RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
ATP2A3-215ENST00000576957 LINC00116Q8NCU8 138 aa18.09■□□□□ 0.49
ATP2A3-215ENST00000576957 ERVV-2B6SEH9 535 aa18.08■□□□□ 0.48
ATP2A3-215ENST00000576957 PHF14O94880 888 aa18.08■□□□□ 0.48
ATP2A3-215ENST00000576957 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
ATP2A3-215ENST00000576957 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
ATP2A3-215ENST00000576957 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
ATP2A3-215ENST00000576957 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
ATP2A3-215ENST00000576957 ITPK1Q13572 414 aa18.06■□□□□ 0.48
ATP2A3-215ENST00000576957 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
ATP2A3-215ENST00000576957 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
ATP2A3-215ENST00000576957 DCAF5Q96JK2 942 aa18.06■□□□□ 0.48
ATP2A3-215ENST00000576957 GNPATO15228 680 aa18.05■□□□□ 0.48
ATP2A3-215ENST00000576957 ZNF831Q5JPB2 1677 aa18.04■□□□□ 0.48
ATP2A3-215ENST00000576957 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
ATP2A3-215ENST00000576957 KDRP35968 1356 aa18.04■□□□□ 0.48
ATP2A3-215ENST00000576957 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
ATP2A3-215ENST00000576957 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
ATP2A3-215ENST00000576957 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
ATP2A3-215ENST00000576957 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
ATP2A3-215ENST00000576957 RTCBQ9Y3I0 505 aaKnown RBP18.01■□□□□ 0.47
ATP2A3-215ENST00000576957 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
ATP2A3-215ENST00000576957 ADRA2BP18089 450 aa18■□□□□ 0.47
ATP2A3-215ENST00000576957 CABP4P57796 275 aa18■□□□□ 0.47
ATP2A3-215ENST00000576957 TRAPPC3LQ5T215 181 aa18■□□□□ 0.47
ATP2A3-215ENST00000576957 SLC4A9Q96Q91 983 aa18■□□□□ 0.47
ATP2A3-215ENST00000576957 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
ATP2A3-215ENST00000576957 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
ATP2A3-215ENST00000576957 NLGN1Q8N2Q7 840 aa17.99■□□□□ 0.47
ATP2A3-215ENST00000576957 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
ATP2A3-215ENST00000576957 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
ATP2A3-215ENST00000576957 KDM6AO15550 1401 aaPredicted RBP17.98■□□□□ 0.47
ATP2A3-215ENST00000576957 MMP10P09238 476 aa17.98■□□□□ 0.47
ATP2A3-215ENST00000576957 MTHFSP49914 203 aa17.98■□□□□ 0.47
ATP2A3-215ENST00000576957 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
ATP2A3-215ENST00000576957 RPS6KA4O75676 772 aa17.97■□□□□ 0.47
ATP2A3-215ENST00000576957 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
ATP2A3-215ENST00000576957 ADCY9O60503 1353 aa17.96■□□□□ 0.47
ATP2A3-215ENST00000576957 COL5A3P25940 1745 aaPredicted RBP17.96■□□□□ 0.47
ATP2A3-215ENST00000576957 IL13P35225 146 aa17.96■□□□□ 0.47
ATP2A3-215ENST00000576957 SULT6B1Q6IMI4 303 aa17.96■□□□□ 0.47
ATP2A3-215ENST00000576957 ARHGEF1Q92888 912 aaKnown RBP17.96■□□□□ 0.47
ATP2A3-215ENST00000576957 TGFB2P61812 414 aa17.95■□□□□ 0.46
ATP2A3-215ENST00000576957 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
ATP2A3-215ENST00000576957 RFC4P35249 363 aa17.94■□□□□ 0.46
ATP2A3-215ENST00000576957 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
ATP2A3-215ENST00000576957 NFATC2IPQ8NCF5 419 aa17.94■□□□□ 0.46
ATP2A3-215ENST00000576957 GPBP1L1Q9HC44 474 aaPredicted RBP17.94■□□□□ 0.46
ATP2A3-215ENST00000576957 GYS1P13807 737 aa17.93■□□□□ 0.46
ATP2A3-215ENST00000576957 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
ATP2A3-215ENST00000576957 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
ATP2A3-215ENST00000576957 CCDC87Q9NVE4 849 aa17.92■□□□□ 0.46
ATP2A3-215ENST00000576957 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
ATP2A3-215ENST00000576957 CICQ96RK0 1608 aaPredicted RBP17.91■□□□□ 0.46
ATP2A3-215ENST00000576957 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
ATP2A3-215ENST00000576957 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
ATP2A3-215ENST00000576957 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
ATP2A3-215ENST00000576957 SCN11AQ9UI33 1791 aa17.9■□□□□ 0.46
ATP2A3-215ENST00000576957 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
ATP2A3-215ENST00000576957 PARP3Q9Y6F1 533 aa17.9■□□□□ 0.46
ATP2A3-215ENST00000576957 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
ATP2A3-215ENST00000576957 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
ATP2A3-215ENST00000576957 KIAA1551Q9HCM1 1747 aa17.89■□□□□ 0.46
ATP2A3-215ENST00000576957 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
ATP2A3-215ENST00000576957 N4BP2Q86UW6 1770 aaPredicted RBP17.87■□□□□ 0.45
ATP2A3-215ENST00000576957 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
ATP2A3-215ENST00000576957 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
ATP2A3-215ENST00000576957 BCS1LQ9Y276 419 aa17.87■□□□□ 0.45
ATP2A3-215ENST00000576957 TJP1Q07157 1748 aa17.86■□□□□ 0.45
ATP2A3-215ENST00000576957 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
ATP2A3-215ENST00000576957 USP42Q9H9J4 1324 aaKnown RBP17.86■□□□□ 0.45
ATP2A3-215ENST00000576957 DPEP1P16444 411 aa17.85■□□□□ 0.45
ATP2A3-215ENST00000576957 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
ATP2A3-215ENST00000576957 LGR6Q9HBX8 967 aa17.85■□□□□ 0.45
ATP2A3-215ENST00000576957 MRC1P22897 1456 aa17.84■□□□□ 0.45
ATP2A3-215ENST00000576957 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
ATP2A3-215ENST00000576957 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
ATP2A3-215ENST00000576957 FCHSD2O94868 740 aa17.83■□□□□ 0.44
ATP2A3-215ENST00000576957 HMOX1P09601 288 aa17.83■□□□□ 0.44
ATP2A3-215ENST00000576957 KCNA3P22001 575 aa17.83■□□□□ 0.44
ATP2A3-215ENST00000576957 FKBP8Q14318 412 aa17.83■□□□□ 0.44
ATP2A3-215ENST00000576957 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.44
ATP2A3-215ENST00000576957 BRCA1P38398 1863 aaKnown RBP17.83■□□□□ 0.44
ATP2A3-215ENST00000576957 HSPA6P17066 643 aa17.82■□□□□ 0.44
ATP2A3-215ENST00000576957 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
ATP2A3-215ENST00000576957 ARHGAP27Q6ZUM4 889 aa17.82■□□□□ 0.44
ATP2A3-215ENST00000576957 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
ATP2A3-215ENST00000576957 PIM2Q9P1W9 311 aa17.82■□□□□ 0.44
ATP2A3-215ENST00000576957 NPC1L1Q9UHC9 1359 aa17.81■□□□□ 0.44
ATP2A3-215ENST00000576957 KIF3CO14782 793 aa17.81■□□□□ 0.44
ATP2A3-215ENST00000576957 ZPR1O75312 459 aa17.81■□□□□ 0.44
ATP2A3-215ENST00000576957 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
ATP2A3-215ENST00000576957 TM4SF1P30408 202 aa17.81■□□□□ 0.44
ATP2A3-215ENST00000576957 VSIG10Q8N0Z9 540 aa17.81■□□□□ 0.44
ATP2A3-215ENST00000576957 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
ATP2A3-215ENST00000576957 SOS1Q07889 1333 aaPredicted RBP17.8■□□□□ 0.44
ATP2A3-215ENST00000576957 DDR1Q08345 913 aa17.8■□□□□ 0.44
ATP2A3-215ENST00000576957 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
ATP2A3-215ENST00000576957 CEP350Q5VT06 3117 aa17.8■□□□□ 0.44
ATP2A3-215ENST00000576957 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms