RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 LINC00116Q8NCU8 138 aa19.18■□□□□ 0.66
HDAC5-203ENST00000586339 NLGN2Q8NFZ4 835 aa19.18■□□□□ 0.66
HDAC5-203ENST00000586339 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
HDAC5-203ENST00000586339 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
HDAC5-203ENST00000586339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
HDAC5-203ENST00000586339 ZNF530Q6P9A1 599 aaPredicted RBP19.17■□□□□ 0.66
HDAC5-203ENST00000586339 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
HDAC5-203ENST00000586339 ATP6V1AP38606 617 aa19.16■□□□□ 0.66
HDAC5-203ENST00000586339 ZNF784Q8NCA9 323 aaPredicted RBP19.16■□□□□ 0.66
HDAC5-203ENST00000586339 CD2APQ9Y5K6 639 aa19.16■□□□□ 0.66
HDAC5-203ENST00000586339 ITPK1Q13572 414 aa19.15■□□□□ 0.66
HDAC5-203ENST00000586339 C1orf141Q5JVX7 400 aa19.15■□□□□ 0.66
HDAC5-203ENST00000586339 AMIGO3Q86WK7 504 aa19.15■□□□□ 0.66
HDAC5-203ENST00000586339 MYH14Q7Z406 1995 aaKnown RBP19.15■□□□□ 0.66
HDAC5-203ENST00000586339 PHF14O94880 888 aa19.14■□□□□ 0.65
HDAC5-203ENST00000586339 IL13P35225 146 aa19.14■□□□□ 0.65
HDAC5-203ENST00000586339 AEBP1Q8IUX7 1158 aa19.14■□□□□ 0.65
HDAC5-203ENST00000586339 GNPATO15228 680 aa19.13■□□□□ 0.65
HDAC5-203ENST00000586339 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
HDAC5-203ENST00000586339 KIF13BQ9NQT8 1826 aa19.13■□□□□ 0.65
HDAC5-203ENST00000586339 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
HDAC5-203ENST00000586339 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
HDAC5-203ENST00000586339 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
HDAC5-203ENST00000586339 NPC1L1Q9UHC9 1359 aa19.11■□□□□ 0.65
HDAC5-203ENST00000586339 CNTNAP4Q9C0A0 1308 aa19.11■□□□□ 0.65
HDAC5-203ENST00000586339 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
HDAC5-203ENST00000586339 MTHFSP49914 203 aa19.11■□□□□ 0.65
HDAC5-203ENST00000586339 CABP4P57796 275 aa19.11■□□□□ 0.65
HDAC5-203ENST00000586339 ADRA2BP18089 450 aa19.1■□□□□ 0.65
HDAC5-203ENST00000586339 RC3H1Q5TC82 1133 aaKnown RBP19.1■□□□□ 0.65
HDAC5-203ENST00000586339 MRC1P22897 1456 aa19.09■□□□□ 0.65
HDAC5-203ENST00000586339 TJP1Q07157 1748 aa19.09■□□□□ 0.65
HDAC5-203ENST00000586339 ADAMTS7Q9UKP4 1686 aa19.09■□□□□ 0.65
HDAC5-203ENST00000586339 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
HDAC5-203ENST00000586339 SLC4A9Q96Q91 983 aa19.09■□□□□ 0.65
HDAC5-203ENST00000586339 RBM42Q9BTD8 480 aaKnown RBP19.09■□□□□ 0.65
HDAC5-203ENST00000586339 RTCBQ9Y3I0 505 aaKnown RBP19.09■□□□□ 0.65
HDAC5-203ENST00000586339 SMIM5Q71RC9 77 aa19.08■□□□□ 0.64
HDAC5-203ENST00000586339 AKAP4Q5JQC9 854 aa19.07■□□□□ 0.64
HDAC5-203ENST00000586339 TRAPPC3LQ5T215 181 aa19.06■□□□□ 0.64
HDAC5-203ENST00000586339 NFATC2IPQ8NCF5 419 aa19.05■□□□□ 0.64
HDAC5-203ENST00000586339 KIAA1551Q9HCM1 1747 aa19.05■□□□□ 0.64
HDAC5-203ENST00000586339 COL3A1P02461 1466 aaPredicted RBP19.04■□□□□ 0.64
HDAC5-203ENST00000586339 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
HDAC5-203ENST00000586339 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
HDAC5-203ENST00000586339 CC2D1BQ5T0F9 858 aaKnown RBP19.04■□□□□ 0.64
HDAC5-203ENST00000586339 MMP10P09238 476 aa19.03■□□□□ 0.64
HDAC5-203ENST00000586339 NLGN1Q8N2Q7 840 aa19.03■□□□□ 0.64
HDAC5-203ENST00000586339 UBR2Q8IWV8 1755 aa19.02■□□□□ 0.64
HDAC5-203ENST00000586339 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.64
HDAC5-203ENST00000586339 ARHGEF1Q92888 912 aaKnown RBP19.02■□□□□ 0.64
HDAC5-203ENST00000586339 SLC52A2Q9HAB3 445 aa19.02■□□□□ 0.64
HDAC5-203ENST00000586339 BRCA1P38398 1863 aaKnown RBP19.02■□□□□ 0.64
HDAC5-203ENST00000586339 N4BP2Q86UW6 1770 aaPredicted RBP19.01■□□□□ 0.63
HDAC5-203ENST00000586339 C10orf71Q711Q0 1435 aa19.01■□□□□ 0.63
HDAC5-203ENST00000586339 HMOX1P09601 288 aa19.01■□□□□ 0.63
HDAC5-203ENST00000586339 RFC4P35249 363 aa19■□□□□ 0.63
HDAC5-203ENST00000586339 PXDNLA1KZ92 1463 aa18.99■□□□□ 0.63
HDAC5-203ENST00000586339 RNMTO43148 476 aaKnown RBP18.99■□□□□ 0.63
HDAC5-203ENST00000586339 GYS1P13807 737 aa18.99■□□□□ 0.63
HDAC5-203ENST00000586339 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
HDAC5-203ENST00000586339 KCPQ6ZWJ8 1503 aa18.99■□□□□ 0.63
HDAC5-203ENST00000586339 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
HDAC5-203ENST00000586339 ADCY9O60503 1353 aa18.97■□□□□ 0.63
HDAC5-203ENST00000586339 TGFB2P61812 414 aa18.97■□□□□ 0.63
HDAC5-203ENST00000586339 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
HDAC5-203ENST00000586339 LGR6Q9HBX8 967 aa18.97■□□□□ 0.63
HDAC5-203ENST00000586339 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
HDAC5-203ENST00000586339 GIGYF1O75420 1035 aaPredicted RBP18.96■□□□□ 0.63
HDAC5-203ENST00000586339 C1QTNF8P60827 252 aa18.96■□□□□ 0.63
HDAC5-203ENST00000586339 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
HDAC5-203ENST00000586339 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
HDAC5-203ENST00000586339 ATP10DQ9P241 1426 aa18.95■□□□□ 0.62
HDAC5-203ENST00000586339 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
HDAC5-203ENST00000586339 INTS5Q6P9B9 1019 aaKnown RBP18.93■□□□□ 0.62
HDAC5-203ENST00000586339 DNAJC10Q8IXB1 793 aa18.93■□□□□ 0.62
HDAC5-203ENST00000586339 VSIG10Q8N0Z9 540 aa18.93■□□□□ 0.62
HDAC5-203ENST00000586339 GAS2L2Q8NHY3 880 aa18.93■□□□□ 0.62
HDAC5-203ENST00000586339 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
HDAC5-203ENST00000586339 AFDNP55196 1824 aaKnown RBP18.92■□□□□ 0.62
HDAC5-203ENST00000586339 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
HDAC5-203ENST00000586339 SLC39A6Q13433 755 aa18.91■□□□□ 0.62
HDAC5-203ENST00000586339 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
HDAC5-203ENST00000586339 CYP19A1P11511 503 aaPredicted RBP18.9■□□□□ 0.62
HDAC5-203ENST00000586339 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
HDAC5-203ENST00000586339 WWC3Q9ULE0 1092 aa18.9■□□□□ 0.62
HDAC5-203ENST00000586339 NRXN2Q9P2S2 1712 aa18.9■□□□□ 0.62
HDAC5-203ENST00000586339 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
HDAC5-203ENST00000586339 FKBP8Q14318 412 aa18.89■□□□□ 0.61
HDAC5-203ENST00000586339 COL15A1P39059 1388 aa18.89■□□□□ 0.61
HDAC5-203ENST00000586339 ZPR1O75312 459 aa18.88■□□□□ 0.61
HDAC5-203ENST00000586339 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
HDAC5-203ENST00000586339 TTC5Q8N0Z6 440 aa18.88■□□□□ 0.61
HDAC5-203ENST00000586339 A0A0G2JLW4 131 aa18.87■□□□□ 0.61
HDAC5-203ENST00000586339 DDR1Q08345 913 aa18.87■□□□□ 0.61
HDAC5-203ENST00000586339 TEFQ10587 303 aa18.87■□□□□ 0.61
HDAC5-203ENST00000586339 CEMIPQ8WUJ3 1361 aa18.87■□□□□ 0.61
HDAC5-203ENST00000586339 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
HDAC5-203ENST00000586339 BCS1LQ9Y276 419 aa18.87■□□□□ 0.61
HDAC5-203ENST00000586339 ZBTB1Q9Y2K1 713 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms