RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PGBD3Q8N328 593 aa9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 GRIP2Q9C0E4 1043 aa9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 GPAMQ9HCL2 828 aa9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 ENAMQ9NRM1 1142 aa9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 NSFL1CQ9UNZ2 370 aaKnown RBP9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 ADAMTS8Q9UP79 889 aa9.24□□□□□ -0.93
SMCHD1-205ENST00000581383 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-205ENST00000581383 DNMT3AQ9Y6K1 912 aaPredicted RBP9.23□□□□□ -0.93
SMCHD1-205ENST00000581383 RAD21O60216 631 aa9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 F11P03951 625 aa9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 SRSF11Q05519 484 aaKnown RBP9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 IRF5Q13568 498 aa9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 DBN1Q16643 649 aa9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 ZNF385CQ66K41 422 aaPredicted RBP9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 POM121Q96HA1 1249 aa9.22□□□□□ -0.93
SMCHD1-205ENST00000581383 IL2RAP01589 272 aa9.21□□□□□ -0.94
SMCHD1-205ENST00000581383 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
SMCHD1-205ENST00000581383 MBIPQ9NS73 344 aa9.21□□□□□ -0.94
SMCHD1-205ENST00000581383 A6NJR5 290 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 SPATA31C2B4DYI2 1134 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 MX2P20592 715 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 TLR1Q15399 786 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 TSGA10IPQ3SY00 556 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 NEDD1Q8NHV4 660 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
SMCHD1-205ENST00000581383 SLURP2P0DP57 97 aa9.19□□□□□ -0.94
SMCHD1-205ENST00000581383 SOX11P35716 441 aa9.19□□□□□ -0.94
SMCHD1-205ENST00000581383 A0A1B0GTH6 734 aa9.18□□□□□ -0.94
SMCHD1-205ENST00000581383 FOXK2Q01167 660 aa9.18□□□□□ -0.94
SMCHD1-205ENST00000581383 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
SMCHD1-205ENST00000581383 PLPP7Q8NBV4 271 aa9.18□□□□□ -0.94
SMCHD1-205ENST00000581383 XAGE2Q96GT9 111 aa9.18□□□□□ -0.94
SMCHD1-205ENST00000581383 PHF24Q9UPV7 400 aa9.18□□□□□ -0.94
SMCHD1-205ENST00000581383 IGF1RP08069 1367 aa9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 EFHC2Q5JST6 749 aa9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 LYPD4Q6UWN0 246 aa9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 SCARF2Q96GP6 870 aaPredicted RBP9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
SMCHD1-205ENST00000581383 ARID3CA6NKF2 412 aa9.16□□□□□ -0.94
SMCHD1-205ENST00000581383 PSME1Q06323 249 aa9.16□□□□□ -0.94
SMCHD1-205ENST00000581383 GAS6Q14393 721 aa9.16□□□□□ -0.94
SMCHD1-205ENST00000581383 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
SMCHD1-205ENST00000581383 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 CELA2BP08218 269 aaPredicted RBP9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 IRS1P35568 1242 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 GDF10P55107 478 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 RHBDD1Q8TEB9 315 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 RUBCNLQ9H714 662 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 ETNK1Q9HBU6 452 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
SMCHD1-205ENST00000581383 SKIP12755 728 aa9.14□□□□□ -0.95
SMCHD1-205ENST00000581383 PLA2G4AP47712 749 aa9.14□□□□□ -0.95
SMCHD1-205ENST00000581383 EML3Q32P44 896 aa9.14□□□□□ -0.95
SMCHD1-205ENST00000581383 C4orf17Q53FE4 359 aa9.14□□□□□ -0.95
SMCHD1-205ENST00000581383 TBC1D9Q6ZT07 1266 aa9.14□□□□□ -0.95
SMCHD1-205ENST00000581383 PSMG3-AS1Q96PY0 264 aa9.14□□□□□ -0.95
SMCHD1-205ENST00000581383 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
SMCHD1-205ENST00000581383 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
SMCHD1-205ENST00000581383 BCRP11274 1271 aa9.12□□□□□ -0.95
SMCHD1-205ENST00000581383 MSX1P28360 303 aa9.12□□□□□ -0.95
SMCHD1-205ENST00000581383 NIFKQ9BYG3 293 aaKnown RBP9.12□□□□□ -0.95
SMCHD1-205ENST00000581383 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 ADAM23O75077 832 aa9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 INHAP05111 366 aa9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 MAP2K3P46734 347 aa9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 ARSJQ5FYB0 599 aaPredicted RBP9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 FHDC1Q9C0D6 1143 aaPredicted RBP9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 ZNF777Q9ULD5 760 aaPredicted RBP9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 NOD1Q9Y239 953 aa9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 GJA3Q9Y6H8 435 aa9.11□□□□□ -0.95
SMCHD1-205ENST00000581383 PHF20L1A8MW92 1017 aa9.1□□□□□ -0.95
SMCHD1-205ENST00000581383 ARHGEF15O94989 841 aa9.1□□□□□ -0.95
SMCHD1-205ENST00000581383 KANK3Q6NY19 840 aa9.1□□□□□ -0.95
SMCHD1-205ENST00000581383 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
SMCHD1-205ENST00000581383 BMP4P12644 408 aa9.09□□□□□ -0.95
SMCHD1-205ENST00000581383 LBRQ14739 615 aaKnown RBP9.09□□□□□ -0.95
SMCHD1-205ENST00000581383 NBPF1Q3BBV0 1214 aa9.09□□□□□ -0.95
SMCHD1-205ENST00000581383 ARID3AQ99856 593 aa9.09□□□□□ -0.95
SMCHD1-205ENST00000581383 RRAGCQ9HB90 399 aa9.09□□□□□ -0.95
SMCHD1-205ENST00000581383 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
SMCHD1-205ENST00000581383 BACH1O14867 736 aa9.08□□□□□ -0.96
SMCHD1-205ENST00000581383 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
SMCHD1-205ENST00000581383 SMTNP53814 917 aa9.08□□□□□ -0.96
SMCHD1-205ENST00000581383 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
SMCHD1-205ENST00000581383 OXCT2Q9BYC2 517 aaPredicted RBP9.08□□□□□ -0.96
SMCHD1-205ENST00000581383 HRH3Q9Y5N1 445 aa9.08□□□□□ -0.96
SMCHD1-205ENST00000581383 PIK3CDO00329 1044 aa9.07□□□□□ -0.96
SMCHD1-205ENST00000581383 AMPD1P23109 780 aa9.07□□□□□ -0.96
SMCHD1-205ENST00000581383 FIGNL1Q6PIW4 674 aa9.07□□□□□ -0.96
SMCHD1-205ENST00000581383 BICDL1Q6ZP65 573 aa9.07□□□□□ -0.96
SMCHD1-205ENST00000581383 ACDQ96AP0 544 aa9.07□□□□□ -0.96
SMCHD1-205ENST00000581383 SCNN1DP51172 638 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms