RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
NPLOC4-219ENST00000576713 RGPD5Q99666 1765 aa13.06□□□□□ -0.32
NPLOC4-219ENST00000576713 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
NPLOC4-219ENST00000576713 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-219ENST00000576713 VPS72Q15906 364 aa13.05□□□□□ -0.32
NPLOC4-219ENST00000576713 COG3Q96JB2 828 aa13.05□□□□□ -0.32
NPLOC4-219ENST00000576713 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
NPLOC4-219ENST00000576713 PTGER2P43116 358 aa13.03□□□□□ -0.32
NPLOC4-219ENST00000576713 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-219ENST00000576713 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-219ENST00000576713 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-219ENST00000576713 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
NPLOC4-219ENST00000576713 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
NPLOC4-219ENST00000576713 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
NPLOC4-219ENST00000576713 SPATA31A1Q5TZJ5 1347 aa13.01□□□□□ -0.33
NPLOC4-219ENST00000576713 ABCC6O95255 1503 aa13.01□□□□□ -0.33
NPLOC4-219ENST00000576713 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
NPLOC4-219ENST00000576713 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
NPLOC4-219ENST00000576713 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
NPLOC4-219ENST00000576713 HOXC9P31274 260 aa12.99□□□□□ -0.33
NPLOC4-219ENST00000576713 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-219ENST00000576713 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-219ENST00000576713 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
NPLOC4-219ENST00000576713 WDR17Q8IZU2 1322 aa12.98□□□□□ -0.33
NPLOC4-219ENST00000576713 BRWD3Q6RI45 1802 aa12.98□□□□□ -0.33
NPLOC4-219ENST00000576713 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-219ENST00000576713 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
NPLOC4-219ENST00000576713 IP6K1Q92551 441 aa12.98□□□□□ -0.33
NPLOC4-219ENST00000576713 CRB1P82279 1406 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 ERBB3P21860 1342 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 EVA1CP58658 441 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 HSP90AB2PQ58FF8 381 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 DDX12PQ92771 950 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
NPLOC4-219ENST00000576713 BLMP54132 1417 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 NSD2O96028 1365 aa12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 SNPHO15079 494 aa12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 SEPT12Q8IYM1 358 aa12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 WNK3Q9BYP7 1800 aa12.96□□□□□ -0.33
NPLOC4-219ENST00000576713 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
NPLOC4-219ENST00000576713 FAM208AQ9UK61 1670 aaKnown RBP12.96□□□□□ -0.34
NPLOC4-219ENST00000576713 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
NPLOC4-219ENST00000576713 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
NPLOC4-219ENST00000576713 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-219ENST00000576713 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
NPLOC4-219ENST00000576713 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-219ENST00000576713 AMPHP49418 695 aa12.94□□□□□ -0.34
NPLOC4-219ENST00000576713 FAM182BQ5T319 152 aa12.94□□□□□ -0.34
NPLOC4-219ENST00000576713 TOM1L2Q6ZVM7 507 aa12.94□□□□□ -0.34
NPLOC4-219ENST00000576713 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPLOC4-219ENST00000576713 LRRC37A3O60309 1634 aa12.94□□□□□ -0.34
NPLOC4-219ENST00000576713 FLT4P35916 1363 aa12.94□□□□□ -0.34
NPLOC4-219ENST00000576713 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-219ENST00000576713 OSBPP22059 807 aa12.93□□□□□ -0.34
NPLOC4-219ENST00000576713 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
NPLOC4-219ENST00000576713 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
NPLOC4-219ENST00000576713 INSRP06213 1382 aa12.93□□□□□ -0.34
NPLOC4-219ENST00000576713 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
NPLOC4-219ENST00000576713 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 NUDT7P0C024 238 aa12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 CSB-PGBD3P0DP91 1061 aa12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 DDX10Q13206 875 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 USHBP1Q8N6Y0 703 aa12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 PARP4Q9UKK3 1724 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-219ENST00000576713 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
NPLOC4-219ENST00000576713 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-219ENST00000576713 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
NPLOC4-219ENST00000576713 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
NPLOC4-219ENST00000576713 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
NPLOC4-219ENST00000576713 A0A0G2JS52 829 aa12.9□□□□□ -0.34
NPLOC4-219ENST00000576713 MYT1Q01538 1121 aa12.9□□□□□ -0.34
NPLOC4-219ENST00000576713 MEGF6O75095 1541 aa12.89□□□□□ -0.35
NPLOC4-219ENST00000576713 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-219ENST00000576713 THRAP3Q9Y2W1 955 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-219ENST00000576713 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
NPLOC4-219ENST00000576713 PHF14O94880 888 aa12.88□□□□□ -0.35
NPLOC4-219ENST00000576713 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
NPLOC4-219ENST00000576713 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-219ENST00000576713 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-219ENST00000576713 MTHFSP49914 203 aa12.87□□□□□ -0.35
NPLOC4-219ENST00000576713 PCDHGA10Q9Y5H3 936 aa12.87□□□□□ -0.35
NPLOC4-219ENST00000576713 SHANK3Q9BYB0 1731 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms