RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 GIGYF1O75420 1035 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-205ENST00000587888 PLEKHO1Q53GL0 409 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-205ENST00000587888 MORC1Q86VD1 984 aa19.41■□□□□ 0.7
ERCC1-205ENST00000587888 UBR3Q6ZT12 1888 aa19.4■□□□□ 0.7
ERCC1-205ENST00000587888 IGSF1Q8N6C5 1336 aa19.4■□□□□ 0.7
ERCC1-205ENST00000587888 ERVV-2B6SEH9 535 aa19.39■□□□□ 0.69
ERCC1-205ENST00000587888 UTRNP46939 3433 aa19.39■□□□□ 0.69
ERCC1-205ENST00000587888 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
ERCC1-205ENST00000587888 ZNF530Q6P9A1 599 aaPredicted RBP19.38■□□□□ 0.69
ERCC1-205ENST00000587888 DCAF5Q96JK2 942 aa19.38■□□□□ 0.69
ERCC1-205ENST00000587888 CABP4P57796 275 aa19.37■□□□□ 0.69
ERCC1-205ENST00000587888 TRAPPC3LQ5T215 181 aa19.37■□□□□ 0.69
ERCC1-205ENST00000587888 KNSTRNQ9Y448 316 aa19.37■□□□□ 0.69
ERCC1-205ENST00000587888 AMOTQ4VCS5 1084 aa19.36■□□□□ 0.69
ERCC1-205ENST00000587888 AEBP1Q8IUX7 1158 aa19.36■□□□□ 0.69
ERCC1-205ENST00000587888 SLC4A9Q96Q91 983 aa19.36■□□□□ 0.69
ERCC1-205ENST00000587888 RTCBQ9Y3I0 505 aaKnown RBP19.36■□□□□ 0.69
ERCC1-205ENST00000587888 MMP10P09238 476 aa19.35■□□□□ 0.69
ERCC1-205ENST00000587888 MTHFSP49914 203 aa19.35■□□□□ 0.69
ERCC1-205ENST00000587888 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
ERCC1-205ENST00000587888 SULT6B1Q6IMI4 303 aa19.34■□□□□ 0.69
ERCC1-205ENST00000587888 PTCD1O75127 700 aaKnown RBP19.33■□□□□ 0.68
ERCC1-205ENST00000587888 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
ERCC1-205ENST00000587888 ARHGEF1Q92888 912 aaKnown RBP19.33■□□□□ 0.68
ERCC1-205ENST00000587888 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
ERCC1-205ENST00000587888 RFC4P35249 363 aa19.31■□□□□ 0.68
ERCC1-205ENST00000587888 RC3H1Q5TC82 1133 aaKnown RBP19.31■□□□□ 0.68
ERCC1-205ENST00000587888 NLGN1Q8N2Q7 840 aa19.31■□□□□ 0.68
ERCC1-205ENST00000587888 KDM6AO15550 1401 aaPredicted RBP19.31■□□□□ 0.68
ERCC1-205ENST00000587888 ATP10DQ9P241 1426 aa19.31■□□□□ 0.68
ERCC1-205ENST00000587888 KDRP35968 1356 aa19.31■□□□□ 0.68
ERCC1-205ENST00000587888 PLEKHG2Q9H7P9 1386 aa19.31■□□□□ 0.68
ERCC1-205ENST00000587888 RPS6KA4O75676 772 aa19.3■□□□□ 0.68
ERCC1-205ENST00000587888 IL13P35225 146 aa19.3■□□□□ 0.68
ERCC1-205ENST00000587888 GPBP1L1Q9HC44 474 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-205ENST00000587888 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
ERCC1-205ENST00000587888 CNTNAP4Q9C0A0 1308 aa19.27■□□□□ 0.68
ERCC1-205ENST00000587888 GYS1P13807 737 aa19.27■□□□□ 0.68
ERCC1-205ENST00000587888 ADRA2BP18089 450 aa19.27■□□□□ 0.68
ERCC1-205ENST00000587888 TGFB2P61812 414 aa19.26■□□□□ 0.67
ERCC1-205ENST00000587888 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
ERCC1-205ENST00000587888 PARP3Q9Y6F1 533 aa19.26■□□□□ 0.67
ERCC1-205ENST00000587888 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
ERCC1-205ENST00000587888 CCDC87Q9NVE4 849 aa19.25■□□□□ 0.67
ERCC1-205ENST00000587888 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
ERCC1-205ENST00000587888 HMOX1P09601 288 aa19.24■□□□□ 0.67
ERCC1-205ENST00000587888 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
ERCC1-205ENST00000587888 GOLGB1Q14789 3259 aaKnown RBP19.24■□□□□ 0.67
ERCC1-205ENST00000587888 KIF7Q2M1P5 1343 aa19.24■□□□□ 0.67
ERCC1-205ENST00000587888 ZNF831Q5JPB2 1677 aa19.24■□□□□ 0.67
ERCC1-205ENST00000587888 CICQ96RK0 1608 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-205ENST00000587888 CNGB1Q14028 1251 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-205ENST00000587888 AKAP4Q5JQC9 854 aa19.23■□□□□ 0.67
ERCC1-205ENST00000587888 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
ERCC1-205ENST00000587888 COL5A3P25940 1745 aaPredicted RBP19.22■□□□□ 0.67
ERCC1-205ENST00000587888 ADCY9O60503 1353 aa19.22■□□□□ 0.67
ERCC1-205ENST00000587888 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
ERCC1-205ENST00000587888 DPEP1P16444 411 aa19.22■□□□□ 0.67
ERCC1-205ENST00000587888 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
ERCC1-205ENST00000587888 ARHGAP27Q6ZUM4 889 aa19.22■□□□□ 0.67
ERCC1-205ENST00000587888 PXDNLA1KZ92 1463 aa19.22■□□□□ 0.67
ERCC1-205ENST00000587888 MYH14Q7Z406 1995 aaKnown RBP19.21■□□□□ 0.67
ERCC1-205ENST00000587888 SLC39A6Q13433 755 aa19.2■□□□□ 0.66
ERCC1-205ENST00000587888 FKBP8Q14318 412 aa19.2■□□□□ 0.66
ERCC1-205ENST00000587888 INTS5Q6P9B9 1019 aaKnown RBP19.2■□□□□ 0.66
ERCC1-205ENST00000587888 DNAJC10Q8IXB1 793 aa19.2■□□□□ 0.66
ERCC1-205ENST00000587888 SLC52A2Q9HAB3 445 aa19.2■□□□□ 0.66
ERCC1-205ENST00000587888 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
ERCC1-205ENST00000587888 FCHSD2O94868 740 aa19.19■□□□□ 0.66
ERCC1-205ENST00000587888 KIF13BQ9NQT8 1826 aa19.18■□□□□ 0.66
ERCC1-205ENST00000587888 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
ERCC1-205ENST00000587888 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
ERCC1-205ENST00000587888 USP42Q9H9J4 1324 aaKnown RBP19.18■□□□□ 0.66
ERCC1-205ENST00000587888 C10orf71Q711Q0 1435 aa19.17■□□□□ 0.66
ERCC1-205ENST00000587888 C4AP0C0L4 1744 aa19.17■□□□□ 0.66
ERCC1-205ENST00000587888 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
ERCC1-205ENST00000587888 MTHFSDQ2M296 383 aaKnown RBP19.17■□□□□ 0.66
ERCC1-205ENST00000587888 ZPR1O75312 459 aa19.16■□□□□ 0.66
ERCC1-205ENST00000587888 KCNA3P22001 575 aa19.16■□□□□ 0.66
ERCC1-205ENST00000587888 KIAA1551Q9HCM1 1747 aa19.16■□□□□ 0.66
ERCC1-205ENST00000587888 DDR1Q08345 913 aa19.15■□□□□ 0.66
ERCC1-205ENST00000587888 USPL1Q5W0Q7 1092 aa19.15■□□□□ 0.66
ERCC1-205ENST00000587888 PIM2Q9P1W9 311 aa19.15■□□□□ 0.66
ERCC1-205ENST00000587888 TJP1Q07157 1748 aa19.14■□□□□ 0.66
ERCC1-205ENST00000587888 KIF3CO14782 793 aa19.14■□□□□ 0.65
ERCC1-205ENST00000587888 CYP19A1P11511 503 aaPredicted RBP19.14■□□□□ 0.65
ERCC1-205ENST00000587888 HSPA6P17066 643 aa19.13■□□□□ 0.65
ERCC1-205ENST00000587888 TM4SF1P30408 202 aa19.13■□□□□ 0.65
ERCC1-205ENST00000587888 POLRMTO00411 1230 aaKnown RBP19.12■□□□□ 0.65
ERCC1-205ENST00000587888 U2SURPO15042 1029 aaKnown RBP19.12■□□□□ 0.65
ERCC1-205ENST00000587888 CHRNA5P30532 468 aa19.12■□□□□ 0.65
ERCC1-205ENST00000587888 SOS1Q07889 1333 aaPredicted RBP19.11■□□□□ 0.65
ERCC1-205ENST00000587888 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
ERCC1-205ENST00000587888 CANXP27824 592 aaKnown RBP19.1■□□□□ 0.65
ERCC1-205ENST00000587888 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
ERCC1-205ENST00000587888 ZBTB1Q9Y2K1 713 aa19.1■□□□□ 0.65
ERCC1-205ENST00000587888 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
ERCC1-205ENST00000587888 NFIXQ14938 502 aa19.08■□□□□ 0.64
ERCC1-205ENST00000587888 TTC5Q8N0Z6 440 aa19.08■□□□□ 0.64
ERCC1-205ENST00000587888 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms