RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 A6NJR5 290 aa7.75□□□□□ -1.17
TRIM25-208ENST00000574234 GOLGA2Q08379 1002 aa7.75□□□□□ -1.17
TRIM25-208ENST00000574234 PARP9Q8IXQ6 854 aa7.75□□□□□ -1.17
TRIM25-208ENST00000574234 MARCH10Q8NA82 808 aaPredicted RBP7.75□□□□□ -1.17
TRIM25-208ENST00000574234 CDCA7Q9BWT1 371 aaPredicted RBP7.75□□□□□ -1.17
TRIM25-208ENST00000574234 TNRC6CQ9HCJ0 1690 aaKnown RBP7.75□□□□□ -1.17
TRIM25-208ENST00000574234 PKD1L3Q7Z443 1732 aa7.75□□□□□ -1.17
TRIM25-208ENST00000574234 ZNF827Q17R98 1081 aa7.74□□□□□ -1.17
TRIM25-208ENST00000574234 TNS2Q63HR2 1409 aa7.74□□□□□ -1.17
TRIM25-208ENST00000574234 SPATA31E1Q6ZUB1 1445 aa7.74□□□□□ -1.17
TRIM25-208ENST00000574234 PRR36Q9H6K5 1346 aa7.74□□□□□ -1.17
TRIM25-208ENST00000574234 QRICH2Q9H0J4 1663 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 FXR2P51116 673 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM25-208ENST00000574234 DSG2Q14126 1118 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 NGDNQ8NEJ9 315 aaKnown RBP7.73□□□□□ -1.17
TRIM25-208ENST00000574234 TMEM106CQ9BVX2 250 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 USP19O94966 1318 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 PNPLA7Q6ZV29 1317 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 KIF13BQ9NQT8 1826 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
TRIM25-208ENST00000574234 PDIA4P13667 645 aaKnown RBP7.72□□□□□ -1.17
TRIM25-208ENST00000574234 RBM46Q8TBY0 533 aaKnown RBP7.72□□□□□ -1.17
TRIM25-208ENST00000574234 PRAM1Q96QH2 718 aa7.72□□□□□ -1.17
TRIM25-208ENST00000574234 CD2APQ9Y5K6 639 aa7.72□□□□□ -1.17
TRIM25-208ENST00000574234 TAF1LQ8IZX4 1826 aa7.72□□□□□ -1.17
TRIM25-208ENST00000574234 BRCA1P38398 1863 aaKnown RBP7.72□□□□□ -1.17
TRIM25-208ENST00000574234 SLIT3O75094 1523 aa7.72□□□□□ -1.17
TRIM25-208ENST00000574234 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.17
TRIM25-208ENST00000574234 C5P01031 1676 aa7.71□□□□□ -1.18
TRIM25-208ENST00000574234 TRAK2O60296 914 aa7.71□□□□□ -1.18
TRIM25-208ENST00000574234 FSTL1Q12841 308 aa7.71□□□□□ -1.18
TRIM25-208ENST00000574234 ARFGEF1Q9Y6D6 1849 aa7.71□□□□□ -1.18
TRIM25-208ENST00000574234 C10orf71Q711Q0 1435 aa7.7□□□□□ -1.18
TRIM25-208ENST00000574234 KIAA1551Q9HCM1 1747 aa7.7□□□□□ -1.18
TRIM25-208ENST00000574234 GNPATO15228 680 aa7.7□□□□□ -1.18
TRIM25-208ENST00000574234 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
TRIM25-208ENST00000574234 C14orf93Q9H972 538 aaKnown RBP7.7□□□□□ -1.18
TRIM25-208ENST00000574234 ADGRB1O14514 1584 aa7.7□□□□□ -1.18
TRIM25-208ENST00000574234 USP6P35125 1406 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 WASLO00401 505 aaPredicted RBP7.69□□□□□ -1.18
TRIM25-208ENST00000574234 HSPA1AP0DMV8 641 aaKnown RBP7.69□□□□□ -1.18
TRIM25-208ENST00000574234 HSPA1BP0DMV9 641 aaKnown RBP7.69□□□□□ -1.18
TRIM25-208ENST00000574234 FOXK1P85037 733 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 SAFB2Q14151 953 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRIM25-208ENST00000574234 TOM1L2Q6ZVM7 507 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 CLUAP1Q96AJ1 413 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 PHF12Q96QT6 1004 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 LRRC4BQ9NT99 713 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 WDR17Q8IZU2 1322 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 DOT1LQ8TEK3 1739 aa7.69□□□□□ -1.18
TRIM25-208ENST00000574234 SBF1O95248 1867 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 GRXCR2A6NFK2 248 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 GCP02774 474 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 HTRA3P83110 453 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 NECTIN2Q92692 538 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 POGKQ9P215 609 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 TRPC6Q9Y210 931 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 PXDNLA1KZ92 1463 aa7.68□□□□□ -1.18
TRIM25-208ENST00000574234 N4BP2Q86UW6 1770 aaPredicted RBP7.67□□□□□ -1.18
TRIM25-208ENST00000574234 EXOC5O00471 708 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 OSBPP22059 807 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 FECHP22830 423 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 HIC1Q14526 733 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 ABTB2Q8N961 1025 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 TFCP2L1Q9NZI6 479 aa7.67□□□□□ -1.18
TRIM25-208ENST00000574234 FCHSD2O94868 740 aa7.66□□□□□ -1.18
TRIM25-208ENST00000574234 NLRP13Q86W25 1043 aa7.66□□□□□ -1.18
TRIM25-208ENST00000574234 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
TRIM25-208ENST00000574234 HIRIP3Q9BW71 556 aaPredicted RBP7.66□□□□□ -1.18
TRIM25-208ENST00000574234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM25-208ENST00000574234 CCDC7Q96M83 1385 aa7.66□□□□□ -1.18
TRIM25-208ENST00000574234 VIRMAQ69YN4 1812 aaKnown RBP7.66□□□□□ -1.18
TRIM25-208ENST00000574234 UBR3Q6ZT12 1888 aa7.66□□□□□ -1.18
TRIM25-208ENST00000574234 TNRC18O15417 2968 aaPredicted RBP7.65□□□□□ -1.18
TRIM25-208ENST00000574234 FAM161AQ3B820 660 aa7.65□□□□□ -1.18
TRIM25-208ENST00000574234 PPIP5K1Q6PFW1 1433 aa7.65□□□□□ -1.18
TRIM25-208ENST00000574234 C16orf71Q8IYS4 520 aaPredicted RBP7.65□□□□□ -1.18
TRIM25-208ENST00000574234 CARD10Q9BWT7 1032 aa7.65□□□□□ -1.18
TRIM25-208ENST00000574234 PLEKHG2Q9H7P9 1386 aa7.65□□□□□ -1.18
TRIM25-208ENST00000574234 NMRK2Q9NPI5 230 aa7.65□□□□□ -1.18
TRIM25-208ENST00000574234 TOGARAM1Q9Y4F4 1720 aa7.65□□□□□ -1.18
TRIM25-208ENST00000574234 LTN1O94822 1766 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 FAM208AQ9UK61 1670 aaKnown RBP7.64□□□□□ -1.19
TRIM25-208ENST00000574234 CPSF1Q10570 1443 aaKnown RBP7.64□□□□□ -1.19
TRIM25-208ENST00000574234 IGSF1Q8N6C5 1336 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 MS4A1P11836 297 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 TTLL12Q14166 644 aaPredicted RBP7.64□□□□□ -1.19
TRIM25-208ENST00000574234 RGL3Q3MIN7 710 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 CFAP70Q5T0N1 1121 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 PLPP6Q8IY26 295 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 TMC2Q8TDI7 906 aa7.64□□□□□ -1.19
TRIM25-208ENST00000574234 NUDT16Q96DE0 195 aaKnown RBP7.64□□□□□ -1.19
TRIM25-208ENST00000574234 ACEP12821 1306 aa7.63□□□□□ -1.19
TRIM25-208ENST00000574234 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
TRIM25-208ENST00000574234 MCM6Q14566 821 aa7.63□□□□□ -1.19
TRIM25-208ENST00000574234 GIGYF2Q6Y7W6 1299 aaKnown RBP7.63□□□□□ -1.19
TRIM25-208ENST00000574234 ACSBG1Q96GR2 724 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms