RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 HMGB2P26583 209 aaKnown RBP15.89■□□□□ 0.13
SUPT4H1-203ENST00000579289 FSTL1Q12841 308 aa15.89■□□□□ 0.13
SUPT4H1-203ENST00000579289 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
SUPT4H1-203ENST00000579289 KCPQ6ZWJ8 1503 aa15.89■□□□□ 0.13
SUPT4H1-203ENST00000579289 C4AP0C0L4 1744 aa15.88■□□□□ 0.13
SUPT4H1-203ENST00000579289 CARD11Q9BXL7 1154 aa15.88■□□□□ 0.13
SUPT4H1-203ENST00000579289 ZNF831Q5JPB2 1677 aa15.87■□□□□ 0.13
SUPT4H1-203ENST00000579289 GNPATO15228 680 aa15.87■□□□□ 0.13
SUPT4H1-203ENST00000579289 CAPN15O75808 1086 aa15.87■□□□□ 0.13
SUPT4H1-203ENST00000579289 C9orf131Q5VYM1 1079 aa15.87■□□□□ 0.13
SUPT4H1-203ENST00000579289 ARHGAP27Q6ZUM4 889 aa15.87■□□□□ 0.13
SUPT4H1-203ENST00000579289 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
SUPT4H1-203ENST00000579289 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
SUPT4H1-203ENST00000579289 GYS1P13807 737 aa15.86■□□□□ 0.13
SUPT4H1-203ENST00000579289 TNS4Q8IZW8 715 aa15.86■□□□□ 0.13
SUPT4H1-203ENST00000579289 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
SUPT4H1-203ENST00000579289 SBF1O95248 1867 aa15.86■□□□□ 0.13
SUPT4H1-203ENST00000579289 KIF24Q5T7B8 1368 aa15.86■□□□□ 0.13
SUPT4H1-203ENST00000579289 ARHGEF1Q92888 912 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-203ENST00000579289 DCAF5Q96JK2 942 aa15.85■□□□□ 0.13
SUPT4H1-203ENST00000579289 FLT4P35916 1363 aa15.85■□□□□ 0.13
SUPT4H1-203ENST00000579289 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
SUPT4H1-203ENST00000579289 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
SUPT4H1-203ENST00000579289 NEUROD1Q13562 356 aa15.84■□□□□ 0.13
SUPT4H1-203ENST00000579289 FCHSD2O94868 740 aa15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 NLGN1Q8N2Q7 840 aa15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 RRAGCQ9HB90 399 aa15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 ADAMTS7Q9UKP4 1686 aa15.83■□□□□ 0.12
SUPT4H1-203ENST00000579289 ANKRD26Q9UPS8 1709 aa15.82■□□□□ 0.12
SUPT4H1-203ENST00000579289 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
SUPT4H1-203ENST00000579289 ST20-MTHFSA0A0A6YYL1 179 aa15.81■□□□□ 0.12
SUPT4H1-203ENST00000579289 TMF1P82094 1093 aa15.81■□□□□ 0.12
SUPT4H1-203ENST00000579289 RC3H1Q5TC82 1133 aaKnown RBP15.81■□□□□ 0.12
SUPT4H1-203ENST00000579289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.81■□□□□ 0.127e-8■■□□□ 12.6
SUPT4H1-203ENST00000579289 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
SUPT4H1-203ENST00000579289 PHKG2P15735 406 aa15.8■□□□□ 0.12
SUPT4H1-203ENST00000579289 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
SUPT4H1-203ENST00000579289 HSPA1AP0DMV8 641 aaKnown RBP15.79■□□□□ 0.12
SUPT4H1-203ENST00000579289 HSPA1BP0DMV9 641 aaKnown RBP15.79■□□□□ 0.12
SUPT4H1-203ENST00000579289 DDR1Q08345 913 aa15.79■□□□□ 0.12
SUPT4H1-203ENST00000579289 EYA1Q99502 592 aa15.79■□□□□ 0.12
SUPT4H1-203ENST00000579289 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 POTECB2RU33 542 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 ADRA2BP18089 450 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 CARD14Q9BXL6 1004 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 RTCBQ9Y3I0 505 aaKnown RBP15.78■□□□□ 0.12
SUPT4H1-203ENST00000579289 KIF20BQ96Q89 1820 aa15.77■□□□□ 0.11
SUPT4H1-203ENST00000579289 KDM2BQ8NHM5 1336 aa15.76■□□□□ 0.11
SUPT4H1-203ENST00000579289 RNF181Q9P0P0 153 aa15.76■□□□□ 0.11
SUPT4H1-203ENST00000579289 PIM2Q9P1W9 311 aa15.76■□□□□ 0.11
SUPT4H1-203ENST00000579289 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
SUPT4H1-203ENST00000579289 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 SLC34A2O95436 690 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 TM4SF1P30408 202 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 CHRNA5P30532 468 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 FKBP8Q14318 412 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 IFNL2Q8IZJ0 200 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 SMC1BQ8NDV3 1235 aa15.75■□□□□ 0.11
SUPT4H1-203ENST00000579289 DALRD3Q5D0E6 543 aaKnown RBP15.74■□□□□ 0.11
SUPT4H1-203ENST00000579289 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
SUPT4H1-203ENST00000579289 SRP68Q9UHB9 627 aaKnown RBP15.74■□□□□ 0.11
SUPT4H1-203ENST00000579289 PARP3Q9Y6F1 533 aa15.73■□□□□ 0.11
SUPT4H1-203ENST00000579289 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
SUPT4H1-203ENST00000579289 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
SUPT4H1-203ENST00000579289 RASSF7Q02833 373 aa15.72■□□□□ 0.11
SUPT4H1-203ENST00000579289 TJP1Q07157 1748 aa15.71■□□□□ 0.11
SUPT4H1-203ENST00000579289 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
SUPT4H1-203ENST00000579289 ZC3H4Q9UPT8 1303 aaKnown RBP15.71■□□□□ 0.11
SUPT4H1-203ENST00000579289 GLTPD2A6NH11 291 aa15.71■□□□□ 0.11
SUPT4H1-203ENST00000579289 RFC4P35249 363 aa15.71■□□□□ 0.11
SUPT4H1-203ENST00000579289 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
SUPT4H1-203ENST00000579289 INTS5Q6P9B9 1019 aaKnown RBP15.69■□□□□ 0.1
SUPT4H1-203ENST00000579289 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
SUPT4H1-203ENST00000579289 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
SUPT4H1-203ENST00000579289 AFDNP55196 1824 aaKnown RBP15.68■□□□□ 0.1
SUPT4H1-203ENST00000579289 NFKBIEO00221 500 aa15.68■□□□□ 0.1
SUPT4H1-203ENST00000579289 VEGFAP15692 232 aaPredicted RBP15.68■□□□□ 0.1
SUPT4H1-203ENST00000579289 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
SUPT4H1-203ENST00000579289 CRKLP46109 303 aaKnown RBP15.67■□□□□ 0.1
SUPT4H1-203ENST00000579289 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
SUPT4H1-203ENST00000579289 TIAM2Q8IVF5 1701 aa15.67■□□□□ 0.1
SUPT4H1-203ENST00000579289 LMNB1P20700 586 aa15.66■□□□□ 0.1
SUPT4H1-203ENST00000579289 CCDC88AQ3V6T2 1871 aa15.65■□□□□ 0.1
SUPT4H1-203ENST00000579289 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
SUPT4H1-203ENST00000579289 FOXN1O15353 648 aa15.64■□□□□ 0.09
SUPT4H1-203ENST00000579289 SLC24A1O60721 1099 aa15.64■□□□□ 0.09
SUPT4H1-203ENST00000579289 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
SUPT4H1-203ENST00000579289 POTEJP0CG39 1038 aa15.64■□□□□ 0.09
SUPT4H1-203ENST00000579289 CARMIL3Q8ND23 1372 aa15.62■□□□□ 0.09
SUPT4H1-203ENST00000579289 NFIXQ14938 502 aa15.62■□□□□ 0.09
SUPT4H1-203ENST00000579289 SOS1Q07889 1333 aaPredicted RBP15.62■□□□□ 0.09
SUPT4H1-203ENST00000579289 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
SUPT4H1-203ENST00000579289 PTCD1O75127 700 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms