RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
NPLOC4-212ENST00000573328 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
NPLOC4-212ENST00000573328 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-212ENST00000573328 IL13P35225 146 aa13.07□□□□□ -0.32
NPLOC4-212ENST00000573328 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
NPLOC4-212ENST00000573328 KDRP35968 1356 aa13.07□□□□□ -0.32
NPLOC4-212ENST00000573328 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
NPLOC4-212ENST00000573328 CABP4P57796 275 aa13.06□□□□□ -0.32
NPLOC4-212ENST00000573328 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-212ENST00000573328 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-212ENST00000573328 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-212ENST00000573328 HMOX1P09601 288 aa13.05□□□□□ -0.32
NPLOC4-212ENST00000573328 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
NPLOC4-212ENST00000573328 ATG3Q9NT62 314 aa13.05□□□□□ -0.32
NPLOC4-212ENST00000573328 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
NPLOC4-212ENST00000573328 GNPATO15228 680 aa13.04□□□□□ -0.32
NPLOC4-212ENST00000573328 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-212ENST00000573328 GPR162Q16538 588 aa13.04□□□□□ -0.32
NPLOC4-212ENST00000573328 TJP1Q07157 1748 aa13.04□□□□□ -0.32
NPLOC4-212ENST00000573328 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-212ENST00000573328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-212ENST00000573328 SSFA2P28290 1259 aa13.03□□□□□ -0.32
NPLOC4-212ENST00000573328 ITPK1Q13572 414 aa13.03□□□□□ -0.32
NPLOC4-212ENST00000573328 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
NPLOC4-212ENST00000573328 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
NPLOC4-212ENST00000573328 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-212ENST00000573328 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
NPLOC4-212ENST00000573328 UTRNP46939 3433 aa13.02□□□□□ -0.33
NPLOC4-212ENST00000573328 COL3A1P02461 1466 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-212ENST00000573328 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-212ENST00000573328 AKAP4Q5JQC9 854 aa13.01□□□□□ -0.33
NPLOC4-212ENST00000573328 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
NPLOC4-212ENST00000573328 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
NPLOC4-212ENST00000573328 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-212ENST00000573328 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
NPLOC4-212ENST00000573328 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
NPLOC4-212ENST00000573328 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
NPLOC4-212ENST00000573328 MRC1P22897 1456 aa12.99□□□□□ -0.33
NPLOC4-212ENST00000573328 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
NPLOC4-212ENST00000573328 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
NPLOC4-212ENST00000573328 UBR2Q8IWV8 1755 aa12.98□□□□□ -0.33
NPLOC4-212ENST00000573328 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 CNTNAP4Q9C0A0 1308 aa12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
NPLOC4-212ENST00000573328 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
NPLOC4-212ENST00000573328 ADRA2BP18089 450 aa12.95□□□□□ -0.34
NPLOC4-212ENST00000573328 RFC4P35249 363 aa12.95□□□□□ -0.34
NPLOC4-212ENST00000573328 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-212ENST00000573328 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-212ENST00000573328 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 RPS6KA4O75676 772 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 MMP10P09238 476 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
NPLOC4-212ENST00000573328 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
NPLOC4-212ENST00000573328 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
NPLOC4-212ENST00000573328 TEFQ10587 303 aa12.93□□□□□ -0.34
NPLOC4-212ENST00000573328 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
NPLOC4-212ENST00000573328 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
NPLOC4-212ENST00000573328 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 DNAJC10Q8IXB1 793 aa12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 ZNF784Q8NCA9 323 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-212ENST00000573328 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-212ENST00000573328 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-212ENST00000573328 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-212ENST00000573328 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
NPLOC4-212ENST00000573328 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
NPLOC4-212ENST00000573328 GYS1P13807 737 aa12.9□□□□□ -0.34
NPLOC4-212ENST00000573328 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
NPLOC4-212ENST00000573328 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-212ENST00000573328 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
NPLOC4-212ENST00000573328 RSPH6AQ9H0K4 717 aa12.89□□□□□ -0.35
NPLOC4-212ENST00000573328 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-212ENST00000573328 ARFGEF1Q9Y6D6 1849 aa12.88□□□□□ -0.35
NPLOC4-212ENST00000573328 ZPR1O75312 459 aa12.88□□□□□ -0.35
NPLOC4-212ENST00000573328 COL15A1P39059 1388 aa12.88□□□□□ -0.35
NPLOC4-212ENST00000573328 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
NPLOC4-212ENST00000573328 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 NEFMP07197 916 aa12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 PHACTR3Q96KR7 559 aa12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 ZBTB1Q9Y2K1 713 aa12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 SOS1Q07889 1333 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-212ENST00000573328 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms