RNA–Protein interactions for RNA: ENST00000588390.1

ATP5A1-207, Transcript of ATP synthase subunit alpha, mitochondrial, humanhuman

TSL 1 (best)

Gene ATP5A1, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5A1-207ENST00000588390 ATG3Q9NT62 314 aa26.37■■□□□ 1.81
ATP5A1-207ENST00000588390 DIAPH1O60610 1272 aaKnown RBP26.36■■□□□ 1.81
ATP5A1-207ENST00000588390 LINC00116Q8NCU8 138 aa26.36■■□□□ 1.81
ATP5A1-207ENST00000588390 HMGB2P26583 209 aaKnown RBP26.35■■□□□ 1.81
ATP5A1-207ENST00000588390 AMIGO3Q86WK7 504 aa26.35■■□□□ 1.81
ATP5A1-207ENST00000588390 ZNF831Q5JPB2 1677 aa26.34■■□□□ 1.81
ATP5A1-207ENST00000588390 DCAF8L1A6NGE4 600 aa26.34■■□□□ 1.81
ATP5A1-207ENST00000588390 ITPK1Q13572 414 aa26.34■■□□□ 1.81
ATP5A1-207ENST00000588390 MSL1Q68DK7 614 aa26.34■■□□□ 1.81
ATP5A1-207ENST00000588390 COL5A3P25940 1745 aaPredicted RBP26.34■■□□□ 1.81
ATP5A1-207ENST00000588390 MAP3K5Q99683 1374 aa26.33■■□□□ 1.81
ATP5A1-207ENST00000588390 ATP6V1AP38606 617 aa26.33■■□□□ 1.81
ATP5A1-207ENST00000588390 CABP4P57796 275 aa26.33■■□□□ 1.81
ATP5A1-207ENST00000588390 KLHL34Q8N239 644 aa26.33■■□□□ 1.81
ATP5A1-207ENST00000588390 GOLGB1Q14789 3259 aaKnown RBP26.33■■□□□ 1.81
ATP5A1-207ENST00000588390 PHF14O94880 888 aa26.32■■□□□ 1.8
ATP5A1-207ENST00000588390 SMIM5Q71RC9 77 aa26.32■■□□□ 1.8
ATP5A1-207ENST00000588390 FLAD1Q8NFF5 587 aa26.3■■□□□ 1.8
ATP5A1-207ENST00000588390 RBM42Q9BTD8 480 aaKnown RBP26.29■■□□□ 1.8
ATP5A1-207ENST00000588390 AKAP4Q5JQC9 854 aa26.28■■□□□ 1.8
ATP5A1-207ENST00000588390 SLC4A9Q96Q91 983 aa26.28■■□□□ 1.8
ATP5A1-207ENST00000588390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.27■■□□□ 1.8
ATP5A1-207ENST00000588390 U2SURPO15042 1029 aaKnown RBP26.27■■□□□ 1.8
ATP5A1-207ENST00000588390 GNPATO15228 680 aa26.27■■□□□ 1.8
ATP5A1-207ENST00000588390 TJP1Q07157 1748 aa26.26■■□□□ 1.79
ATP5A1-207ENST00000588390 ADAMTS7Q9UKP4 1686 aa26.26■■□□□ 1.79
ATP5A1-207ENST00000588390 MRC1P22897 1456 aa26.26■■□□□ 1.79
ATP5A1-207ENST00000588390 NFATC2IPQ8NCF5 419 aa26.26■■□□□ 1.79
ATP5A1-207ENST00000588390 SSFA2P28290 1259 aa26.25■■□□□ 1.79
ATP5A1-207ENST00000588390 MTHFSDQ2M296 383 aaKnown RBP26.25■■□□□ 1.79
ATP5A1-207ENST00000588390 CICQ96RK0 1608 aaPredicted RBP26.24■■□□□ 1.79
ATP5A1-207ENST00000588390 MYH14Q7Z406 1995 aaKnown RBP26.23■■□□□ 1.79
ATP5A1-207ENST00000588390 PTCD1O75127 700 aaKnown RBP26.22■■□□□ 1.79
ATP5A1-207ENST00000588390 YY1P25490 414 aa26.22■■□□□ 1.79
ATP5A1-207ENST00000588390 NLGN2Q8NFZ4 835 aa26.22■■□□□ 1.79
ATP5A1-207ENST00000588390 LGR6Q9HBX8 967 aa26.22■■□□□ 1.79
ATP5A1-207ENST00000588390 C4AP0C0L4 1744 aa26.21■■□□□ 1.79
ATP5A1-207ENST00000588390 RNMTO43148 476 aaKnown RBP26.2■■□□□ 1.78
ATP5A1-207ENST00000588390 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
ATP5A1-207ENST00000588390 SLC52A2Q9HAB3 445 aa26.2■■□□□ 1.78
ATP5A1-207ENST00000588390 PPP2R1AP30153 589 aa26.19■■□□□ 1.78
ATP5A1-207ENST00000588390 CHD4Q14839 1912 aa26.19■■□□□ 1.78
ATP5A1-207ENST00000588390 CNTNAP4Q9C0A0 1308 aa26.18■■□□□ 1.78
ATP5A1-207ENST00000588390 RTCBQ9Y3I0 505 aaKnown RBP26.17■■□□□ 1.78
ATP5A1-207ENST00000588390 SIPA1L3O60292 1781 aaPredicted RBP26.15■■□□□ 1.78
ATP5A1-207ENST00000588390 UBR2Q8IWV8 1755 aa26.15■■□□□ 1.78
ATP5A1-207ENST00000588390 KCPQ6ZWJ8 1503 aa26.15■■□□□ 1.78
ATP5A1-207ENST00000588390 PELP1Q8IZL8 1130 aaKnown RBP26.15■■□□□ 1.78
ATP5A1-207ENST00000588390 GPR162Q16538 588 aa26.14■■□□□ 1.78
ATP5A1-207ENST00000588390 RC3H1Q5TC82 1133 aaKnown RBP26.14■■□□□ 1.78
ATP5A1-207ENST00000588390 SLC39A6Q13433 755 aa26.13■■□□□ 1.77
ATP5A1-207ENST00000588390 TRAPPC3LQ5T215 181 aa26.13■■□□□ 1.77
ATP5A1-207ENST00000588390 GAS2L2Q8NHY3 880 aa26.13■■□□□ 1.77
ATP5A1-207ENST00000588390 PRKAR2BP31323 418 aa26.12■■□□□ 1.77
ATP5A1-207ENST00000588390 CRKLP46109 303 aaKnown RBP26.12■■□□□ 1.77
ATP5A1-207ENST00000588390 RSPH6AQ9H0K4 717 aa26.12■■□□□ 1.77
ATP5A1-207ENST00000588390 RPS6KA4O75676 772 aa26.11■■□□□ 1.77
ATP5A1-207ENST00000588390 NUDCQ9Y266 331 aa26.11■■□□□ 1.77
ATP5A1-207ENST00000588390 ADRA2BP18089 450 aa26.1■■□□□ 1.77
ATP5A1-207ENST00000588390 ARHGEF1Q92888 912 aaKnown RBP26.1■■□□□ 1.77
ATP5A1-207ENST00000588390 U2AF1L5P0DN76 240 aaPredicted RBP26.09■■□□□ 1.77
ATP5A1-207ENST00000588390 U2AF1Q01081 240 aaKnown RBP eCLIP26.09■■□□□ 1.77
ATP5A1-207ENST00000588390 CD2APQ9Y5K6 639 aa26.09■■□□□ 1.77
ATP5A1-207ENST00000588390 GNAT3A8MTJ3 354 aa26.08■■□□□ 1.77
ATP5A1-207ENST00000588390 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
ATP5A1-207ENST00000588390 PHACTR3Q96KR7 559 aa26.08■■□□□ 1.77
ATP5A1-207ENST00000588390 MMP10P09238 476 aa26.07■■□□□ 1.76
ATP5A1-207ENST00000588390 RFC4P35249 363 aa26.07■■□□□ 1.76
ATP5A1-207ENST00000588390 IL17REQ8NFR9 667 aa26.06■■□□□ 1.76
ATP5A1-207ENST00000588390 KIF13BQ9NQT8 1826 aa26.05■■□□□ 1.76
ATP5A1-207ENST00000588390 GYS1P13807 737 aa26.04■■□□□ 1.76
ATP5A1-207ENST00000588390 YBX3P16989 372 aaKnown RBP eCLIP26.04■■□□□ 1.76
ATP5A1-207ENST00000588390 TEFQ10587 303 aa26.04■■□□□ 1.76
ATP5A1-207ENST00000588390 INTS5Q6P9B9 1019 aaKnown RBP26.04■■□□□ 1.76
ATP5A1-207ENST00000588390 KIAA1551Q9HCM1 1747 aa26.02■■□□□ 1.76
ATP5A1-207ENST00000588390 TTC5Q8N0Z6 440 aa26.02■■□□□ 1.76
ATP5A1-207ENST00000588390 NLGN1Q8N2Q7 840 aa26.02■■□□□ 1.76
ATP5A1-207ENST00000588390 CCDC87Q9NVE4 849 aa26.02■■□□□ 1.76
ATP5A1-207ENST00000588390 SRP68Q9UHB9 627 aaKnown RBP26.02■■□□□ 1.76
ATP5A1-207ENST00000588390 CYP19A1P11511 503 aaPredicted RBP26.01■■□□□ 1.75
ATP5A1-207ENST00000588390 CEMIPQ8WUJ3 1361 aa26.01■■□□□ 1.75
ATP5A1-207ENST00000588390 N4BP2Q86UW6 1770 aaPredicted RBP26■■□□□ 1.75
ATP5A1-207ENST00000588390 USP42Q9H9J4 1324 aaKnown RBP26■■□□□ 1.75
ATP5A1-207ENST00000588390 SOS1Q07889 1333 aaPredicted RBP25.99■■□□□ 1.75
ATP5A1-207ENST00000588390 DLG5Q8TDM6 1919 aa25.99■■□□□ 1.75
ATP5A1-207ENST00000588390 FCHSD2O94868 740 aa25.99■■□□□ 1.75
ATP5A1-207ENST00000588390 VSIG10Q8N0Z9 540 aa25.99■■□□□ 1.75
ATP5A1-207ENST00000588390 WWC3Q9ULE0 1092 aa25.99■■□□□ 1.75
ATP5A1-207ENST00000588390 C10orf71Q711Q0 1435 aa25.98■■□□□ 1.75
ATP5A1-207ENST00000588390 ZBTB1Q9Y2K1 713 aa25.98■■□□□ 1.75
ATP5A1-207ENST00000588390 ZNF790Q6PG37 636 aa25.97■■□□□ 1.75
ATP5A1-207ENST00000588390 COL15A1P39059 1388 aa25.96■■□□□ 1.75
ATP5A1-207ENST00000588390 FKBP8Q14318 412 aa25.96■■□□□ 1.75
ATP5A1-207ENST00000588390 ZNF496Q96IT1 587 aaPredicted RBP25.96■■□□□ 1.75
ATP5A1-207ENST00000588390 PXDNLA1KZ92 1463 aa25.96■■□□□ 1.75
ATP5A1-207ENST00000588390 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.75
ATP5A1-207ENST00000588390 GRIN3BO60391 1043 aa25.95■■□□□ 1.74
ATP5A1-207ENST00000588390 DDX10Q13206 875 aaKnown RBP25.95■■□□□ 1.74
ATP5A1-207ENST00000588390 MCM10Q7L590 875 aa25.95■■□□□ 1.74
ATP5A1-207ENST00000588390 ZNF784Q8NCA9 323 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms