RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
LITAF-205ENST00000570904 DCAF5Q96JK2 942 aa28.13■■■□□ 2.09
LITAF-205ENST00000570904 ERVV-2B6SEH9 535 aa28.12■■■□□ 2.09
LITAF-205ENST00000570904 NLGN2Q8NFZ4 835 aa28.12■■■□□ 2.09
LITAF-205ENST00000570904 KDRP35968 1356 aa28.11■■■□□ 2.09
LITAF-205ENST00000570904 UBR3Q6ZT12 1888 aa28.11■■■□□ 2.09
LITAF-205ENST00000570904 ATP6V1AP38606 617 aa28.11■■■□□ 2.09
LITAF-205ENST00000570904 MTHFSP49914 203 aa28.11■■■□□ 2.09
LITAF-205ENST00000570904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.1■■■□□ 2.09
LITAF-205ENST00000570904 GOLGB1Q14789 3259 aaKnown RBP28.1■■■□□ 2.09
LITAF-205ENST00000570904 GPR162Q16538 588 aa28.09■■■□□ 2.09
LITAF-205ENST00000570904 C1orf141Q5JVX7 400 aa28.08■■■□□ 2.09
LITAF-205ENST00000570904 GNPATO15228 680 aa28.07■■■□□ 2.08
LITAF-205ENST00000570904 CABP4P57796 275 aa28.07■■■□□ 2.08
LITAF-205ENST00000570904 CNGB1Q14028 1251 aaPredicted RBP28.07■■■□□ 2.08
LITAF-205ENST00000570904 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
LITAF-205ENST00000570904 SSFA2P28290 1259 aa28.06■■■□□ 2.08
LITAF-205ENST00000570904 SLC4A9Q96Q91 983 aa28.06■■■□□ 2.08
LITAF-205ENST00000570904 RBM42Q9BTD8 480 aaKnown RBP28.06■■■□□ 2.08
LITAF-205ENST00000570904 HMOX1P09601 288 aa28.02■■■□□ 2.08
LITAF-205ENST00000570904 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
LITAF-205ENST00000570904 DIAPH1O60610 1272 aaKnown RBP27.99■■■□□ 2.07
LITAF-205ENST00000570904 NFATC2IPQ8NCF5 419 aa27.99■■■□□ 2.07
LITAF-205ENST00000570904 ZNF831Q5JPB2 1677 aa27.98■■■□□ 2.07
LITAF-205ENST00000570904 CHD4Q14839 1912 aa27.98■■■□□ 2.07
LITAF-205ENST00000570904 PTCD1O75127 700 aaKnown RBP27.97■■■□□ 2.07
LITAF-205ENST00000570904 AKAP4Q5JQC9 854 aa27.97■■■□□ 2.07
LITAF-205ENST00000570904 ZNF784Q8NCA9 323 aaPredicted RBP27.97■■■□□ 2.07
LITAF-205ENST00000570904 CD2APQ9Y5K6 639 aa27.97■■■□□ 2.07
LITAF-205ENST00000570904 YBX3P16989 372 aaKnown RBP eCLIP27.96■■■□□ 2.07
LITAF-205ENST00000570904 RTCBQ9Y3I0 505 aaKnown RBP27.96■■■□□ 2.07
LITAF-205ENST00000570904 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.07
LITAF-205ENST00000570904 COL5A3P25940 1745 aaPredicted RBP27.95■■■□□ 2.07
LITAF-205ENST00000570904 SCN11AQ9UI33 1791 aa27.95■■■□□ 2.06
LITAF-205ENST00000570904 CNTNAP4Q9C0A0 1308 aa27.94■■■□□ 2.06
LITAF-205ENST00000570904 RC3H1Q5TC82 1133 aaKnown RBP27.93■■■□□ 2.06
LITAF-205ENST00000570904 LGR6Q9HBX8 967 aa27.93■■■□□ 2.06
LITAF-205ENST00000570904 MTHFSDQ2M296 383 aaKnown RBP27.92■■■□□ 2.06
LITAF-205ENST00000570904 TRAPPC3LQ5T215 181 aa27.92■■■□□ 2.06
LITAF-205ENST00000570904 SLC52A2Q9HAB3 445 aa27.91■■■□□ 2.06
LITAF-205ENST00000570904 RNMTO43148 476 aaKnown RBP27.9■■■□□ 2.06
LITAF-205ENST00000570904 U2SURPO15042 1029 aaKnown RBP27.89■■■□□ 2.06
LITAF-205ENST00000570904 RPS6KA4O75676 772 aa27.89■■■□□ 2.06
LITAF-205ENST00000570904 ARHGEF1Q92888 912 aaKnown RBP27.89■■■□□ 2.06
LITAF-205ENST00000570904 MRC1P22897 1456 aa27.89■■■□□ 2.05
LITAF-205ENST00000570904 MYH14Q7Z406 1995 aaKnown RBP27.88■■■□□ 2.05
LITAF-205ENST00000570904 MMP10P09238 476 aa27.88■■■□□ 2.05
LITAF-205ENST00000570904 ADRA2BP18089 450 aa27.88■■■□□ 2.05
LITAF-205ENST00000570904 TJP1Q07157 1748 aa27.88■■■□□ 2.05
LITAF-205ENST00000570904 GRIN3BO60391 1043 aa27.87■■■□□ 2.05
LITAF-205ENST00000570904 CRKLP46109 303 aaKnown RBP27.87■■■□□ 2.05
LITAF-205ENST00000570904 RFC4P35249 363 aa27.85■■■□□ 2.05
LITAF-205ENST00000570904 SLC39A6Q13433 755 aa27.85■■■□□ 2.05
LITAF-205ENST00000570904 WWC3Q9ULE0 1092 aa27.85■■■□□ 2.05
LITAF-205ENST00000570904 CICQ96RK0 1608 aaPredicted RBP27.85■■■□□ 2.05
LITAF-205ENST00000570904 C4AP0C0L4 1744 aa27.84■■■□□ 2.05
LITAF-205ENST00000570904 VIRMAQ69YN4 1812 aaKnown RBP27.83■■■□□ 2.05
LITAF-205ENST00000570904 GYS1P13807 737 aa27.83■■■□□ 2.05
LITAF-205ENST00000570904 NLGN1Q8N2Q7 840 aa27.83■■■□□ 2.05
LITAF-205ENST00000570904 ADAMTS7Q9UKP4 1686 aa27.83■■■□□ 2.05
LITAF-205ENST00000570904 DNAJC10Q8IXB1 793 aa27.82■■■□□ 2.04
LITAF-205ENST00000570904 SRP68Q9UHB9 627 aaKnown RBP27.8■■■□□ 2.04
LITAF-205ENST00000570904 KCPQ6ZWJ8 1503 aa27.8■■■□□ 2.04
LITAF-205ENST00000570904 INTS5Q6P9B9 1019 aaKnown RBP27.79■■■□□ 2.04
LITAF-205ENST00000570904 CFAP53Q96M91 514 aa27.79■■■□□ 2.04
LITAF-205ENST00000570904 GAS2L2Q8NHY3 880 aa27.77■■■□□ 2.04
LITAF-205ENST00000570904 CCDC87Q9NVE4 849 aa27.77■■■□□ 2.04
LITAF-205ENST00000570904 C10orf71Q711Q0 1435 aa27.76■■■□□ 2.04
LITAF-205ENST00000570904 USP42Q9H9J4 1324 aaKnown RBP27.76■■■□□ 2.03
LITAF-205ENST00000570904 PPP2R1AP30153 589 aa27.76■■■□□ 2.03
LITAF-205ENST00000570904 PXDNLA1KZ92 1463 aa27.76■■■□□ 2.03
LITAF-205ENST00000570904 PARP3Q9Y6F1 533 aa27.75■■■□□ 2.03
LITAF-205ENST00000570904 KIF13BQ9NQT8 1826 aa27.74■■■□□ 2.03
LITAF-205ENST00000570904 GNAT3A8MTJ3 354 aa27.74■■■□□ 2.03
LITAF-205ENST00000570904 CYP19A1P11511 503 aaPredicted RBP27.74■■■□□ 2.03
LITAF-205ENST00000570904 PRKAR2BP31323 418 aa27.74■■■□□ 2.03
LITAF-205ENST00000570904 FKBP8Q14318 412 aa27.74■■■□□ 2.03
LITAF-205ENST00000570904 IL17REQ8NFR9 667 aa27.74■■■□□ 2.03
LITAF-205ENST00000570904 RSPH6AQ9H0K4 717 aa27.73■■■□□ 2.03
LITAF-205ENST00000570904 KIAA1551Q9HCM1 1747 aa27.72■■■□□ 2.03
LITAF-205ENST00000570904 SOS1Q07889 1333 aaPredicted RBP27.72■■■□□ 2.03
LITAF-205ENST00000570904 PHACTR3Q96KR7 559 aa27.72■■■□□ 2.03
LITAF-205ENST00000570904 TEFQ10587 303 aa27.71■■■□□ 2.03
LITAF-205ENST00000570904 TTC5Q8N0Z6 440 aa27.71■■■□□ 2.03
LITAF-205ENST00000570904 NUDCQ9Y266 331 aa27.71■■■□□ 2.03
LITAF-205ENST00000570904 ZBTB1Q9Y2K1 713 aa27.71■■■□□ 2.03
LITAF-205ENST00000570904 UBR2Q8IWV8 1755 aa27.71■■■□□ 2.03
LITAF-205ENST00000570904 VSIG10Q8N0Z9 540 aa27.7■■■□□ 2.02
LITAF-205ENST00000570904 N4BP2Q86UW6 1770 aaPredicted RBP27.7■■■□□ 2.02
LITAF-205ENST00000570904 A0A0G2JLW4 131 aa27.69■■■□□ 2.02
LITAF-205ENST00000570904 TGFB2P61812 414 aa27.69■■■□□ 2.02
LITAF-205ENST00000570904 DDR1Q08345 913 aa27.69■■■□□ 2.02
LITAF-205ENST00000570904 U2AF1L5P0DN76 240 aaPredicted RBP27.68■■■□□ 2.02
LITAF-205ENST00000570904 U2AF1Q01081 240 aaKnown RBP eCLIP27.68■■■□□ 2.02
LITAF-205ENST00000570904 USPL1Q5W0Q7 1092 aa27.68■■■□□ 2.02
LITAF-205ENST00000570904 COL15A1P39059 1388 aa27.68■■■□□ 2.02
LITAF-205ENST00000570904 ATP10DQ9P241 1426 aa27.67■■■□□ 2.02
LITAF-205ENST00000570904 ZPR1O75312 459 aa27.67■■■□□ 2.02
LITAF-205ENST00000570904 DPEP1P16444 411 aa27.67■■■□□ 2.02
LITAF-205ENST00000570904 SIPA1L3O60292 1781 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms