RNA–Protein interactions for RNA: ENST00000585914.5

CIRBP-206, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-206ENST00000585914 ATG3Q9NT62 314 aa23.27■■□□□ 1.32
CIRBP-206ENST00000585914 PKD1L3Q7Z443 1732 aa23.27■■□□□ 1.32
CIRBP-206ENST00000585914 RBM42Q9BTD8 480 aaKnown RBP23.26■■□□□ 1.31
CIRBP-206ENST00000585914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.314e-13■□□□□ 8.8
CIRBP-206ENST00000585914 KIF7Q2M1P5 1343 aa23.25■■□□□ 1.31
CIRBP-206ENST00000585914 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
CIRBP-206ENST00000585914 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-206ENST00000585914 MMP10P09238 476 aa23.23■■□□□ 1.31
CIRBP-206ENST00000585914 UBR3Q6ZT12 1888 aa23.23■■□□□ 1.31
CIRBP-206ENST00000585914 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
CIRBP-206ENST00000585914 TRAPPC3LQ5T215 181 aa23.2■■□□□ 1.3
CIRBP-206ENST00000585914 PANK3Q9H999 370 aa23.2■■□□□ 1.3
CIRBP-206ENST00000585914 RTCBQ9Y3I0 505 aaKnown RBP23.2■■□□□ 1.3
CIRBP-206ENST00000585914 CABP4P57796 275 aa23.17■■□□□ 1.3
CIRBP-206ENST00000585914 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-206ENST00000585914 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-206ENST00000585914 SLC4A9Q96Q91 983 aa23.17■■□□□ 1.3
CIRBP-206ENST00000585914 BCS1LQ9Y276 419 aa23.17■■□□□ 1.3
CIRBP-206ENST00000585914 ANKRD26Q9UPS8 1709 aa23.16■■□□□ 1.3
CIRBP-206ENST00000585914 A0A0G2JLW4 131 aa23.16■■□□□ 1.3
CIRBP-206ENST00000585914 ADCY9O60503 1353 aa23.15■■□□□ 1.3
CIRBP-206ENST00000585914 RFC4P35249 363 aa23.15■■□□□ 1.3
CIRBP-206ENST00000585914 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
CIRBP-206ENST00000585914 DCAF5Q96JK2 942 aa23.15■■□□□ 1.3
CIRBP-206ENST00000585914 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
CIRBP-206ENST00000585914 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
CIRBP-206ENST00000585914 PTCD1O75127 700 aaKnown RBP23.14■■□□□ 1.29
CIRBP-206ENST00000585914 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
CIRBP-206ENST00000585914 NLGN1Q8N2Q7 840 aa23.14■■□□□ 1.29
CIRBP-206ENST00000585914 AEBP1Q8IUX7 1158 aa23.13■■□□□ 1.29
CIRBP-206ENST00000585914 MTHFSP49914 203 aa23.12■■□□□ 1.29
CIRBP-206ENST00000585914 ARHGAP27Q6ZUM4 889 aa23.12■■□□□ 1.29
CIRBP-206ENST00000585914 KDRP35968 1356 aa23.12■■□□□ 1.29
CIRBP-206ENST00000585914 HSPA6P17066 643 aa23.11■■□□□ 1.29
CIRBP-206ENST00000585914 C1orf141Q5JVX7 400 aa23.11■■□□□ 1.29
CIRBP-206ENST00000585914 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
CIRBP-206ENST00000585914 CCDC87Q9NVE4 849 aa23.11■■□□□ 1.29
CIRBP-206ENST00000585914 DPEP1P16444 411 aa23.1■■□□□ 1.29
CIRBP-206ENST00000585914 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
CIRBP-206ENST00000585914 CICQ96RK0 1608 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-206ENST00000585914 PXDNLA1KZ92 1463 aa23.1■■□□□ 1.29
CIRBP-206ENST00000585914 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
CIRBP-206ENST00000585914 FCHSD2O94868 740 aa23.09■■□□□ 1.29
CIRBP-206ENST00000585914 GYS1P13807 737 aa23.09■■□□□ 1.29
CIRBP-206ENST00000585914 TGFB2P61812 414 aa23.09■■□□□ 1.29
CIRBP-206ENST00000585914 AMOTQ4VCS5 1084 aa23.09■■□□□ 1.29
CIRBP-206ENST00000585914 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-206ENST00000585914 KIF3CO14782 793 aa23.08■■□□□ 1.29
CIRBP-206ENST00000585914 RC3H1Q5TC82 1133 aaKnown RBP23.08■■□□□ 1.29
CIRBP-206ENST00000585914 SULT6B1Q6IMI4 303 aa23.08■■□□□ 1.29
CIRBP-206ENST00000585914 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
CIRBP-206ENST00000585914 ADRA2BP18089 450 aa23.07■■□□□ 1.28
CIRBP-206ENST00000585914 SRP68Q9UHB9 627 aaKnown RBP23.07■■□□□ 1.28
CIRBP-206ENST00000585914 CNTNAP4Q9C0A0 1308 aa23.07■■□□□ 1.28
CIRBP-206ENST00000585914 N4BP2Q86UW6 1770 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-206ENST00000585914 CRKLP46109 303 aaKnown RBP23.05■■□□□ 1.28
CIRBP-206ENST00000585914 IFFO2Q5TF58 517 aa23.04■■□□□ 1.28
CIRBP-206ENST00000585914 C10orf71Q711Q0 1435 aa23.03■■□□□ 1.28
CIRBP-206ENST00000585914 DDX10Q13206 875 aaKnown RBP23.03■■□□□ 1.28
CIRBP-206ENST00000585914 CEP350Q5VT06 3117 aa23.02■■□□□ 1.28
CIRBP-206ENST00000585914 FKBP8Q14318 412 aa23.02■■□□□ 1.28
CIRBP-206ENST00000585914 NMRK2Q9NPI5 230 aa23■■□□□ 1.27
CIRBP-206ENST00000585914 PLEKHG2Q9H7P9 1386 aa23■■□□□ 1.27
CIRBP-206ENST00000585914 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-206ENST00000585914 C9orf131Q5VYM1 1079 aa22.99■■□□□ 1.27
CIRBP-206ENST00000585914 C4AP0C0L4 1744 aa22.99■■□□□ 1.27
CIRBP-206ENST00000585914 KCNA3P22001 575 aa22.98■■□□□ 1.27
CIRBP-206ENST00000585914 CHRNA5P30532 468 aa22.98■■□□□ 1.27
CIRBP-206ENST00000585914 IL13P35225 146 aa22.98■■□□□ 1.27
CIRBP-206ENST00000585914 DDR1Q08345 913 aa22.98■■□□□ 1.27
CIRBP-206ENST00000585914 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
CIRBP-206ENST00000585914 PIM2Q9P1W9 311 aa22.98■■□□□ 1.27
CIRBP-206ENST00000585914 USP42Q9H9J4 1324 aaKnown RBP22.98■■□□□ 1.27
CIRBP-206ENST00000585914 COL5A3P25940 1745 aaPredicted RBP22.97■■□□□ 1.27
CIRBP-206ENST00000585914 HMOX1P09601 288 aa22.97■■□□□ 1.27
CIRBP-206ENST00000585914 KIAA1551Q9HCM1 1747 aa22.96■■□□□ 1.27
CIRBP-206ENST00000585914 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
CIRBP-206ENST00000585914 MYH14Q7Z406 1995 aaKnown RBP22.96■■□□□ 1.27
CIRBP-206ENST00000585914 TOMM70O94826 608 aa22.96■■□□□ 1.27
CIRBP-206ENST00000585914 SLC39A6Q13433 755 aa22.96■■□□□ 1.27
CIRBP-206ENST00000585914 DALRD3Q5D0E6 543 aaKnown RBP22.96■■□□□ 1.27
CIRBP-206ENST00000585914 INTS5Q6P9B9 1019 aaKnown RBP22.96■■□□□ 1.27
CIRBP-206ENST00000585914 LGR6Q9HBX8 967 aa22.96■■□□□ 1.27
CIRBP-206ENST00000585914 ZPR1O75312 459 aa22.95■■□□□ 1.26
CIRBP-206ENST00000585914 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
CIRBP-206ENST00000585914 AMER1Q5JTC6 1135 aaPredicted RBP22.95■■□□□ 1.26
CIRBP-206ENST00000585914 USPL1Q5W0Q7 1092 aa22.95■■□□□ 1.26
CIRBP-206ENST00000585914 AKAP4Q5JQC9 854 aa22.94■■□□□ 1.26
CIRBP-206ENST00000585914 APLP1P51693 650 aa22.93■■□□□ 1.26
CIRBP-206ENST00000585914 C16orf71Q8IYS4 520 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-206ENST00000585914 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
CIRBP-206ENST00000585914 RNF181Q9P0P0 153 aa22.93■■□□□ 1.26
CIRBP-206ENST00000585914 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
CIRBP-206ENST00000585914 NPC1L1Q9UHC9 1359 aa22.91■■□□□ 1.26
CIRBP-206ENST00000585914 POLRMTO00411 1230 aaKnown RBP22.91■■□□□ 1.26
CIRBP-206ENST00000585914 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
CIRBP-206ENST00000585914 CC2D1BQ5T0F9 858 aaKnown RBP22.9■■□□□ 1.26
CIRBP-206ENST00000585914 TM4SF1P30408 202 aa22.88■■□□□ 1.25
CIRBP-206ENST00000585914 HTRA3P83110 453 aa22.88■■□□□ 1.25
CIRBP-206ENST00000585914 TJP1Q07157 1748 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms