RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LRP6O75581 1613 aa23.79■■□□□ 1.4
PRKCA-203ENST00000578063 MS4A1P11836 297 aa23.79■■□□□ 1.4
PRKCA-203ENST00000578063 CRBNQ96SW2 442 aa23.79■■□□□ 1.4
PRKCA-203ENST00000578063 CDCA7Q9BWT1 371 aaPredicted RBP23.79■■□□□ 1.4
PRKCA-203ENST00000578063 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
PRKCA-203ENST00000578063 SPATA31A1Q5TZJ5 1347 aa23.78■■□□□ 1.4
PRKCA-203ENST00000578063 SHANK3Q9BYB0 1731 aa23.78■■□□□ 1.4
PRKCA-203ENST00000578063 WNK3Q9BYP7 1800 aa23.78■■□□□ 1.4
PRKCA-203ENST00000578063 IPO8O15397 1037 aaKnown RBP23.78■■□□□ 1.4
PRKCA-203ENST00000578063 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
PRKCA-203ENST00000578063 MRPL50Q8N5N7 158 aaKnown RBP23.77■■□□□ 1.4
PRKCA-203ENST00000578063 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
PRKCA-203ENST00000578063 C8orf37Q96NL8 207 aa23.77■■□□□ 1.4
PRKCA-203ENST00000578063 UNC5CLQ8IV45 518 aa23.76■■□□□ 1.39
PRKCA-203ENST00000578063 SPATA31A5Q5VU36 1347 aa23.76■■□□□ 1.39
PRKCA-203ENST00000578063 SPATA31A7Q8IWB4 1347 aa23.76■■□□□ 1.39
PRKCA-203ENST00000578063 EIF4A1P60842 406 aaKnown RBP23.75■■□□□ 1.39
PRKCA-203ENST00000578063 NOB1Q9ULX3 412 aaKnown RBP23.75■■□□□ 1.39
PRKCA-203ENST00000578063 HOXB7P09629 217 aa23.74■■□□□ 1.39
PRKCA-203ENST00000578063 MEX3CQ5U5Q3 659 aaKnown RBP23.74■■□□□ 1.39
PRKCA-203ENST00000578063 ATF7IPQ6VMQ6 1270 aa23.74■■□□□ 1.39
PRKCA-203ENST00000578063 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
PRKCA-203ENST00000578063 TNS2Q63HR2 1409 aa23.74■■□□□ 1.39
PRKCA-203ENST00000578063 BCL9LQ86UU0 1499 aa23.73■■□□□ 1.39
PRKCA-203ENST00000578063 DDX54Q8TDD1 881 aaKnown RBP23.73■■□□□ 1.39
PRKCA-203ENST00000578063 ARHGAP45Q92619 1136 aa23.73■■□□□ 1.39
PRKCA-203ENST00000578063 CHMP4AQ9BY43 222 aa23.73■■□□□ 1.39
PRKCA-203ENST00000578063 CCDC9Q9Y3X0 531 aaKnown RBP23.73■■□□□ 1.39
PRKCA-203ENST00000578063 ERVV-2B6SEH9 535 aa23.72■■□□□ 1.39
PRKCA-203ENST00000578063 TRIM27P14373 513 aa23.72■■□□□ 1.39
PRKCA-203ENST00000578063 FTSJ3Q8IY81 847 aaKnown RBP23.72■■□□□ 1.39
PRKCA-203ENST00000578063 DZIP1LQ8IYY4 767 aaKnown RBP23.72■■□□□ 1.39
PRKCA-203ENST00000578063 CABP4P57796 275 aa23.71■■□□□ 1.39
PRKCA-203ENST00000578063 BARGINQ6ZT62 677 aa23.71■■□□□ 1.39
PRKCA-203ENST00000578063 NFATC2IPQ8NCF5 419 aa23.71■■□□□ 1.39
PRKCA-203ENST00000578063 PANK1Q8TE04 598 aa23.71■■□□□ 1.39
PRKCA-203ENST00000578063 VPS72Q15906 364 aa23.7■■□□□ 1.39
PRKCA-203ENST00000578063 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.7■■□□□ 1.38
PRKCA-203ENST00000578063 EXOC5O00471 708 aa23.7■■□□□ 1.38
PRKCA-203ENST00000578063 KCNQ3O43525 872 aa23.7■■□□□ 1.38
PRKCA-203ENST00000578063 CCDC30Q5VVM6 783 aa23.7■■□□□ 1.38
PRKCA-203ENST00000578063 TCERG1O14776 1098 aaKnown RBP23.69■■□□□ 1.38
PRKCA-203ENST00000578063 HEG1Q9ULI3 1381 aa23.69■■□□□ 1.38
PRKCA-203ENST00000578063 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
PRKCA-203ENST00000578063 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
PRKCA-203ENST00000578063 RLBP1P12271 317 aa23.67■■□□□ 1.38
PRKCA-203ENST00000578063 CLUAP1Q96AJ1 413 aa23.67■■□□□ 1.38
PRKCA-203ENST00000578063 CCDC136Q96JN2 1154 aa23.67■■□□□ 1.38
PRKCA-203ENST00000578063 TNNQ9UQP3 1299 aa23.67■■□□□ 1.38
PRKCA-203ENST00000578063 API5Q9BZZ5 524 aaKnown RBP23.67■■□□□ 1.38
PRKCA-203ENST00000578063 USP21Q9UK80 565 aa23.67■■□□□ 1.38
PRKCA-203ENST00000578063 COG6Q9Y2V7 657 aa23.67■■□□□ 1.38
PRKCA-203ENST00000578063 AAMPQ13685 434 aa23.66■■□□□ 1.38
PRKCA-203ENST00000578063 HDGFL1Q5TGJ6 251 aa23.66■■□□□ 1.38
PRKCA-203ENST00000578063 B4GALNT3Q6L9W6 998 aa23.66■■□□□ 1.38
PRKCA-203ENST00000578063 TTC5Q8N0Z6 440 aa23.66■■□□□ 1.38
PRKCA-203ENST00000578063 PTPRCP08575 1304 aa23.66■■□□□ 1.38
PRKCA-203ENST00000578063 MVPQ14764 893 aaKnown RBP23.65■■□□□ 1.38
PRKCA-203ENST00000578063 SLC4A2P04920 1241 aa23.64■■□□□ 1.38
PRKCA-203ENST00000578063 DDB1Q16531 1140 aa23.64■■□□□ 1.38
PRKCA-203ENST00000578063 GIGYF1O75420 1035 aaPredicted RBP23.64■■□□□ 1.37
PRKCA-203ENST00000578063 TOGARAM1Q9Y4F4 1720 aa23.63■■□□□ 1.37
PRKCA-203ENST00000578063 SLC39A6Q13433 755 aa23.63■■□□□ 1.37
PRKCA-203ENST00000578063 ABCC4O15439 1325 aa23.62■■□□□ 1.37
PRKCA-203ENST00000578063 PAPPAQ13219 1627 aa23.61■■□□□ 1.37
PRKCA-203ENST00000578063 FMNL2Q96PY5 1086 aa23.61■■□□□ 1.37
PRKCA-203ENST00000578063 DDX19BQ9UMR2 479 aa23.61■■□□□ 1.37
PRKCA-203ENST00000578063 TMEM57Q8N5G2 664 aa23.6■■□□□ 1.37
PRKCA-203ENST00000578063 TMOD3Q9NYL9 352 aa23.6■■□□□ 1.37
PRKCA-203ENST00000578063 AFF2P51816 1311 aa23.6■■□□□ 1.37
PRKCA-203ENST00000578063 ITPRIPQ8IWB1 547 aa23.59■■□□□ 1.37
PRKCA-203ENST00000578063 RGS12O14924 1447 aa23.59■■□□□ 1.37
PRKCA-203ENST00000578063 EIF2S2P20042 333 aaKnown RBP23.59■■□□□ 1.37
PRKCA-203ENST00000578063 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
PRKCA-203ENST00000578063 ZNF496Q96IT1 587 aaPredicted RBP23.59■■□□□ 1.37
PRKCA-203ENST00000578063 CACNA1FO60840 1977 aa23.58■■□□□ 1.37
PRKCA-203ENST00000578063 FAM98CQ17RN3 349 aaKnown RBP23.57■■□□□ 1.36
PRKCA-203ENST00000578063 SNRPA1P09661 255 aaKnown RBP23.56■■□□□ 1.36
PRKCA-203ENST00000578063 FLIIQ13045 1269 aa23.56■■□□□ 1.36
PRKCA-203ENST00000578063 CHMP4BQ9H444 224 aaKnown RBP23.56■■□□□ 1.36
PRKCA-203ENST00000578063 UBR2Q8IWV8 1755 aa23.56■■□□□ 1.36
PRKCA-203ENST00000578063 DBF4Q9UBU7 674 aaPredicted RBP23.56■■□□□ 1.36
PRKCA-203ENST00000578063 GLI3P10071 1580 aa23.55■■□□□ 1.36
PRKCA-203ENST00000578063 KCPQ6ZWJ8 1503 aa23.55■■□□□ 1.36
PRKCA-203ENST00000578063 ATRNO75882 1429 aa23.55■■□□□ 1.36
PRKCA-203ENST00000578063 G2E3Q7L622 706 aa23.55■■□□□ 1.36
PRKCA-203ENST00000578063 CHPF2Q9P2E5 772 aa23.55■■□□□ 1.36
PRKCA-203ENST00000578063 C5P01031 1676 aa23.54■■□□□ 1.36
PRKCA-203ENST00000578063 BCL9O00512 1426 aa23.54■■□□□ 1.36
PRKCA-203ENST00000578063 THSD7AQ9UPZ6 1657 aa23.53■■□□□ 1.36
PRKCA-203ENST00000578063 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
PRKCA-203ENST00000578063 MARCH10Q8NA82 808 aaPredicted RBP23.53■■□□□ 1.36
PRKCA-203ENST00000578063 TRPC5Q9UL62 973 aaPredicted RBP23.53■■□□□ 1.36
PRKCA-203ENST00000578063 PRAMEF22A3QJZ6 481 aa23.53■■□□□ 1.36
PRKCA-203ENST00000578063 PIGBQ92521 554 aa23.53■■□□□ 1.36
PRKCA-203ENST00000578063 A0A0G2JS52 829 aa23.52■■□□□ 1.36
PRKCA-203ENST00000578063 MYT1Q01538 1121 aa23.52■■□□□ 1.36
PRKCA-203ENST00000578063 FKBP5Q13451 457 aaPredicted RBP23.52■■□□□ 1.36
PRKCA-203ENST00000578063 INTS3Q68E01 1043 aaKnown RBP23.52■■□□□ 1.36
PRKCA-203ENST00000578063 GJD4Q96KN9 370 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms