RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 SLC52A2Q9HAB3 445 aa13.55□□□□□ -0.24
LITAF-207ENST00000571459 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
LITAF-207ENST00000571459 TEFQ10587 303 aa13.54□□□□□ -0.24
LITAF-207ENST00000571459 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
LITAF-207ENST00000571459 PROM2Q8N271 834 aa13.53□□□□□ -0.24
LITAF-207ENST00000571459 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
LITAF-207ENST00000571459 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
LITAF-207ENST00000571459 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
LITAF-207ENST00000571459 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
LITAF-207ENST00000571459 TXNRD1Q16881 649 aa13.52□□□□□ -0.25
LITAF-207ENST00000571459 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.25
LITAF-207ENST00000571459 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
LITAF-207ENST00000571459 KCNQ4P56696 695 aa13.51□□□□□ -0.25
LITAF-207ENST00000571459 LMOD3Q0VAK6 560 aa13.51□□□□□ -0.25
LITAF-207ENST00000571459 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
LITAF-207ENST00000571459 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
LITAF-207ENST00000571459 RGPD3A6NKT7 1758 aaPredicted RBP13.5□□□□□ -0.25
LITAF-207ENST00000571459 RGPD4Q7Z3J3 1758 aa13.5□□□□□ -0.25
LITAF-207ENST00000571459 MRC1P22897 1456 aa13.49□□□□□ -0.25
LITAF-207ENST00000571459 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
LITAF-207ENST00000571459 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
LITAF-207ENST00000571459 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
LITAF-207ENST00000571459 LRRC4BQ9NT99 713 aa13.49□□□□□ -0.25
LITAF-207ENST00000571459 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
LITAF-207ENST00000571459 LY75O60449 1722 aa13.49□□□□□ -0.25
LITAF-207ENST00000571459 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
LITAF-207ENST00000571459 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
LITAF-207ENST00000571459 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
LITAF-207ENST00000571459 SIK1P57059 783 aa13.48□□□□□ -0.25
LITAF-207ENST00000571459 SLC27A3Q5K4L6 730 aa13.48□□□□□ -0.25
LITAF-207ENST00000571459 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
LITAF-207ENST00000571459 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
LITAF-207ENST00000571459 KCNQ3O43525 872 aa13.47□□□□□ -0.25
LITAF-207ENST00000571459 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
LITAF-207ENST00000571459 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
LITAF-207ENST00000571459 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
LITAF-207ENST00000571459 ZNF790Q6PG37 636 aa13.46□□□□□ -0.25
LITAF-207ENST00000571459 RREB1Q92766 1687 aa13.46□□□□□ -0.26
LITAF-207ENST00000571459 NUP188Q5SRE5 1749 aa13.45□□□□□ -0.26
LITAF-207ENST00000571459 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
LITAF-207ENST00000571459 LAS1LQ9Y4W2 734 aaKnown RBP13.45□□□□□ -0.26
LITAF-207ENST00000571459 ITPK1Q13572 414 aa13.44□□□□□ -0.26
LITAF-207ENST00000571459 CCDC27Q2M243 656 aa13.44□□□□□ -0.26
LITAF-207ENST00000571459 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
LITAF-207ENST00000571459 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
LITAF-207ENST00000571459 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
LITAF-207ENST00000571459 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
LITAF-207ENST00000571459 STK32BQ9NY57 414 aa13.43□□□□□ -0.26
LITAF-207ENST00000571459 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
LITAF-207ENST00000571459 TAF1LQ8IZX4 1826 aa13.43□□□□□ -0.26
LITAF-207ENST00000571459 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
LITAF-207ENST00000571459 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
LITAF-207ENST00000571459 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
LITAF-207ENST00000571459 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
LITAF-207ENST00000571459 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
LITAF-207ENST00000571459 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
LITAF-207ENST00000571459 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
LITAF-207ENST00000571459 UBR2Q8IWV8 1755 aa13.42□□□□□ -0.26
LITAF-207ENST00000571459 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
LITAF-207ENST00000571459 CHL1O00533 1208 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
LITAF-207ENST00000571459 SLC15A2Q16348 729 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 DNAJC10Q8IXB1 793 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 NGEFQ8N5V2 710 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
LITAF-207ENST00000571459 C5P01031 1676 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
LITAF-207ENST00000571459 GNAI1P63096 354 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
LITAF-207ENST00000571459 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
LITAF-207ENST00000571459 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
LITAF-207ENST00000571459 WDR63Q8IWG1 891 aa13.39□□□□□ -0.27
LITAF-207ENST00000571459 AK7Q96M32 723 aa13.39□□□□□ -0.27
LITAF-207ENST00000571459 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
LITAF-207ENST00000571459 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
LITAF-207ENST00000571459 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
LITAF-207ENST00000571459 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
LITAF-207ENST00000571459 STARD3NLO95772 234 aa13.38□□□□□ -0.27
LITAF-207ENST00000571459 CYP19A1P11511 503 aaPredicted RBP13.38□□□□□ -0.27
LITAF-207ENST00000571459 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
LITAF-207ENST00000571459 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
LITAF-207ENST00000571459 TJP1Q07157 1748 aa13.38□□□□□ -0.27
LITAF-207ENST00000571459 COL5A3P25940 1745 aaPredicted RBP13.37□□□□□ -0.27
LITAF-207ENST00000571459 GNPATO15228 680 aa13.37□□□□□ -0.27
LITAF-207ENST00000571459 CRKLP46109 303 aaKnown RBP13.37□□□□□ -0.27
LITAF-207ENST00000571459 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
LITAF-207ENST00000571459 SMIM5Q71RC9 77 aa13.37□□□□□ -0.27
LITAF-207ENST00000571459 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
LITAF-207ENST00000571459 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
LITAF-207ENST00000571459 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
LITAF-207ENST00000571459 TSR2Q969E8 191 aaKnown RBP13.36□□□□□ -0.27
LITAF-207ENST00000571459 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
LITAF-207ENST00000571459 IL16Q14005 1332 aa13.36□□□□□ -0.27
LITAF-207ENST00000571459 CNTNAP4Q9C0A0 1308 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms