RNA–Protein interactions for RNA: ENST00000578015.1

PSMD12-204, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 2

Gene PSMD12, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-204ENST00000578015 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
PSMD12-204ENST00000578015 KIF3CO14782 793 aa23■■□□□ 1.27
PSMD12-204ENST00000578015 ITPK1Q13572 414 aa23■■□□□ 1.27
PSMD12-204ENST00000578015 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
PSMD12-204ENST00000578015 ADRA2BP18089 450 aa22.99■■□□□ 1.27
PSMD12-204ENST00000578015 APLP1P51693 650 aa22.99■■□□□ 1.27
PSMD12-204ENST00000578015 ATG3Q9NT62 314 aa22.99■■□□□ 1.27
PSMD12-204ENST00000578015 CICQ96RK0 1608 aaPredicted RBP22.99■■□□□ 1.27
PSMD12-204ENST00000578015 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
PSMD12-204ENST00000578015 HSP90AB1P08238 724 aaKnown RBP22.97■■□□□ 1.27
PSMD12-204ENST00000578015 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
PSMD12-204ENST00000578015 TOMM70O94826 608 aa22.96■■□□□ 1.27
PSMD12-204ENST00000578015 RC3H1Q5TC82 1133 aaKnown RBP22.96■■□□□ 1.27
PSMD12-204ENST00000578015 CCDC87Q9NVE4 849 aa22.96■■□□□ 1.27
PSMD12-204ENST00000578015 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
PSMD12-204ENST00000578015 PXDNLA1KZ92 1463 aa22.95■■□□□ 1.26
PSMD12-204ENST00000578015 POLKQ9UBT6 870 aa22.95■■□□□ 1.26
PSMD12-204ENST00000578015 KIF13BQ9NQT8 1826 aa22.94■■□□□ 1.26
PSMD12-204ENST00000578015 RFC4P35249 363 aa22.93■■□□□ 1.26
PSMD12-204ENST00000578015 ARHGAP27Q6ZUM4 889 aa22.93■■□□□ 1.26
PSMD12-204ENST00000578015 DCAF5Q96JK2 942 aa22.93■■□□□ 1.26
PSMD12-204ENST00000578015 KDRP35968 1356 aa22.92■■□□□ 1.26
PSMD12-204ENST00000578015 CNTNAP4Q9C0A0 1308 aa22.92■■□□□ 1.26
PSMD12-204ENST00000578015 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
PSMD12-204ENST00000578015 RBM42Q9BTD8 480 aaKnown RBP22.92■■□□□ 1.26
PSMD12-204ENST00000578015 PARP3Q9Y6F1 533 aa22.92■■□□□ 1.26
PSMD12-204ENST00000578015 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
PSMD12-204ENST00000578015 ZNF831Q5JPB2 1677 aa22.91■■□□□ 1.26
PSMD12-204ENST00000578015 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
PSMD12-204ENST00000578015 RPS6KA4O75676 772 aa22.9■■□□□ 1.26
PSMD12-204ENST00000578015 FCHSD2O94868 740 aa22.9■■□□□ 1.26
PSMD12-204ENST00000578015 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
PSMD12-204ENST00000578015 PLEKHO1Q53GL0 409 aaPredicted RBP22.9■■□□□ 1.26
PSMD12-204ENST00000578015 GYS1P13807 737 aa22.88■■□□□ 1.25
PSMD12-204ENST00000578015 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
PSMD12-204ENST00000578015 DPEP1P16444 411 aa22.87■■□□□ 1.25
PSMD12-204ENST00000578015 CABP4P57796 275 aa22.87■■□□□ 1.25
PSMD12-204ENST00000578015 C16orf71Q8IYS4 520 aaPredicted RBP22.87■■□□□ 1.25
PSMD12-204ENST00000578015 SLC4A9Q96Q91 983 aa22.86■■□□□ 1.25
PSMD12-204ENST00000578015 TIMELESSQ9UNS1 1208 aa22.86■■□□□ 1.25
PSMD12-204ENST00000578015 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
PSMD12-204ENST00000578015 C4AP0C0L4 1744 aa22.85■■□□□ 1.25
PSMD12-204ENST00000578015 RBM46Q8TBY0 533 aaKnown RBP22.85■■□□□ 1.25
PSMD12-204ENST00000578015 PIM2Q9P1W9 311 aa22.85■■□□□ 1.25
PSMD12-204ENST00000578015 KIAA1551Q9HCM1 1747 aa22.85■■□□□ 1.25
PSMD12-204ENST00000578015 DNAJC5GQ8N7S2 189 aa22.84■■□□□ 1.25
PSMD12-204ENST00000578015 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
PSMD12-204ENST00000578015 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
PSMD12-204ENST00000578015 NMRK2Q9NPI5 230 aa22.83■■□□□ 1.25
PSMD12-204ENST00000578015 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
PSMD12-204ENST00000578015 MTHFSP49914 203 aa22.82■■□□□ 1.24
PSMD12-204ENST00000578015 DALRD3Q5D0E6 543 aaKnown RBP22.82■■□□□ 1.24
PSMD12-204ENST00000578015 C1orf141Q5JVX7 400 aa22.82■■□□□ 1.24
PSMD12-204ENST00000578015 C9orf131Q5VYM1 1079 aa22.82■■□□□ 1.24
PSMD12-204ENST00000578015 FSTL1Q12841 308 aa22.81■■□□□ 1.24
PSMD12-204ENST00000578015 COL5A3P25940 1745 aaPredicted RBP22.81■■□□□ 1.24
PSMD12-204ENST00000578015 KCNA3P22001 575 aa22.8■■□□□ 1.24
PSMD12-204ENST00000578015 PTCD1O75127 700 aaKnown RBP22.79■■□□□ 1.24
PSMD12-204ENST00000578015 CRKLP46109 303 aaKnown RBP22.79■■□□□ 1.24
PSMD12-204ENST00000578015 BRCA1P38398 1863 aaKnown RBP22.79■■□□□ 1.24
PSMD12-204ENST00000578015 ARFGEF1Q9Y6D6 1849 aa22.78■■□□□ 1.24
PSMD12-204ENST00000578015 KDM6AO15550 1401 aaPredicted RBP22.78■■□□□ 1.24
PSMD12-204ENST00000578015 POLR3GLQ9BT43 218 aa22.78■■□□□ 1.24
PSMD12-204ENST00000578015 USP42Q9H9J4 1324 aaKnown RBP22.78■■□□□ 1.24
PSMD12-204ENST00000578015 NFATC2IPQ8NCF5 419 aa22.76■■□□□ 1.23
PSMD12-204ENST00000578015 FKBP8Q14318 412 aa22.75■■□□□ 1.23
PSMD12-204ENST00000578015 RNF181Q9P0P0 153 aa22.75■■□□□ 1.23
PSMD12-204ENST00000578015 MYH14Q7Z406 1995 aaKnown RBP22.75■■□□□ 1.23
PSMD12-204ENST00000578015 KLRG1Q96E93 195 aa22.74■■□□□ 1.23
PSMD12-204ENST00000578015 ZPR1O75312 459 aa22.73■■□□□ 1.23
PSMD12-204ENST00000578015 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
PSMD12-204ENST00000578015 ZC3H4Q9UPT8 1303 aaKnown RBP22.73■■□□□ 1.23
PSMD12-204ENST00000578015 DDR1Q08345 913 aa22.72■■□□□ 1.23
PSMD12-204ENST00000578015 WDR90Q96KV7 1748 aa22.71■■□□□ 1.23
PSMD12-204ENST00000578015 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
PSMD12-204ENST00000578015 JMYQ8N9B5 988 aa22.71■■□□□ 1.23
PSMD12-204ENST00000578015 PANK3Q9H999 370 aa22.71■■□□□ 1.23
PSMD12-204ENST00000578015 POLRMTO00411 1230 aaKnown RBP22.7■■□□□ 1.22
PSMD12-204ENST00000578015 TM4SF1P30408 202 aa22.7■■□□□ 1.22
PSMD12-204ENST00000578015 SULT6B1Q6IMI4 303 aa22.7■■□□□ 1.22
PSMD12-204ENST00000578015 SMC1BQ8NDV3 1235 aa22.7■■□□□ 1.22
PSMD12-204ENST00000578015 KCPQ6ZWJ8 1503 aa22.69■■□□□ 1.22
PSMD12-204ENST00000578015 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
PSMD12-204ENST00000578015 RRAGCQ9HB90 399 aa22.69■■□□□ 1.22
PSMD12-204ENST00000578015 CHRNA5P30532 468 aa22.68■■□□□ 1.22
PSMD12-204ENST00000578015 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
PSMD12-204ENST00000578015 AKAP4Q5JQC9 854 aa22.68■■□□□ 1.22
PSMD12-204ENST00000578015 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
PSMD12-204ENST00000578015 CLSPNQ9HAW4 1339 aa22.67■■□□□ 1.22
PSMD12-204ENST00000578015 TNRC6CQ9HCJ0 1690 aaKnown RBP22.66■■□□□ 1.22
PSMD12-204ENST00000578015 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
PSMD12-204ENST00000578015 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
PSMD12-204ENST00000578015 SLC52A2Q9HAB3 445 aa22.65■■□□□ 1.22
PSMD12-204ENST00000578015 SOS1Q07889 1333 aaPredicted RBP22.64■■□□□ 1.22
PSMD12-204ENST00000578015 LMNB1P20700 586 aa22.64■■□□□ 1.21
PSMD12-204ENST00000578015 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
PSMD12-204ENST00000578015 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
PSMD12-204ENST00000578015 TJP1Q07157 1748 aa22.64■■□□□ 1.21
PSMD12-204ENST00000578015 VEGFAP15692 232 aaPredicted RBP22.63■■□□□ 1.21
PSMD12-204ENST00000578015 HTRA3P83110 453 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms