5Q8TDM6 1919 aa24.82■■□□□ 1.56
PRKAR1A-216ENST00000589017 GYS1P13807 737 aa24.81■■□□□ 1.56
PRKAR1A-216ENST00000589017 GPR162Q16538 588 aa24.81■■□□□ 1.56
PRKAR1A-216ENST00000589017 ZNF790Q6PG37 636 aa24.81■■□□□ 1.56
PRKAR1A-216ENST00000589017 KIF13BQ9NQT8 1826 aa24.81■■□□□ 1.56
PRKAR1A-216ENST00000589017 MMP10P09238 476 aa24.8■■□□□ 1.56
PRKAR1A-216ENST00000589017 RTF1Q92541 710 aaKnown RBP24.79■■□□□ 1.56
PRKAR1A-216ENST00000589017 SOS1Q07889 1333 aaPredicted RBP24.79■■□□□ 1.56
PRKAR1A-216ENST00000589017 USP42Q9H9J4 1324 aaKnown RBP24.79■■□□□ 1.56
PRKAR1A-216ENST00000589017 ZNF496Q96IT1 587 aaPredicted RBP24.78■■□□□ 1.56
PRKAR1A-216ENST00000589017 HEG1Q9ULI3 1381 aa24.78■■□□□ 1.56
PRKAR1A-216ENST00000589017 HTATSF1O43719 755 aaKnown RBP24.77■■□□□ 1.56
PRKAR1A-216ENST00000589017 NEFMP07197 916 aa24.77■■□□□ 1.56
PRKAR1A-216ENST00000589017 PELP1Q8IZL8 1130 aaKnown RBP24.77■■□□□ 1.56
PRKAR1A-216ENST00000589017 BTBD11A6QL63 1104 aa24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 ZEB1P37275 1124 aaPredicted RBP24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 MCM10Q7L590 875 aa24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 PLEKHF1Q96S99 279 aa24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 SRP68Q9UHB9 627 aaKnown RBP24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 ZBTB1Q9Y2K1 713 aa24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 MYBBP1AQ9BQG0 1328 aaKnown RBP24.76■■□□□ 1.55
PRKAR1A-216ENST00000589017 KIAA1551Q9HCM1 1747 aa24.75■■□□□ 1.55
PRKAR1A-216ENST00000589017 COL15A1P39059 1388 aa24.75■■□□□ 1.55
PRKAR1A-216ENST00000589017 UTRNP46939 3433 aa24.74■■□□□ 1.55
PRKAR1A-216ENST00000589017 FMNL2Q96PY5 1086 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms