RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
SRSF1-207ENST00000584668 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.53
SRSF1-207ENST00000584668 FYB1O15117 783 aa11.77□□□□□ -0.53
SRSF1-207ENST00000584668 ADRA2BP18089 450 aa11.77□□□□□ -0.53
SRSF1-207ENST00000584668 FBLN1P23142 703 aa11.77□□□□□ -0.53
SRSF1-207ENST00000584668 HSP90AB2PQ58FF8 381 aa11.77□□□□□ -0.53
SRSF1-207ENST00000584668 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.53
SRSF1-207ENST00000584668 PIGBQ92521 554 aa11.77□□□□□ -0.53
SRSF1-207ENST00000584668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.533e-19■■□□□ 14.5
SRSF1-207ENST00000584668 FSTL1Q12841 308 aa11.76□□□□□ -0.53
SRSF1-207ENST00000584668 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
SRSF1-207ENST00000584668 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
SRSF1-207ENST00000584668 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
SRSF1-207ENST00000584668 LINC00116Q8NCU8 138 aa11.76□□□□□ -0.53
SRSF1-207ENST00000584668 TESK2Q96S53 571 aa11.76□□□□□ -0.53
SRSF1-207ENST00000584668 COL5A3P25940 1745 aaPredicted RBP11.76□□□□□ -0.53
SRSF1-207ENST00000584668 NCAPD2Q15021 1401 aa11.76□□□□□ -0.53
SRSF1-207ENST00000584668 FCHSD2O94868 740 aa11.75□□□□□ -0.53
SRSF1-207ENST00000584668 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
SRSF1-207ENST00000584668 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
SRSF1-207ENST00000584668 PPM1GO15355 546 aaPredicted RBP11.74□□□□□ -0.53
SRSF1-207ENST00000584668 HSP90AB1P08238 724 aaKnown RBP11.74□□□□□ -0.53
SRSF1-207ENST00000584668 RFC4P35249 363 aa11.74□□□□□ -0.53
SRSF1-207ENST00000584668 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
SRSF1-207ENST00000584668 KLRG1Q96E93 195 aa11.73□□□□□ -0.53
SRSF1-207ENST00000584668 PCNTO95613 3336 aa11.72□□□□□ -0.53
SRSF1-207ENST00000584668 CNTNAP4Q9C0A0 1308 aa11.72□□□□□ -0.53
SRSF1-207ENST00000584668 NMRK2Q9NPI5 230 aa11.72□□□□□ -0.53
SRSF1-207ENST00000584668 KDRP35968 1356 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
SRSF1-207ENST00000584668 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 PHKG2P15735 406 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 ITPK1Q13572 414 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 DNAJC5GQ8N7S2 189 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
SRSF1-207ENST00000584668 PIM2Q9P1W9 311 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
SRSF1-207ENST00000584668 WASHC2AQ641Q2 1341 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 ERVV-2B6SEH9 535 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 DPEP1P16444 411 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
SRSF1-207ENST00000584668 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
SRSF1-207ENST00000584668 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 SMC1BQ8NDV3 1235 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
SRSF1-207ENST00000584668 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
SRSF1-207ENST00000584668 TNS4Q8IZW8 715 aa11.69□□□□□ -0.54
SRSF1-207ENST00000584668 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
SRSF1-207ENST00000584668 ATG3Q9NT62 314 aa11.69□□□□□ -0.54
SRSF1-207ENST00000584668 RNF181Q9P0P0 153 aa11.69□□□□□ -0.54
SRSF1-207ENST00000584668 SBF1O95248 1867 aa11.68□□□□□ -0.54
SRSF1-207ENST00000584668 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
SRSF1-207ENST00000584668 GYS1P13807 737 aa11.68□□□□□ -0.54
SRSF1-207ENST00000584668 DCAF5Q96JK2 942 aa11.68□□□□□ -0.54
SRSF1-207ENST00000584668 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
SRSF1-207ENST00000584668 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
SRSF1-207ENST00000584668 EYA1Q99502 592 aa11.67□□□□□ -0.54
SRSF1-207ENST00000584668 CAPN15O75808 1086 aa11.66□□□□□ -0.54
SRSF1-207ENST00000584668 CABP4P57796 275 aa11.66□□□□□ -0.54
SRSF1-207ENST00000584668 AMOTQ4VCS5 1084 aa11.66□□□□□ -0.54
SRSF1-207ENST00000584668 PLEKHO1Q53GL0 409 aaPredicted RBP11.66□□□□□ -0.54
SRSF1-207ENST00000584668 C1orf141Q5JVX7 400 aa11.66□□□□□ -0.54
SRSF1-207ENST00000584668 DLEC1Q9Y238 1755 aa11.66□□□□□ -0.54
SRSF1-207ENST00000584668 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
SRSF1-207ENST00000584668 PRELPP51888 382 aa11.65□□□□□ -0.54
SRSF1-207ENST00000584668 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
SRSF1-207ENST00000584668 USP42Q9H9J4 1324 aaKnown RBP11.64□□□□□ -0.55
SRSF1-207ENST00000584668 ZPR1O75312 459 aa11.64□□□□□ -0.55
SRSF1-207ENST00000584668 RRAGCQ9HB90 399 aa11.64□□□□□ -0.55
SRSF1-207ENST00000584668 TJP1Q07157 1748 aa11.63□□□□□ -0.55
SRSF1-207ENST00000584668 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
SRSF1-207ENST00000584668 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
SRSF1-207ENST00000584668 VEGFAP15692 232 aaPredicted RBP11.62□□□□□ -0.55
SRSF1-207ENST00000584668 LMNB1P20700 586 aa11.62□□□□□ -0.55
SRSF1-207ENST00000584668 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
SRSF1-207ENST00000584668 MTHFSP49914 203 aa11.62□□□□□ -0.55
SRSF1-207ENST00000584668 HTRA3P83110 453 aa11.62□□□□□ -0.55
SRSF1-207ENST00000584668 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
SRSF1-207ENST00000584668 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
SRSF1-207ENST00000584668 AFDNP55196 1824 aaKnown RBP11.61□□□□□ -0.55
SRSF1-207ENST00000584668 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
SRSF1-207ENST00000584668 KCNA3P22001 575 aa11.61□□□□□ -0.55
SRSF1-207ENST00000584668 CARD14Q9BXL6 1004 aa11.61□□□□□ -0.55
SRSF1-207ENST00000584668 POLKQ9UBT6 870 aa11.61□□□□□ -0.55
SRSF1-207ENST00000584668 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
SRSF1-207ENST00000584668 HSPA1AP0DMV8 641 aaKnown RBP11.6□□□□□ -0.55
SRSF1-207ENST00000584668 HSPA1BP0DMV9 641 aaKnown RBP11.6□□□□□ -0.55
SRSF1-207ENST00000584668 FKBP8Q14318 412 aa11.6□□□□□ -0.55
SRSF1-207ENST00000584668 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
SRSF1-207ENST00000584668 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
SRSF1-207ENST00000584668 VIRMAQ69YN4 1812 aaKnown RBP11.6□□□□□ -0.55
SRSF1-207ENST00000584668 GLTPD2A6NH11 291 aa11.59□□□□□ -0.55
SRSF1-207ENST00000584668 POLRMTO00411 1230 aaKnown RBP11.59□□□□□ -0.55
SRSF1-207ENST00000584668 CHRNA5P30532 468 aa11.59□□□□□ -0.55
SRSF1-207ENST00000584668 NRXN2Q9P2S2 1712 aa11.59□□□□□ -0.55
SRSF1-207ENST00000584668 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.55
SRSF1-207ENST00000584668 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
SRSF1-207ENST00000584668 DDR1Q08345 913 aa11.58□□□□□ -0.56
SRSF1-207ENST00000584668 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms