RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 ATG3Q9NT62 314 aa22.2■■□□□ 1.14
HCFC1R1-203ENST00000572355 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.14
HCFC1R1-203ENST00000572355 KDRP35968 1356 aa22.19■■□□□ 1.14
HCFC1R1-203ENST00000572355 KIAA1551Q9HCM1 1747 aa22.19■■□□□ 1.14
HCFC1R1-203ENST00000572355 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
HCFC1R1-203ENST00000572355 KIF13BQ9NQT8 1826 aa22.19■■□□□ 1.14
HCFC1R1-203ENST00000572355 COL5A3P25940 1745 aaPredicted RBP22.18■■□□□ 1.14
HCFC1R1-203ENST00000572355 MMP10P09238 476 aa22.18■■□□□ 1.14
HCFC1R1-203ENST00000572355 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
HCFC1R1-203ENST00000572355 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
HCFC1R1-203ENST00000572355 PXDNLA1KZ92 1463 aa22.16■■□□□ 1.14
HCFC1R1-203ENST00000572355 CEP350Q5VT06 3117 aa22.16■■□□□ 1.14
HCFC1R1-203ENST00000572355 RBM42Q9BTD8 480 aaKnown RBP22.15■■□□□ 1.14
HCFC1R1-203ENST00000572355 RTCBQ9Y3I0 505 aaKnown RBP22.15■■□□□ 1.14
HCFC1R1-203ENST00000572355 C4AP0C0L4 1744 aa22.14■■□□□ 1.14
HCFC1R1-203ENST00000572355 PLEKHG2Q9H7P9 1386 aa22.13■■□□□ 1.13
HCFC1R1-203ENST00000572355 HSPA6P17066 643 aa22.12■■□□□ 1.13
HCFC1R1-203ENST00000572355 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
HCFC1R1-203ENST00000572355 KDM6AO15550 1401 aaPredicted RBP22.12■■□□□ 1.13
HCFC1R1-203ENST00000572355 C10orf71Q711Q0 1435 aa22.12■■□□□ 1.13
HCFC1R1-203ENST00000572355 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
HCFC1R1-203ENST00000572355 ERVV-2B6SEH9 535 aa22.1■■□□□ 1.13
HCFC1R1-203ENST00000572355 HSP90AB1P08238 724 aaKnown RBP22.1■■□□□ 1.13
HCFC1R1-203ENST00000572355 ZNF530Q6P9A1 599 aaPredicted RBP22.1■■□□□ 1.13
HCFC1R1-203ENST00000572355 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
HCFC1R1-203ENST00000572355 BCS1LQ9Y276 419 aa22.1■■□□□ 1.13
HCFC1R1-203ENST00000572355 PLEKHO1Q53GL0 409 aaPredicted RBP22.09■■□□□ 1.13
HCFC1R1-203ENST00000572355 IFFO2Q5TF58 517 aa22.09■■□□□ 1.13
HCFC1R1-203ENST00000572355 BRCA1P38398 1863 aaKnown RBP22.09■■□□□ 1.13
HCFC1R1-203ENST00000572355 CNTNAP4Q9C0A0 1308 aa22.08■■□□□ 1.13
HCFC1R1-203ENST00000572355 A0A0G2JLW4 131 aa22.08■■□□□ 1.13
HCFC1R1-203ENST00000572355 NLGN1Q8N2Q7 840 aa22.08■■□□□ 1.13
HCFC1R1-203ENST00000572355 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
HCFC1R1-203ENST00000572355 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
HCFC1R1-203ENST00000572355 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.12
HCFC1R1-203ENST00000572355 KIF3CO14782 793 aa22.07■■□□□ 1.12
HCFC1R1-203ENST00000572355 RFC4P35249 363 aa22.07■■□□□ 1.12
HCFC1R1-203ENST00000572355 CABP4P57796 275 aa22.07■■□□□ 1.12
HCFC1R1-203ENST00000572355 TGFB2P61812 414 aa22.07■■□□□ 1.12
HCFC1R1-203ENST00000572355 GYS1P13807 737 aa22.06■■□□□ 1.12
HCFC1R1-203ENST00000572355 ADRA2BP18089 450 aa22.06■■□□□ 1.12
HCFC1R1-203ENST00000572355 RC3H1Q5TC82 1133 aaKnown RBP22.06■■□□□ 1.12
HCFC1R1-203ENST00000572355 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
HCFC1R1-203ENST00000572355 TJP1Q07157 1748 aa22.06■■□□□ 1.12
HCFC1R1-203ENST00000572355 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
HCFC1R1-203ENST00000572355 AEBP1Q8IUX7 1158 aa22.05■■□□□ 1.12
HCFC1R1-203ENST00000572355 PANK3Q9H999 370 aa22.05■■□□□ 1.12
HCFC1R1-203ENST00000572355 PARP3Q9Y6F1 533 aa22.05■■□□□ 1.12
HCFC1R1-203ENST00000572355 PTCD1O75127 700 aaKnown RBP22.04■■□□□ 1.12
HCFC1R1-203ENST00000572355 DPEP1P16444 411 aa22.04■■□□□ 1.12
HCFC1R1-203ENST00000572355 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
HCFC1R1-203ENST00000572355 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
HCFC1R1-203ENST00000572355 FCHSD2O94868 740 aa22.03■■□□□ 1.12
HCFC1R1-203ENST00000572355 MTHFSP49914 203 aa22.03■■□□□ 1.12
HCFC1R1-203ENST00000572355 ARHGAP27Q6ZUM4 889 aa22.03■■□□□ 1.12
HCFC1R1-203ENST00000572355 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
HCFC1R1-203ENST00000572355 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
HCFC1R1-203ENST00000572355 HSPA5P11021 654 aaKnown RBP22.01■■□□□ 1.11
HCFC1R1-203ENST00000572355 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
HCFC1R1-203ENST00000572355 CRKLP46109 303 aaKnown RBP22■■□□□ 1.11
HCFC1R1-203ENST00000572355 MORC1Q86VD1 984 aa22■■□□□ 1.11
HCFC1R1-203ENST00000572355 SRP68Q9UHB9 627 aaKnown RBP22■■□□□ 1.11
HCFC1R1-203ENST00000572355 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
HCFC1R1-203ENST00000572355 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
HCFC1R1-203ENST00000572355 SULT6B1Q6IMI4 303 aa21.98■■□□□ 1.11
HCFC1R1-203ENST00000572355 NMRK2Q9NPI5 230 aa21.97■■□□□ 1.11
HCFC1R1-203ENST00000572355 USP42Q9H9J4 1324 aaKnown RBP21.97■■□□□ 1.11
HCFC1R1-203ENST00000572355 ADAMTS7Q9UKP4 1686 aa21.97■■□□□ 1.11
HCFC1R1-203ENST00000572355 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
HCFC1R1-203ENST00000572355 TOMM70O94826 608 aa21.96■■□□□ 1.11
HCFC1R1-203ENST00000572355 FKBP8Q14318 412 aa21.96■■□□□ 1.11
HCFC1R1-203ENST00000572355 KCNA3P22001 575 aa21.95■■□□□ 1.1
HCFC1R1-203ENST00000572355 DDR1Q08345 913 aa21.95■■□□□ 1.1
HCFC1R1-203ENST00000572355 C9orf131Q5VYM1 1079 aa21.95■■□□□ 1.1
HCFC1R1-203ENST00000572355 APLP1P51693 650 aa21.94■■□□□ 1.1
HCFC1R1-203ENST00000572355 PIM2Q9P1W9 311 aa21.94■■□□□ 1.1
HCFC1R1-203ENST00000572355 WDR90Q96KV7 1748 aa21.93■■□□□ 1.1
HCFC1R1-203ENST00000572355 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
HCFC1R1-203ENST00000572355 KCPQ6ZWJ8 1503 aa21.91■■□□□ 1.1
HCFC1R1-203ENST00000572355 CHRNA5P30532 468 aa21.91■■□□□ 1.1
HCFC1R1-203ENST00000572355 IL13P35225 146 aa21.91■■□□□ 1.1
HCFC1R1-203ENST00000572355 DALRD3Q5D0E6 543 aaKnown RBP21.91■■□□□ 1.1
HCFC1R1-203ENST00000572355 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
HCFC1R1-203ENST00000572355 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
HCFC1R1-203ENST00000572355 MRC1P22897 1456 aa21.9■■□□□ 1.1
HCFC1R1-203ENST00000572355 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
HCFC1R1-203ENST00000572355 TNRC6CQ9HCJ0 1690 aaKnown RBP21.89■■□□□ 1.1
HCFC1R1-203ENST00000572355 POLRMTO00411 1230 aaKnown RBP21.89■■□□□ 1.09
HCFC1R1-203ENST00000572355 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
HCFC1R1-203ENST00000572355 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
HCFC1R1-203ENST00000572355 SLC52A2Q9HAB3 445 aa21.89■■□□□ 1.09
HCFC1R1-203ENST00000572355 RNF181Q9P0P0 153 aa21.89■■□□□ 1.09
HCFC1R1-203ENST00000572355 SBF1O95248 1867 aa21.88■■□□□ 1.09
HCFC1R1-203ENST00000572355 ZPR1O75312 459 aa21.88■■□□□ 1.09
HCFC1R1-203ENST00000572355 USPL1Q5W0Q7 1092 aa21.88■■□□□ 1.09
HCFC1R1-203ENST00000572355 SOS1Q07889 1333 aaPredicted RBP21.87■■□□□ 1.09
HCFC1R1-203ENST00000572355 LGR6Q9HBX8 967 aa21.87■■□□□ 1.09
HCFC1R1-203ENST00000572355 COL15A1P39059 1388 aa21.87■■□□□ 1.09
HCFC1R1-203ENST00000572355 HMOX1P09601 288 aa21.86■■□□□ 1.09
HCFC1R1-203ENST00000572355 SLC39A6Q13433 755 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms