RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 NMRK2Q9NPI5 230 aa15.84■□□□□ 0.13
CHMP6-202ENST00000571457 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
CHMP6-202ENST00000571457 ITPK1Q13572 414 aa15.83■□□□□ 0.12
CHMP6-202ENST00000571457 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
CHMP6-202ENST00000571457 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
CHMP6-202ENST00000571457 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
CHMP6-202ENST00000571457 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
CHMP6-202ENST00000571457 FCHSD2O94868 740 aa15.82■□□□□ 0.12
CHMP6-202ENST00000571457 ADRA2BP18089 450 aa15.82■□□□□ 0.12
CHMP6-202ENST00000571457 FSTL1Q12841 308 aa15.82■□□□□ 0.12
CHMP6-202ENST00000571457 NCAPD2Q15021 1401 aa15.82■□□□□ 0.12
CHMP6-202ENST00000571457 C10orf71Q711Q0 1435 aa15.82■□□□□ 0.12
CHMP6-202ENST00000571457 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
CHMP6-202ENST00000571457 KLRG1Q96E93 195 aa15.81■□□□□ 0.12
CHMP6-202ENST00000571457 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
CHMP6-202ENST00000571457 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 DPEP1P16444 411 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 JMYQ8N9B5 988 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
CHMP6-202ENST00000571457 PCNTO95613 3336 aa15.79■□□□□ 0.12
CHMP6-202ENST00000571457 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
CHMP6-202ENST00000571457 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
CHMP6-202ENST00000571457 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
CHMP6-202ENST00000571457 EMILIN1Q9Y6C2 1016 aa15.79■□□□□ 0.12
CHMP6-202ENST00000571457 KIAA1551Q9HCM1 1747 aa15.79■□□□□ 0.12
CHMP6-202ENST00000571457 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
CHMP6-202ENST00000571457 PHKG2P15735 406 aa15.78■□□□□ 0.12
CHMP6-202ENST00000571457 RFC4P35249 363 aa15.78■□□□□ 0.12
CHMP6-202ENST00000571457 WASHC2AQ641Q2 1341 aa15.77■□□□□ 0.12
CHMP6-202ENST00000571457 COL13A1Q5TAT6 717 aaPredicted RBP15.77■□□□□ 0.12
CHMP6-202ENST00000571457 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
CHMP6-202ENST00000571457 PIM2Q9P1W9 311 aa15.77■□□□□ 0.12
CHMP6-202ENST00000571457 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
CHMP6-202ENST00000571457 GYS1P13807 737 aa15.76■□□□□ 0.11
CHMP6-202ENST00000571457 EYA1Q99502 592 aa15.76■□□□□ 0.11
CHMP6-202ENST00000571457 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
CHMP6-202ENST00000571457 KDRP35968 1356 aa15.75■□□□□ 0.11
CHMP6-202ENST00000571457 CNTNAP4Q9C0A0 1308 aa15.75■□□□□ 0.11
CHMP6-202ENST00000571457 ERVV-2B6SEH9 535 aa15.75■□□□□ 0.11
CHMP6-202ENST00000571457 RPS6KA4O75676 772 aa15.75■□□□□ 0.11
CHMP6-202ENST00000571457 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
CHMP6-202ENST00000571457 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
CHMP6-202ENST00000571457 ARFGEF1Q9Y6D6 1849 aa15.75■□□□□ 0.11
CHMP6-202ENST00000571457 ZNF831Q5JPB2 1677 aa15.74■□□□□ 0.11
CHMP6-202ENST00000571457 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
CHMP6-202ENST00000571457 HTRA3P83110 453 aa15.74■□□□□ 0.11
CHMP6-202ENST00000571457 TNS4Q8IZW8 715 aa15.74■□□□□ 0.11
CHMP6-202ENST00000571457 DCAF5Q96JK2 942 aa15.74■□□□□ 0.11
CHMP6-202ENST00000571457 RNF181Q9P0P0 153 aa15.74■□□□□ 0.11
CHMP6-202ENST00000571457 CAPN15O75808 1086 aa15.73■□□□□ 0.11
CHMP6-202ENST00000571457 KCNA3P22001 575 aa15.73■□□□□ 0.11
CHMP6-202ENST00000571457 SMC1BQ8NDV3 1235 aa15.73■□□□□ 0.11
CHMP6-202ENST00000571457 KCPQ6ZWJ8 1503 aa15.73■□□□□ 0.11
CHMP6-202ENST00000571457 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
CHMP6-202ENST00000571457 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
CHMP6-202ENST00000571457 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
CHMP6-202ENST00000571457 ANKRD26Q9UPS8 1709 aa15.71■□□□□ 0.11
CHMP6-202ENST00000571457 PRELPP51888 382 aa15.71■□□□□ 0.11
CHMP6-202ENST00000571457 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
CHMP6-202ENST00000571457 TNRC6CQ9HCJ0 1690 aaKnown RBP15.7■□□□□ 0.1
CHMP6-202ENST00000571457 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
CHMP6-202ENST00000571457 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
CHMP6-202ENST00000571457 CABP4P57796 275 aa15.68■□□□□ 0.1
CHMP6-202ENST00000571457 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
CHMP6-202ENST00000571457 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
CHMP6-202ENST00000571457 MYH14Q7Z406 1995 aaKnown RBP15.67■□□□□ 0.1
CHMP6-202ENST00000571457 USP42Q9H9J4 1324 aaKnown RBP15.67■□□□□ 0.1
CHMP6-202ENST00000571457 SBF1O95248 1867 aa15.66■□□□□ 0.1
CHMP6-202ENST00000571457 PTCD1O75127 700 aaKnown RBP15.66■□□□□ 0.1
CHMP6-202ENST00000571457 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
CHMP6-202ENST00000571457 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
CHMP6-202ENST00000571457 FKBP8Q14318 412 aa15.66■□□□□ 0.1
CHMP6-202ENST00000571457 AMOTQ4VCS5 1084 aa15.66■□□□□ 0.1
CHMP6-202ENST00000571457 CHRNA5P30532 468 aa15.65■□□□□ 0.1
CHMP6-202ENST00000571457 DDR1Q08345 913 aa15.65■□□□□ 0.1
CHMP6-202ENST00000571457 ZNF530Q6P9A1 599 aaPredicted RBP15.65■□□□□ 0.1
CHMP6-202ENST00000571457 SRP68Q9UHB9 627 aaKnown RBP15.65■□□□□ 0.1
CHMP6-202ENST00000571457 LMNB1P20700 586 aa15.64■□□□□ 0.09
CHMP6-202ENST00000571457 MTHFSP49914 203 aa15.64■□□□□ 0.09
CHMP6-202ENST00000571457 GLTPD2A6NH11 291 aa15.63■□□□□ 0.09
CHMP6-202ENST00000571457 POLRMTO00411 1230 aaKnown RBP15.63■□□□□ 0.09
CHMP6-202ENST00000571457 ZPR1O75312 459 aa15.63■□□□□ 0.09
CHMP6-202ENST00000571457 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
CHMP6-202ENST00000571457 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
CHMP6-202ENST00000571457 C1orf141Q5JVX7 400 aa15.63■□□□□ 0.09
CHMP6-202ENST00000571457 KDM6AO15550 1401 aaPredicted RBP15.62■□□□□ 0.09
CHMP6-202ENST00000571457 TM4SF1P30408 202 aa15.62■□□□□ 0.09
CHMP6-202ENST00000571457 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
CHMP6-202ENST00000571457 NFATC2IPQ8NCF5 419 aa15.61■□□□□ 0.09
CHMP6-202ENST00000571457 RASSF7Q02833 373 aa15.6■□□□□ 0.09
CHMP6-202ENST00000571457 INTS5Q6P9B9 1019 aaKnown RBP15.59■□□□□ 0.09
CHMP6-202ENST00000571457 TTLL6Q8N841 843 aa15.59■□□□□ 0.09
CHMP6-202ENST00000571457 USPL1Q5W0Q7 1092 aa15.58■□□□□ 0.08
CHMP6-202ENST00000571457 DPY19L2Q6NUT2 758 aa15.58■□□□□ 0.08
CHMP6-202ENST00000571457 NFIXQ14938 502 aa15.56■□□□□ 0.08
CHMP6-202ENST00000571457 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
CHMP6-202ENST00000571457 SOS1Q07889 1333 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms