RNA–Protein interactions for RNA: ENST00000579815.1

CLTC-211, Transcript of clathrin heavy chain, humanhuman

TSL 5

Gene CLTC, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-211ENST00000579815 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
CLTC-211ENST00000579815 LORP23490 312 aaPredicted RBP9.13□□□□□ -0.95
CLTC-211ENST00000579815 FOXD4L5Q5VV16 416 aaPredicted RBP9.13□□□□□ -0.95
CLTC-211ENST00000579815 KIAA0586Q9BVV6 1533 aa9.13□□□□□ -0.95
CLTC-211ENST00000579815 NCOA2Q15596 1464 aa9.13□□□□□ -0.95
CLTC-211ENST00000579815 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
CLTC-211ENST00000579815 PTGIRP43119 386 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 PTSQ03393 145 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 MCM6Q14566 821 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 SLC16A10Q8TF71 515 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 TCOF1Q13428 1488 aaKnown RBP9.12□□□□□ -0.95
CLTC-211ENST00000579815 KIAA0556O60303 1618 aa9.12□□□□□ -0.95
CLTC-211ENST00000579815 NPAS3Q8IXF0 933 aa9.11□□□□□ -0.95
CLTC-211ENST00000579815 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
CLTC-211ENST00000579815 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
CLTC-211ENST00000579815 PTPN23Q9H3S7 1636 aa9.11□□□□□ -0.95
CLTC-211ENST00000579815 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
CLTC-211ENST00000579815 GRIN2AQ12879 1464 aa9.1□□□□□ -0.95
CLTC-211ENST00000579815 TSGA10IPQ3SY00 556 aa9.1□□□□□ -0.95
CLTC-211ENST00000579815 IRF7Q92985 503 aa9.1□□□□□ -0.95
CLTC-211ENST00000579815 CCDC85AQ96PX6 553 aaPredicted RBP9.1□□□□□ -0.95
CLTC-211ENST00000579815 CDCA7Q9BWT1 371 aaPredicted RBP9.1□□□□□ -0.95
CLTC-211ENST00000579815 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
CLTC-211ENST00000579815 HFM1A2PYH4 1435 aa9.1□□□□□ -0.95
CLTC-211ENST00000579815 EPRSP07814 1512 aaKnown RBP9.1□□□□□ -0.95
CLTC-211ENST00000579815 GCC2Q8IWJ2 1684 aa9.1□□□□□ -0.95
CLTC-211ENST00000579815 ERCC6Q03468 1493 aa9.09□□□□□ -0.95
CLTC-211ENST00000579815 MIA2Q96PC5 1412 aa9.09□□□□□ -0.95
CLTC-211ENST00000579815 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
CLTC-211ENST00000579815 VAC14Q08AM6 782 aa9.09□□□□□ -0.95
CLTC-211ENST00000579815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.09□□□□□ -0.95
CLTC-211ENST00000579815 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
CLTC-211ENST00000579815 ACIN1Q9UKV3 1341 aaKnown RBP9.08□□□□□ -0.96
CLTC-211ENST00000579815 SENP3-EIF4A1A0A087X0R7 540 aa9.08□□□□□ -0.96
CLTC-211ENST00000579815 VSIG8P0DPA2 414 aa9.08□□□□□ -0.96
CLTC-211ENST00000579815 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
CLTC-211ENST00000579815 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
CLTC-211ENST00000579815 ZNF608Q9ULD9 1512 aaPredicted RBP9.08□□□□□ -0.96
CLTC-211ENST00000579815 RAPGEF6Q8TEU7 1601 aa9.07□□□□□ -0.96
CLTC-211ENST00000579815 ABL2P42684 1182 aa9.07□□□□□ -0.96
CLTC-211ENST00000579815 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
CLTC-211ENST00000579815 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
CLTC-211ENST00000579815 SYNJ2O15056 1496 aa9.07□□□□□ -0.96
CLTC-211ENST00000579815 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
CLTC-211ENST00000579815 MAGI3Q5TCQ9 1506 aa9.06□□□□□ -0.96
CLTC-211ENST00000579815 DISP1Q96F81 1524 aa9.06□□□□□ -0.96
CLTC-211ENST00000579815 SLC35F4A4IF30 521 aa9.06□□□□□ -0.96
CLTC-211ENST00000579815 POM121Q96HA1 1249 aa9.06□□□□□ -0.96
CLTC-211ENST00000579815 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 APBB1O00213 710 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 STAU1O95793 577 aaKnown RBP9.05□□□□□ -0.96
CLTC-211ENST00000579815 RHOQP17081 205 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 ITGAEP38570 1179 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 KRT76Q01546 638 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 RAB6BQ9NRW1 208 aa9.05□□□□□ -0.96
CLTC-211ENST00000579815 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
CLTC-211ENST00000579815 MEN1O00255 615 aa9.04□□□□□ -0.96
CLTC-211ENST00000579815 TRAK2O60296 914 aa9.04□□□□□ -0.96
CLTC-211ENST00000579815 CUEDC1Q9NWM3 386 aaPredicted RBP9.04□□□□□ -0.96
CLTC-211ENST00000579815 ADCY10Q96PN6 1610 aa9.04□□□□□ -0.96
CLTC-211ENST00000579815 ITSN2Q9NZM3 1697 aa9.04□□□□□ -0.96
CLTC-211ENST00000579815 PRICKLE2Q7Z3G6 844 aa9.03□□□□□ -0.96
CLTC-211ENST00000579815 PHTF2Q8N3S3 785 aa9.03□□□□□ -0.96
CLTC-211ENST00000579815 COG6Q9Y2V7 657 aa9.03□□□□□ -0.96
CLTC-211ENST00000579815 NUP160Q12769 1436 aa9.03□□□□□ -0.96
CLTC-211ENST00000579815 NAIPQ13075 1403 aa9.03□□□□□ -0.96
CLTC-211ENST00000579815 CEP170Q5SW79 1584 aa9.03□□□□□ -0.96
CLTC-211ENST00000579815 CDK13Q14004 1512 aaKnown RBP9.02□□□□□ -0.97
CLTC-211ENST00000579815 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
CLTC-211ENST00000579815 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
CLTC-211ENST00000579815 ARHGEF10LQ9HCE6 1279 aa9.02□□□□□ -0.97
CLTC-211ENST00000579815 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
CLTC-211ENST00000579815 MCCD1P59942 119 aaPredicted RBP9.01□□□□□ -0.97
CLTC-211ENST00000579815 RNFT1Q5M7Z0 435 aa9.01□□□□□ -0.97
CLTC-211ENST00000579815 CARMIL2Q6F5E8 1435 aa9.01□□□□□ -0.97
CLTC-211ENST00000579815 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
CLTC-211ENST00000579815 NUP153P49790 1475 aaKnown RBP9.01□□□□□ -0.97
CLTC-211ENST00000579815 PTPRKQ15262 1439 aa9□□□□□ -0.97
CLTC-211ENST00000579815 ITGA6P23229 1130 aa9□□□□□ -0.97
CLTC-211ENST00000579815 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
CLTC-211ENST00000579815 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
CLTC-211ENST00000579815 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
CLTC-211ENST00000579815 IL2RAP01589 272 aa8.99□□□□□ -0.97
CLTC-211ENST00000579815 VWA5B2Q8N398 1253 aa8.99□□□□□ -0.97
CLTC-211ENST00000579815 PIK3CDO00329 1044 aa8.98□□□□□ -0.97
CLTC-211ENST00000579815 EIF4G2P78344 907 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLTC-211ENST00000579815 CLN3Q13286 438 aa8.98□□□□□ -0.97
CLTC-211ENST00000579815 CYP2U1Q7Z449 544 aa8.98□□□□□ -0.97
CLTC-211ENST00000579815 ZSCAN1Q8NBB4 408 aa8.98□□□□□ -0.97
CLTC-211ENST00000579815 STK17AQ9UEE5 414 aa8.98□□□□□ -0.97
CLTC-211ENST00000579815 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
CLTC-211ENST00000579815 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
CLTC-211ENST00000579815 TROQ12816 1431 aaPredicted RBP8.97□□□□□ -0.97
CLTC-211ENST00000579815 CDC14CA4D256 554 aa8.97□□□□□ -0.97
CLTC-211ENST00000579815 POU4F2Q12837 409 aa8.97□□□□□ -0.97
CLTC-211ENST00000579815 RNF135Q8IUD6 432 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms