RNA–Protein interactions for RNA: ENST00000576585.1

PRPF8-214, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 2,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-214ENST00000576585 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRPF8-214ENST00000576585 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
PRPF8-214ENST00000576585 SDR16C5Q8N3Y7 309 aa16.49■□□□□ 0.23
PRPF8-214ENST00000576585 MICAL1Q8TDZ2 1067 aa16.49■□□□□ 0.23
PRPF8-214ENST00000576585 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
PRPF8-214ENST00000576585 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
PRPF8-214ENST00000576585 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
PRPF8-214ENST00000576585 RGS3P49796 1198 aa16.48■□□□□ 0.23
PRPF8-214ENST00000576585 ARMCX6Q7L4S7 300 aa16.48■□□□□ 0.23
PRPF8-214ENST00000576585 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PRPF8-214ENST00000576585 ZC3H15Q8WU90 426 aaKnown RBP16.48■□□□□ 0.23
PRPF8-214ENST00000576585 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
PRPF8-214ENST00000576585 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
PRPF8-214ENST00000576585 COL16A1Q07092 1604 aaPredicted RBP16.47■□□□□ 0.23
PRPF8-214ENST00000576585 PHLPP1O60346 1717 aa16.46■□□□□ 0.23
PRPF8-214ENST00000576585 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
PRPF8-214ENST00000576585 PDE3BQ13370 1112 aa16.46■□□□□ 0.23
PRPF8-214ENST00000576585 OTUD6BQ8N6M0 293 aa16.46■□□□□ 0.23
PRPF8-214ENST00000576585 NLRP6P59044 892 aa16.45■□□□□ 0.22
PRPF8-214ENST00000576585 KRBA2Q6ZNG9 492 aa16.45■□□□□ 0.22
PRPF8-214ENST00000576585 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
PRPF8-214ENST00000576585 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
PRPF8-214ENST00000576585 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
PRPF8-214ENST00000576585 SLIT3O75094 1523 aa16.44■□□□□ 0.22
PRPF8-214ENST00000576585 USP19O94966 1318 aa16.44■□□□□ 0.22
PRPF8-214ENST00000576585 POLD1P28340 1107 aa16.44■□□□□ 0.22
PRPF8-214ENST00000576585 MED1Q15648 1581 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-214ENST00000576585 CRYBG1Q9Y4K1 1723 aa16.44■□□□□ 0.22
PRPF8-214ENST00000576585 NUTM2GQ5VZR2 741 aa16.44■□□□□ 0.22
PRPF8-214ENST00000576585 RRP7AQ9Y3A4 280 aaKnown RBP16.44■□□□□ 0.22
PRPF8-214ENST00000576585 TCP11L2Q8N4U5 519 aa16.43■□□□□ 0.22
PRPF8-214ENST00000576585 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
PRPF8-214ENST00000576585 CDK12Q9NYV4 1490 aaPredicted RBP16.43■□□□□ 0.22
PRPF8-214ENST00000576585 LONRF3Q496Y0 759 aa16.42■□□□□ 0.22
PRPF8-214ENST00000576585 TSPAN18Q96SJ8 248 aa16.42■□□□□ 0.22
PRPF8-214ENST00000576585 NRDCO43847 1150 aa16.41■□□□□ 0.22
PRPF8-214ENST00000576585 PPFIA4O75335 1185 aa16.41■□□□□ 0.22
PRPF8-214ENST00000576585 PEX14O75381 377 aa16.41■□□□□ 0.22
PRPF8-214ENST00000576585 NBPF9Q3BBW0 867 aa16.41■□□□□ 0.22
PRPF8-214ENST00000576585 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
PRPF8-214ENST00000576585 PLEKHF1Q96S99 279 aa16.41■□□□□ 0.22
PRPF8-214ENST00000576585 NFAT5O94916 1531 aa16.4■□□□□ 0.22
PRPF8-214ENST00000576585 IL13P35225 146 aa16.4■□□□□ 0.22
PRPF8-214ENST00000576585 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
PRPF8-214ENST00000576585 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
PRPF8-214ENST00000576585 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
PRPF8-214ENST00000576585 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
PRPF8-214ENST00000576585 IRF6O14896 467 aa16.39■□□□□ 0.21
PRPF8-214ENST00000576585 GCP02774 474 aa16.38■□□□□ 0.21
PRPF8-214ENST00000576585 CALRP27797 417 aaKnown RBP16.38■□□□□ 0.21
PRPF8-214ENST00000576585 SSFA2P28290 1259 aa16.38■□□□□ 0.21
PRPF8-214ENST00000576585 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
PRPF8-214ENST00000576585 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
PRPF8-214ENST00000576585 GOLIM4O00461 696 aa16.38■□□□□ 0.21
PRPF8-214ENST00000576585 MAP3K19Q56UN5 1328 aa16.38■□□□□ 0.21
PRPF8-214ENST00000576585 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
PRPF8-214ENST00000576585 HMOX1P09601 288 aa16.37■□□□□ 0.21
PRPF8-214ENST00000576585 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
PRPF8-214ENST00000576585 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
PRPF8-214ENST00000576585 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
PRPF8-214ENST00000576585 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
PRPF8-214ENST00000576585 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
PRPF8-214ENST00000576585 TRAK2O60296 914 aa16.36■□□□□ 0.21
PRPF8-214ENST00000576585 MPNDQ8N594 471 aa16.36■□□□□ 0.21
PRPF8-214ENST00000576585 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
PRPF8-214ENST00000576585 CABLES1Q8TDN4 633 aa16.36■□□□□ 0.21
PRPF8-214ENST00000576585 UBA5Q9GZZ9 404 aa16.36■□□□□ 0.21
PRPF8-214ENST00000576585 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
PRPF8-214ENST00000576585 FCHSD2O94868 740 aa16.35■□□□□ 0.21
PRPF8-214ENST00000576585 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
PRPF8-214ENST00000576585 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
PRPF8-214ENST00000576585 STK24Q9Y6E0 443 aa16.35■□□□□ 0.21
PRPF8-214ENST00000576585 PRKAR2BP31323 418 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 HSPA1LP34931 641 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 LTN1O94822 1766 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
PRPF8-214ENST00000576585 ZNF662Q6ZS27 426 aa16.34■□□□□ 0.21
PRPF8-214ENST00000576585 TRMT2AQ8IZ69 625 aaKnown RBP16.34■□□□□ 0.21
PRPF8-214ENST00000576585 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
PRPF8-214ENST00000576585 FOSBP53539 338 aa16.33■□□□□ 0.2
PRPF8-214ENST00000576585 MSH5O43196 834 aa16.33■□□□□ 0.2
PRPF8-214ENST00000576585 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
PRPF8-214ENST00000576585 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.2
PRPF8-214ENST00000576585 CPDO75976 1380 aa16.32■□□□□ 0.2
PRPF8-214ENST00000576585 JCADQ9P266 1359 aa16.32■□□□□ 0.2
PRPF8-214ENST00000576585 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
PRPF8-214ENST00000576585 COL18A1P39060 1754 aa16.32■□□□□ 0.2
PRPF8-214ENST00000576585 AMPHP49418 695 aa16.31■□□□□ 0.2
PRPF8-214ENST00000576585 HDAC1Q13547 482 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-214ENST00000576585 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
PRPF8-214ENST00000576585 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
PRPF8-214ENST00000576585 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
PRPF8-214ENST00000576585 FLT4P35916 1363 aa16.31■□□□□ 0.2
PRPF8-214ENST00000576585 SETDB1Q15047 1291 aa16.3■□□□□ 0.2
PRPF8-214ENST00000576585 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms