RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 USP17L20D6RJB6 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 MEN1O00255 615 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 INHAP05111 366 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 PSME1Q06323 249 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L24Q0WX57 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
PTPRM-207ENST00000578571 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 SIX5Q8N196 739 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 TPCN2Q8NHX9 752 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 CNKSR1Q969H4 720 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 TRIM47Q96LD4 638 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 ESCO1Q5FWF5 840 aa8.9□□□□□ -0.98
PTPRM-207ENST00000578571 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
PTPRM-207ENST00000578571 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
PTPRM-207ENST00000578571 EIF4G1Q04637 1599 aaKnown RBP8.9□□□□□ -0.99
PTPRM-207ENST00000578571 TTLL8A6PVC2 850 aa8.89□□□□□ -0.99
PTPRM-207ENST00000578571 RNF144AP50876 292 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-207ENST00000578571 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTPRM-207ENST00000578571 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
PTPRM-207ENST00000578571 POLMQ9NP87 494 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-207ENST00000578571 ZNF358Q9NW07 568 aa8.89□□□□□ -0.99
PTPRM-207ENST00000578571 ATG7O95352 703 aa8.88□□□□□ -0.99
PTPRM-207ENST00000578571 SNRPBP14678 240 aaKnown RBP8.88□□□□□ -0.99
PTPRM-207ENST00000578571 CENPCQ03188 943 aa8.88□□□□□ -0.99
PTPRM-207ENST00000578571 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
PTPRM-207ENST00000578571 NLRP3Q96P20 1036 aa8.88□□□□□ -0.99
PTPRM-207ENST00000578571 ARXQ96QS3 562 aa8.88□□□□□ -0.99
PTPRM-207ENST00000578571 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-207ENST00000578571 DNMT3LQ9UJW3 386 aa8.88□□□□□ -0.99
PTPRM-207ENST00000578571 GPC1P35052 558 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 DPYDQ12882 1025 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 ANKMY2Q8IV38 441 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 SLC4A9Q96Q91 983 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 SERTAD1Q9UHV2 236 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 SMARCA4P51532 1647 aa8.87□□□□□ -0.99
PTPRM-207ENST00000578571 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
PTPRM-207ENST00000578571 SFI1A8K8P3 1242 aa8.86□□□□□ -0.99
PTPRM-207ENST00000578571 PPP1R15AO75807 674 aaPredicted RBP8.86□□□□□ -0.99
PTPRM-207ENST00000578571 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
PTPRM-207ENST00000578571 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
PTPRM-207ENST00000578571 CECR2Q9BXF3 1484 aa8.85□□□□□ -0.99
PTPRM-207ENST00000578571 FIGNL2A6NMB9 653 aa8.85□□□□□ -0.99
PTPRM-207ENST00000578571 C11orf95C9JLR9 678 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-207ENST00000578571 SMTNP53814 917 aa8.85□□□□□ -0.99
PTPRM-207ENST00000578571 TLR1Q15399 786 aa8.85□□□□□ -0.99
PTPRM-207ENST00000578571 NOVA2Q9UNW9 492 aaKnown RBP8.85□□□□□ -0.99
PTPRM-207ENST00000578571 M0R2N6 131 aa8.84□□□□□ -0.99
PTPRM-207ENST00000578571 EPHA4P54764 986 aa8.84□□□□□ -0.99
PTPRM-207ENST00000578571 SEC13P55735 322 aa8.84□□□□□ -0.99
PTPRM-207ENST00000578571 MTFR1Q15390 333 aa8.84□□□□□ -0.99
PTPRM-207ENST00000578571 SMARCA2P51531 1590 aa8.83□□□□□ -1
PTPRM-207ENST00000578571 BACH1O14867 736 aa8.83□□□□□ -1
PTPRM-207ENST00000578571 MAN1A2O60476 641 aa8.83□□□□□ -1
PTPRM-207ENST00000578571 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
PTPRM-207ENST00000578571 STK32AQ8WU08 396 aa8.83□□□□□ -1
PTPRM-207ENST00000578571 IQSEC3Q9UPP2 1182 aaPredicted RBP8.83□□□□□ -1
PTPRM-207ENST00000578571 USP3Q9Y6I4 520 aa8.83□□□□□ -1
PTPRM-207ENST00000578571 A6NJY4 79 aa8.82□□□□□ -1
PTPRM-207ENST00000578571 SLC27A3Q5K4L6 730 aa8.82□□□□□ -1
PTPRM-207ENST00000578571 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
PTPRM-207ENST00000578571 TNS4Q8IZW8 715 aa8.82□□□□□ -1
PTPRM-207ENST00000578571 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
PTPRM-207ENST00000578571 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
PTPRM-207ENST00000578571 CC2D2AQ9P2K1 1620 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 SPATA31C2B4DYI2 1134 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 FOXK2Q01167 660 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -1
PTPRM-207ENST00000578571 ZNF787Q6DD87 383 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 PRICKLE2Q7Z3G6 844 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 PPARGC1BQ86YN6 1023 aaKnown RBP8.81□□□□□ -1
PTPRM-207ENST00000578571 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 FAM200AQ8TCP9 573 aa8.81□□□□□ -1
PTPRM-207ENST00000578571 SCHIP1Q9P0W5 487 aaPredicted RBP8.81□□□□□ -1
PTPRM-207ENST00000578571 CDK2AP1O14519 115 aa8.8□□□□□ -1
PTPRM-207ENST00000578571 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
PTPRM-207ENST00000578571 POU4F2Q12837 409 aa8.8□□□□□ -1
PTPRM-207ENST00000578571 TMEM164Q5U3C3 297 aa8.8□□□□□ -1
PTPRM-207ENST00000578571 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
PTPRM-207ENST00000578571 PEG3Q9GZU2 1588 aa8.78□□□□□ -1
PTPRM-207ENST00000578571 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
PTPRM-207ENST00000578571 LGR5O75473 907 aa8.78□□□□□ -1
PTPRM-207ENST00000578571 RHOQP17081 205 aa8.78□□□□□ -1
PTPRM-207ENST00000578571 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
PTPRM-207ENST00000578571 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
PTPRM-207ENST00000578571 NBPF15Q8N660 670 aa8.78□□□□□ -1
PTPRM-207ENST00000578571 RHBDD1Q8TEB9 315 aa8.78□□□□□ -1
PTPRM-207ENST00000578571 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
PTPRM-207ENST00000578571 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
PTPRM-207ENST00000578571 ACIN1Q9UKV3 1341 aaKnown RBP8.78□□□□□ -1
PTPRM-207ENST00000578571 C4orf17Q53FE4 359 aa8.77□□□□□ -1.01
PTPRM-207ENST00000578571 TBCELQ5QJ74 424 aa8.77□□□□□ -1.01
PTPRM-207ENST00000578571 TAS1R3Q7RTX0 852 aa8.77□□□□□ -1.01
PTPRM-207ENST00000578571 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
PTPRM-207ENST00000578571 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1.01
PTPRM-207ENST00000578571 TMEM88BA6NKF7 163 aa8.76□□□□□ -1.01
PTPRM-207ENST00000578571 C21orf2O43822 256 aa8.76□□□□□ -1.01
PTPRM-207ENST00000578571 PTSQ03393 145 aa8.76□□□□□ -1.01
PTPRM-207ENST00000578571 WDR44Q5JSH3 913 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms