RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 UBR3Q6ZT12 1888 aa15.74■□□□□ 0.11
ERBB2-210ENST00000580074 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
ERBB2-210ENST00000580074 KDM6AO15550 1401 aaPredicted RBP15.72■□□□□ 0.11
ERBB2-210ENST00000580074 YY1P25490 414 aa15.72■□□□□ 0.11
ERBB2-210ENST00000580074 AKAP4Q5JQC9 854 aa15.72■□□□□ 0.11
ERBB2-210ENST00000580074 COL23A1Q86Y22 540 aaPredicted RBP15.72■□□□□ 0.11
ERBB2-210ENST00000580074 SCN11AQ9UI33 1791 aa15.72■□□□□ 0.11
ERBB2-210ENST00000580074 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
ERBB2-210ENST00000580074 ASAP1Q9ULH1 1129 aa15.71■□□□□ 0.11
ERBB2-210ENST00000580074 GNPATO15228 680 aa15.7■□□□□ 0.1
ERBB2-210ENST00000580074 ATG3Q9NT62 314 aa15.7■□□□□ 0.1
ERBB2-210ENST00000580074 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
ERBB2-210ENST00000580074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.69■□□□□ 0.1
ERBB2-210ENST00000580074 PHF14O94880 888 aa15.69■□□□□ 0.1
ERBB2-210ENST00000580074 ADRA2BP18089 450 aa15.69■□□□□ 0.1
ERBB2-210ENST00000580074 RTCBQ9Y3I0 505 aaKnown RBP15.69■□□□□ 0.1
ERBB2-210ENST00000580074 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
ERBB2-210ENST00000580074 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
ERBB2-210ENST00000580074 MRC1P22897 1456 aa15.68■□□□□ 0.1
ERBB2-210ENST00000580074 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
ERBB2-210ENST00000580074 HMOX1P09601 288 aa15.68■□□□□ 0.1
ERBB2-210ENST00000580074 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
ERBB2-210ENST00000580074 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
ERBB2-210ENST00000580074 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
ERBB2-210ENST00000580074 CNGB1Q14028 1251 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-210ENST00000580074 GPR162Q16538 588 aa15.67■□□□□ 0.1
ERBB2-210ENST00000580074 RC3H1Q5TC82 1133 aaKnown RBP15.67■□□□□ 0.1
ERBB2-210ENST00000580074 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
ERBB2-210ENST00000580074 GAS2L2Q8NHY3 880 aa15.67■□□□□ 0.1
ERBB2-210ENST00000580074 CHD4Q14839 1912 aa15.66■□□□□ 0.1
ERBB2-210ENST00000580074 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
ERBB2-210ENST00000580074 ITPK1Q13572 414 aa15.65■□□□□ 0.1
ERBB2-210ENST00000580074 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
ERBB2-210ENST00000580074 SLC52A2Q9HAB3 445 aa15.65■□□□□ 0.1
ERBB2-210ENST00000580074 CD2APQ9Y5K6 639 aa15.65■□□□□ 0.1
ERBB2-210ENST00000580074 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
ERBB2-210ENST00000580074 TRAPPC3LQ5T215 181 aa15.64■□□□□ 0.09
ERBB2-210ENST00000580074 PELP1Q8IZL8 1130 aaKnown RBP15.64■□□□□ 0.09
ERBB2-210ENST00000580074 ADAMTS7Q9UKP4 1686 aa15.63■□□□□ 0.09
ERBB2-210ENST00000580074 GRIN3BO60391 1043 aa15.63■□□□□ 0.09
ERBB2-210ENST00000580074 PTCD1O75127 700 aaKnown RBP15.63■□□□□ 0.09
ERBB2-210ENST00000580074 NEFMP07197 916 aa15.63■□□□□ 0.09
ERBB2-210ENST00000580074 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
ERBB2-210ENST00000580074 TTC5Q8N0Z6 440 aa15.63■□□□□ 0.09
ERBB2-210ENST00000580074 RNMTO43148 476 aaKnown RBP15.62■□□□□ 0.09
ERBB2-210ENST00000580074 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
ERBB2-210ENST00000580074 RFC4P35249 363 aa15.62■□□□□ 0.09
ERBB2-210ENST00000580074 TEFQ10587 303 aa15.62■□□□□ 0.09
ERBB2-210ENST00000580074 NLGN1Q8N2Q7 840 aa15.62■□□□□ 0.09
ERBB2-210ENST00000580074 TJP1Q07157 1748 aa15.61■□□□□ 0.09
ERBB2-210ENST00000580074 GNAT3A8MTJ3 354 aa15.61■□□□□ 0.09
ERBB2-210ENST00000580074 MTHFSDQ2M296 383 aaKnown RBP15.61■□□□□ 0.09
ERBB2-210ENST00000580074 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
ERBB2-210ENST00000580074 CRKLP46109 303 aaKnown RBP15.59■□□□□ 0.09
ERBB2-210ENST00000580074 VSIG10Q8N0Z9 540 aa15.59■□□□□ 0.09
ERBB2-210ENST00000580074 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
ERBB2-210ENST00000580074 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
ERBB2-210ENST00000580074 RALBP1Q15311 655 aa15.58■□□□□ 0.08
ERBB2-210ENST00000580074 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
ERBB2-210ENST00000580074 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
ERBB2-210ENST00000580074 CCDC87Q9NVE4 849 aa15.58■□□□□ 0.08
ERBB2-210ENST00000580074 UBR2Q8IWV8 1755 aa15.57■□□□□ 0.08
ERBB2-210ENST00000580074 FCHSD2O94868 740 aa15.57■□□□□ 0.08
ERBB2-210ENST00000580074 MMP10P09238 476 aa15.57■□□□□ 0.08
ERBB2-210ENST00000580074 PRKAR2BP31323 418 aa15.57■□□□□ 0.08
ERBB2-210ENST00000580074 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
ERBB2-210ENST00000580074 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
ERBB2-210ENST00000580074 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
ERBB2-210ENST00000580074 ARHGEF1Q92888 912 aaKnown RBP15.56■□□□□ 0.08
ERBB2-210ENST00000580074 TEX13AQ9BXU3 409 aaPredicted RBP15.56■□□□□ 0.08
ERBB2-210ENST00000580074 PNNQ9H307 717 aaKnown RBP15.56■□□□□ 0.08
ERBB2-210ENST00000580074 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
ERBB2-210ENST00000580074 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
ERBB2-210ENST00000580074 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
ERBB2-210ENST00000580074 STARD3NLO95772 234 aa15.55■□□□□ 0.08
ERBB2-210ENST00000580074 NPM2Q86SE8 214 aaKnown RBP15.55■□□□□ 0.08
ERBB2-210ENST00000580074 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
ERBB2-210ENST00000580074 ZPR1O75312 459 aa15.54■□□□□ 0.08
ERBB2-210ENST00000580074 KIF13BQ9NQT8 1826 aa15.54■□□□□ 0.08
ERBB2-210ENST00000580074 SIPA1L3O60292 1781 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-210ENST00000580074 USP42Q9H9J4 1324 aaKnown RBP15.53■□□□□ 0.08
ERBB2-210ENST00000580074 GYS1P13807 737 aa15.53■□□□□ 0.08
ERBB2-210ENST00000580074 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
ERBB2-210ENST00000580074 C10orf71Q711Q0 1435 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 COL15A1P39059 1388 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 A0A087WZG4 1122 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 HTATSF1O43719 755 aaKnown RBP15.52■□□□□ 0.08
ERBB2-210ENST00000580074 TGFB2P61812 414 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 SMIM5Q71RC9 77 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 FMNL2Q96PY5 1086 aa15.52■□□□□ 0.08
ERBB2-210ENST00000580074 SOS1Q07889 1333 aaPredicted RBP15.51■□□□□ 0.07
ERBB2-210ENST00000580074 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
ERBB2-210ENST00000580074 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
ERBB2-210ENST00000580074 HEG1Q9ULI3 1381 aa15.5■□□□□ 0.07
ERBB2-210ENST00000580074 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
ERBB2-210ENST00000580074 INTS5Q6P9B9 1019 aaKnown RBP15.5■□□□□ 0.07
ERBB2-210ENST00000580074 ZNF784Q8NCA9 323 aaPredicted RBP15.5■□□□□ 0.07
ERBB2-210ENST00000580074 BTBD11A6QL63 1104 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms