RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 ADCY9O60503 1353 aa27.04■■□□□ 1.92
PTBP1-208ENST00000585956 KDM6AO15550 1401 aaPredicted RBP27.03■■□□□ 1.92
PTBP1-208ENST00000585956 ATP6V1AP38606 617 aa27.03■■□□□ 1.92
PTBP1-208ENST00000585956 HSPA5P11021 654 aaKnown RBP27.02■■□□□ 1.92
PTBP1-208ENST00000585956 PCGF6Q9BYE7 350 aa27.02■■□□□ 1.92
PTBP1-208ENST00000585956 TIMELESSQ9UNS1 1208 aa27.01■■□□□ 1.91
PTBP1-208ENST00000585956 COL5A3P25940 1745 aaPredicted RBP27.01■■□□□ 1.91
PTBP1-208ENST00000585956 AEBP1Q8IUX7 1158 aa27■■□□□ 1.91
PTBP1-208ENST00000585956 PANK3Q9H999 370 aa27■■□□□ 1.91
PTBP1-208ENST00000585956 MYH14Q7Z406 1995 aaKnown RBP26.98■■□□□ 1.91
PTBP1-208ENST00000585956 KIF13BQ9NQT8 1826 aa26.97■■□□□ 1.91
PTBP1-208ENST00000585956 N4BP2Q86UW6 1770 aaPredicted RBP26.97■■□□□ 1.91
PTBP1-208ENST00000585956 ZNF526Q8TF50 670 aaPredicted RBP26.97■■□□□ 1.91
PTBP1-208ENST00000585956 PXDNLA1KZ92 1463 aa26.96■■□□□ 1.91
PTBP1-208ENST00000585956 MMP10P09238 476 aa26.96■■□□□ 1.91
PTBP1-208ENST00000585956 CICQ96RK0 1608 aaPredicted RBP26.96■■□□□ 1.91
PTBP1-208ENST00000585956 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.91
PTBP1-208ENST00000585956 C4AP0C0L4 1744 aa26.93■■□□□ 1.9
PTBP1-208ENST00000585956 RBM42Q9BTD8 480 aaKnown RBP26.93■■□□□ 1.9
PTBP1-208ENST00000585956 ERVV-2B6SEH9 535 aa26.91■■□□□ 1.9
PTBP1-208ENST00000585956 ZNF530Q6P9A1 599 aaPredicted RBP26.91■■□□□ 1.9
PTBP1-208ENST00000585956 ARHGEF1Q92888 912 aaKnown RBP26.91■■□□□ 1.9
PTBP1-208ENST00000585956 CLSPNQ9HAW4 1339 aa26.9■■□□□ 1.9
PTBP1-208ENST00000585956 PLEKHG2Q9H7P9 1386 aa26.9■■□□□ 1.9
PTBP1-208ENST00000585956 HMGB2P26583 209 aaKnown RBP26.9■■□□□ 1.9
PTBP1-208ENST00000585956 EIF4G2P78344 907 aaKnown RBP eCLIP26.9■■□□□ 1.9
PTBP1-208ENST00000585956 DCAF5Q96JK2 942 aa26.89■■□□□ 1.9
PTBP1-208ENST00000585956 TJP1Q07157 1748 aa26.89■■□□□ 1.9
PTBP1-208ENST00000585956 C10orf71Q711Q0 1435 aa26.89■■□□□ 1.89
PTBP1-208ENST00000585956 GPBP1L1Q9HC44 474 aaPredicted RBP26.88■■□□□ 1.89
PTBP1-208ENST00000585956 A0A0G2JLW4 131 aa26.87■■□□□ 1.89
PTBP1-208ENST00000585956 GYS1P13807 737 aa26.87■■□□□ 1.89
PTBP1-208ENST00000585956 PLEKHO1Q53GL0 409 aaPredicted RBP26.87■■□□□ 1.89
PTBP1-208ENST00000585956 TRAPPC3LQ5T215 181 aa26.87■■□□□ 1.89
PTBP1-208ENST00000585956 RTCBQ9Y3I0 505 aaKnown RBP26.87■■□□□ 1.89
PTBP1-208ENST00000585956 CNTNAP4Q9C0A0 1308 aa26.87■■□□□ 1.89
PTBP1-208ENST00000585956 BRCA1P38398 1863 aaKnown RBP26.86■■□□□ 1.89
PTBP1-208ENST00000585956 PTCD1O75127 700 aaKnown RBP26.84■■□□□ 1.89
PTBP1-208ENST00000585956 CABP4P57796 275 aa26.84■■□□□ 1.89
PTBP1-208ENST00000585956 RC3H1Q5TC82 1133 aaKnown RBP26.84■■□□□ 1.89
PTBP1-208ENST00000585956 MORC1Q86VD1 984 aa26.84■■□□□ 1.89
PTBP1-208ENST00000585956 SRP68Q9UHB9 627 aaKnown RBP26.84■■□□□ 1.89
PTBP1-208ENST00000585956 ADAMTS7Q9UKP4 1686 aa26.84■■□□□ 1.89
PTBP1-208ENST00000585956 SCN11AQ9UI33 1791 aa26.84■■□□□ 1.89
PTBP1-208ENST00000585956 RPS6KA4O75676 772 aa26.83■■□□□ 1.89
PTBP1-208ENST00000585956 IL13P35225 146 aa26.83■■□□□ 1.89
PTBP1-208ENST00000585956 SULT6B1Q6IMI4 303 aa26.83■■□□□ 1.89
PTBP1-208ENST00000585956 NFATC2IPQ8NCF5 419 aa26.83■■□□□ 1.89
PTBP1-208ENST00000585956 KIF3CO14782 793 aa26.82■■□□□ 1.88
PTBP1-208ENST00000585956 HSP90AB1P08238 724 aaKnown RBP26.82■■□□□ 1.88
PTBP1-208ENST00000585956 MTHFSP49914 203 aa26.82■■□□□ 1.88
PTBP1-208ENST00000585956 DPEP1P16444 411 aa26.81■■□□□ 1.88
PTBP1-208ENST00000585956 KCNA3P22001 575 aa26.8■■□□□ 1.88
PTBP1-208ENST00000585956 CRKLP46109 303 aaKnown RBP26.8■■□□□ 1.88
PTBP1-208ENST00000585956 AMOTQ4VCS5 1084 aa26.8■■□□□ 1.88
PTBP1-208ENST00000585956 AMER1Q5JTC6 1135 aaPredicted RBP26.79■■□□□ 1.88
PTBP1-208ENST00000585956 NLGN1Q8N2Q7 840 aa26.79■■□□□ 1.88
PTBP1-208ENST00000585956 BCS1LQ9Y276 419 aa26.79■■□□□ 1.88
PTBP1-208ENST00000585956 ADRA2BP18089 450 aa26.78■■□□□ 1.88
PTBP1-208ENST00000585956 RFC4P35249 363 aa26.78■■□□□ 1.88
PTBP1-208ENST00000585956 DDR1Q08345 913 aa26.78■■□□□ 1.88
PTBP1-208ENST00000585956 VIRMAQ69YN4 1812 aaKnown RBP26.77■■□□□ 1.88
PTBP1-208ENST00000585956 TGFB2P61812 414 aa26.77■■□□□ 1.88
PTBP1-208ENST00000585956 FKBP8Q14318 412 aa26.77■■□□□ 1.88
PTBP1-208ENST00000585956 INTS5Q6P9B9 1019 aaKnown RBP26.76■■□□□ 1.87
PTBP1-208ENST00000585956 LGR6Q9HBX8 967 aa26.76■■□□□ 1.87
PTBP1-208ENST00000585956 C1orf141Q5JVX7 400 aa26.75■■□□□ 1.87
PTBP1-208ENST00000585956 USP42Q9H9J4 1324 aaKnown RBP26.74■■□□□ 1.87
PTBP1-208ENST00000585956 HSPA6P17066 643 aa26.74■■□□□ 1.87
PTBP1-208ENST00000585956 CCDC87Q9NVE4 849 aa26.73■■□□□ 1.87
PTBP1-208ENST00000585956 KIF7Q2M1P5 1343 aa26.72■■□□□ 1.87
PTBP1-208ENST00000585956 DNAJC10Q8IXB1 793 aa26.72■■□□□ 1.87
PTBP1-208ENST00000585956 PARP3Q9Y6F1 533 aa26.72■■□□□ 1.87
PTBP1-208ENST00000585956 MRC1P22897 1456 aa26.72■■□□□ 1.87
PTBP1-208ENST00000585956 KCPQ6ZWJ8 1503 aa26.71■■□□□ 1.87
PTBP1-208ENST00000585956 HMOX1P09601 288 aa26.71■■□□□ 1.87
PTBP1-208ENST00000585956 SLC39A6Q13433 755 aa26.71■■□□□ 1.87
PTBP1-208ENST00000585956 ARHGAP27Q6ZUM4 889 aa26.71■■□□□ 1.87
PTBP1-208ENST00000585956 KNSTRNQ9Y448 316 aa26.71■■□□□ 1.87
PTBP1-208ENST00000585956 ARFGEF1Q9Y6D6 1849 aa26.71■■□□□ 1.87
PTBP1-208ENST00000585956 FCHSD2O94868 740 aa26.7■■□□□ 1.86
PTBP1-208ENST00000585956 SLC52A2Q9HAB3 445 aa26.69■■□□□ 1.86
PTBP1-208ENST00000585956 CHRNA5P30532 468 aa26.68■■□□□ 1.86
PTBP1-208ENST00000585956 AKAP4Q5JQC9 854 aa26.68■■□□□ 1.86
PTBP1-208ENST00000585956 NMRK2Q9NPI5 230 aa26.68■■□□□ 1.86
PTBP1-208ENST00000585956 POLRMTO00411 1230 aaKnown RBP26.67■■□□□ 1.86
PTBP1-208ENST00000585956 CCER1Q8TC90 406 aaPredicted RBP26.67■■□□□ 1.86
PTBP1-208ENST00000585956 RNMTO43148 476 aaKnown RBP26.66■■□□□ 1.86
PTBP1-208ENST00000585956 AFDNP55196 1824 aaKnown RBP26.66■■□□□ 1.86
PTBP1-208ENST00000585956 SOS1Q07889 1333 aaPredicted RBP26.65■■□□□ 1.86
PTBP1-208ENST00000585956 PER1O15534 1290 aaPredicted RBP26.65■■□□□ 1.86
PTBP1-208ENST00000585956 TM4SF1P30408 202 aa26.65■■□□□ 1.86
PTBP1-208ENST00000585956 MTHFSDQ2M296 383 aaKnown RBP26.65■■□□□ 1.86
PTBP1-208ENST00000585956 USPL1Q5W0Q7 1092 aa26.65■■□□□ 1.86
PTBP1-208ENST00000585956 CYP19A1P11511 503 aaPredicted RBP26.64■■□□□ 1.86
PTBP1-208ENST00000585956 C9orf131Q5VYM1 1079 aa26.63■■□□□ 1.85
PTBP1-208ENST00000585956 ZBTB1Q9Y2K1 713 aa26.63■■□□□ 1.85
PTBP1-208ENST00000585956 COL3A1P02461 1466 aaPredicted RBP26.62■■□□□ 1.85
PTBP1-208ENST00000585956 UBR2Q8IWV8 1755 aa26.62■■□□□ 1.85
PTBP1-208ENST00000585956 CC2D1BQ5T0F9 858 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms