RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
VMP1-205ENST00000587470 SRSF11Q05519 484 aaKnown RBP9.18□□□□□ -0.94
VMP1-205ENST00000587470 NFATC2IPQ8NCF5 419 aa9.18□□□□□ -0.94
VMP1-205ENST00000587470 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
VMP1-205ENST00000587470 TIMMDC1Q9NPL8 285 aa9.18□□□□□ -0.94
VMP1-205ENST00000587470 SKIP12755 728 aa9.17□□□□□ -0.94
VMP1-205ENST00000587470 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
VMP1-205ENST00000587470 TRIM22Q8IYM9 498 aa9.17□□□□□ -0.94
VMP1-205ENST00000587470 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
VMP1-205ENST00000587470 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
VMP1-205ENST00000587470 H7C1W4 665 aa9.16□□□□□ -0.94
VMP1-205ENST00000587470 DBN1Q16643 649 aa9.16□□□□□ -0.94
VMP1-205ENST00000587470 TMEM214Q6NUQ4 689 aaKnown RBP9.16□□□□□ -0.94
VMP1-205ENST00000587470 POM121CA8CG34 1229 aa9.15□□□□□ -0.94
VMP1-205ENST00000587470 RNF225M0QZC1 329 aaPredicted RBP9.15□□□□□ -0.94
VMP1-205ENST00000587470 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
VMP1-205ENST00000587470 INHAP05111 366 aa9.15□□□□□ -0.94
VMP1-205ENST00000587470 CELA2BP08218 269 aaPredicted RBP9.15□□□□□ -0.94
VMP1-205ENST00000587470 EML3Q32P44 896 aa9.15□□□□□ -0.94
VMP1-205ENST00000587470 GNASQ5JWF2 1037 aa9.15□□□□□ -0.94
VMP1-205ENST00000587470 F11P03951 625 aa9.14□□□□□ -0.95
VMP1-205ENST00000587470 SCNN1DP51172 638 aa9.14□□□□□ -0.95
VMP1-205ENST00000587470 GDF10P55107 478 aa9.14□□□□□ -0.95
VMP1-205ENST00000587470 HDGFL1Q5TGJ6 251 aa9.14□□□□□ -0.95
VMP1-205ENST00000587470 FOXR1Q6PIV2 292 aa9.14□□□□□ -0.95
VMP1-205ENST00000587470 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
VMP1-205ENST00000587470 THBS1P07996 1170 aa9.13□□□□□ -0.95
VMP1-205ENST00000587470 PHKA2P46019 1235 aa9.13□□□□□ -0.95
VMP1-205ENST00000587470 TLR1Q15399 786 aa9.13□□□□□ -0.95
VMP1-205ENST00000587470 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
VMP1-205ENST00000587470 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
VMP1-205ENST00000587470 PCDHGA11Q9Y5H2 935 aa9.13□□□□□ -0.95
VMP1-205ENST00000587470 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
VMP1-205ENST00000587470 GPR25O00155 361 aa9.12□□□□□ -0.95
VMP1-205ENST00000587470 IRS1P35568 1242 aa9.12□□□□□ -0.95
VMP1-205ENST00000587470 ADAMTS19Q8TE59 1207 aa9.12□□□□□ -0.95
VMP1-205ENST00000587470 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
VMP1-205ENST00000587470 NCOA4Q13772 614 aa9.11□□□□□ -0.95
VMP1-205ENST00000587470 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
VMP1-205ENST00000587470 FNBP4Q8N3X1 1017 aaPredicted RBP9.11□□□□□ -0.95
VMP1-205ENST00000587470 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
VMP1-205ENST00000587470 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
VMP1-205ENST00000587470 TMEM229AB2RXF0 380 aa9.1□□□□□ -0.95
VMP1-205ENST00000587470 SMTNP53814 917 aa9.1□□□□□ -0.95
VMP1-205ENST00000587470 PROSER2Q86WR7 435 aaPredicted RBP9.1□□□□□ -0.95
VMP1-205ENST00000587470 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
VMP1-205ENST00000587470 IGF1RP08069 1367 aa9.1□□□□□ -0.95
VMP1-205ENST00000587470 USP17L5A8MUK1 530 aa9.09□□□□□ -0.95
VMP1-205ENST00000587470 GTF2IP78347 998 aa9.09□□□□□ -0.95
VMP1-205ENST00000587470 DEPDC4Q8N2C3 294 aa9.09□□□□□ -0.95
VMP1-205ENST00000587470 GTPBP3Q969Y2 492 aaKnown RBP9.09□□□□□ -0.95
VMP1-205ENST00000587470 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
VMP1-205ENST00000587470 NUCKS1Q9H1E3 243 aaKnown RBP9.09□□□□□ -0.95
VMP1-205ENST00000587470 ITGB2P05107 769 aa9.08□□□□□ -0.96
VMP1-205ENST00000587470 KANK3Q6NY19 840 aa9.08□□□□□ -0.96
VMP1-205ENST00000587470 ACDQ96AP0 544 aa9.08□□□□□ -0.96
VMP1-205ENST00000587470 GPAMQ9HCL2 828 aa9.08□□□□□ -0.96
VMP1-205ENST00000587470 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
VMP1-205ENST00000587470 A6NJR5 290 aa9.07□□□□□ -0.96
VMP1-205ENST00000587470 BACH1O14867 736 aa9.07□□□□□ -0.96
VMP1-205ENST00000587470 MSX1P28360 303 aa9.07□□□□□ -0.96
VMP1-205ENST00000587470 MTFR1Q15390 333 aa9.07□□□□□ -0.96
VMP1-205ENST00000587470 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
VMP1-205ENST00000587470 PLEKHM2Q8IWE5 1019 aa9.07□□□□□ -0.96
VMP1-205ENST00000587470 NIFKQ9BYG3 293 aaKnown RBP9.07□□□□□ -0.96
VMP1-205ENST00000587470 A6NJY4 79 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 ATP9BO43861 1147 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
VMP1-205ENST00000587470 PSME1Q06323 249 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 UBAP2LQ14157 1087 aaKnown RBP9.06□□□□□ -0.96
VMP1-205ENST00000587470 LBRQ14739 615 aaKnown RBP9.06□□□□□ -0.96
VMP1-205ENST00000587470 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 PGBD3Q8N328 593 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 SCARF2Q96GP6 870 aaPredicted RBP9.06□□□□□ -0.96
VMP1-205ENST00000587470 UCN2Q96RP3 112 aa9.06□□□□□ -0.96
VMP1-205ENST00000587470 USP17L3A6NCW0 530 aa9.05□□□□□ -0.96
VMP1-205ENST00000587470 USP17L4A6NCW7 530 aa9.05□□□□□ -0.96
VMP1-205ENST00000587470 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
VMP1-205ENST00000587470 USP17L1Q7RTZ2 530 aa9.05□□□□□ -0.96
VMP1-205ENST00000587470 PLA2G4AP47712 749 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 ATP1A2P50993 1020 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
VMP1-205ENST00000587470 C1orf216Q8TAB5 229 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 GLMNQ92990 594 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 CFHR5Q9BXR6 569 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
VMP1-205ENST00000587470 CNTNAP5Q8WYK1 1306 aa9.04□□□□□ -0.96
VMP1-205ENST00000587470 BCRP11274 1271 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 MAP3K10Q02779 954 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 EFHC2Q5JST6 749 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 AIDAQ96BJ3 306 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 CRISPLD1Q9H336 500 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 PHF24Q9UPV7 400 aa9.03□□□□□ -0.96
VMP1-205ENST00000587470 ZBTB7BO15156 539 aaPredicted RBP9.02□□□□□ -0.97
VMP1-205ENST00000587470 MX2P20592 715 aa9.02□□□□□ -0.97
VMP1-205ENST00000587470 GPAT2Q6NUI2 795 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms