RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 ATG3Q9NT62 314 aa28.62■■■□□ 2.17
RPA1-202ENST00000570451 ERVV-2B6SEH9 535 aa28.61■■■□□ 2.17
RPA1-202ENST00000570451 AMIGO3Q86WK7 504 aa28.61■■■□□ 2.17
RPA1-202ENST00000570451 IL13P35225 146 aa28.6■■■□□ 2.17
RPA1-202ENST00000570451 ITPK1Q13572 414 aa28.6■■■□□ 2.17
RPA1-202ENST00000570451 C1orf141Q5JVX7 400 aa28.6■■■□□ 2.17
RPA1-202ENST00000570451 CC2D1BQ5T0F9 858 aaKnown RBP28.6■■■□□ 2.17
RPA1-202ENST00000570451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.59■■■□□ 2.17
RPA1-202ENST00000570451 UBR3Q6ZT12 1888 aa28.58■■■□□ 2.17
RPA1-202ENST00000570451 CABP4P57796 275 aa28.58■■■□□ 2.17
RPA1-202ENST00000570451 CNGB1Q14028 1251 aaPredicted RBP28.58■■■□□ 2.17
RPA1-202ENST00000570451 RBM42Q9BTD8 480 aaKnown RBP28.58■■■□□ 2.17
RPA1-202ENST00000570451 GNPATO15228 680 aa28.57■■■□□ 2.16
RPA1-202ENST00000570451 MTHFSP49914 203 aa28.57■■■□□ 2.16
RPA1-202ENST00000570451 KDM6AO15550 1401 aaPredicted RBP28.57■■■□□ 2.16
RPA1-202ENST00000570451 SSFA2P28290 1259 aa28.56■■■□□ 2.16
RPA1-202ENST00000570451 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
RPA1-202ENST00000570451 KDRP35968 1356 aa28.54■■■□□ 2.16
RPA1-202ENST00000570451 CHD4Q14839 1912 aa28.51■■■□□ 2.16
RPA1-202ENST00000570451 HMOX1P09601 288 aa28.51■■■□□ 2.15
RPA1-202ENST00000570451 SLC4A9Q96Q91 983 aa28.5■■■□□ 2.15
RPA1-202ENST00000570451 ZNF784Q8NCA9 323 aaPredicted RBP28.49■■■□□ 2.15
RPA1-202ENST00000570451 NFATC2IPQ8NCF5 419 aa28.49■■■□□ 2.15
RPA1-202ENST00000570451 PTCD1O75127 700 aaKnown RBP28.48■■■□□ 2.15
RPA1-202ENST00000570451 DIAPH1O60610 1272 aaKnown RBP28.47■■■□□ 2.15
RPA1-202ENST00000570451 RTCBQ9Y3I0 505 aaKnown RBP28.47■■■□□ 2.15
RPA1-202ENST00000570451 CD2APQ9Y5K6 639 aa28.47■■■□□ 2.15
RPA1-202ENST00000570451 AKAP4Q5JQC9 854 aa28.46■■■□□ 2.15
RPA1-202ENST00000570451 YBX3P16989 372 aaKnown RBP eCLIP28.45■■■□□ 2.145e-7■■□□□ 12.4
RPA1-202ENST00000570451 TRAPPC3LQ5T215 181 aa28.44■■■□□ 2.14
RPA1-202ENST00000570451 ZNF831Q5JPB2 1677 aa28.43■■■□□ 2.14
RPA1-202ENST00000570451 CNTNAP4Q9C0A0 1308 aa28.42■■■□□ 2.14
RPA1-202ENST00000570451 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
RPA1-202ENST00000570451 GRIN3BO60391 1043 aa28.41■■■□□ 2.14
RPA1-202ENST00000570451 RC3H1Q5TC82 1133 aaKnown RBP28.41■■■□□ 2.14
RPA1-202ENST00000570451 SCN11AQ9UI33 1791 aa28.41■■■□□ 2.14
RPA1-202ENST00000570451 COL5A3P25940 1745 aaPredicted RBP28.4■■■□□ 2.14
RPA1-202ENST00000570451 LGR6Q9HBX8 967 aa28.4■■■□□ 2.14
RPA1-202ENST00000570451 U2SURPO15042 1029 aaKnown RBP28.39■■■□□ 2.14
RPA1-202ENST00000570451 MMP10P09238 476 aa28.39■■■□□ 2.14
RPA1-202ENST00000570451 MTHFSDQ2M296 383 aaKnown RBP28.38■■■□□ 2.13
RPA1-202ENST00000570451 ARHGEF1Q92888 912 aaKnown RBP28.38■■■□□ 2.13
RPA1-202ENST00000570451 SLC52A2Q9HAB3 445 aa28.38■■■□□ 2.13
RPA1-202ENST00000570451 WWC3Q9ULE0 1092 aa28.38■■■□□ 2.13
RPA1-202ENST00000570451 RPS6KA4O75676 772 aa28.37■■■□□ 2.13
RPA1-202ENST00000570451 ADRA2BP18089 450 aa28.37■■■□□ 2.13
RPA1-202ENST00000570451 RFC4P35249 363 aa28.37■■■□□ 2.13
RPA1-202ENST00000570451 RNMTO43148 476 aaKnown RBP28.36■■■□□ 2.13
RPA1-202ENST00000570451 CRKLP46109 303 aaKnown RBP28.36■■■□□ 2.13
RPA1-202ENST00000570451 COL3A1P02461 1466 aaPredicted RBP28.35■■■□□ 2.13
RPA1-202ENST00000570451 MYH14Q7Z406 1995 aaKnown RBP28.34■■■□□ 2.13
RPA1-202ENST00000570451 NLGN1Q8N2Q7 840 aa28.34■■■□□ 2.13
RPA1-202ENST00000570451 SLC39A6Q13433 755 aa28.32■■■□□ 2.12
RPA1-202ENST00000570451 TJP1Q07157 1748 aa28.32■■■□□ 2.12
RPA1-202ENST00000570451 GYS1P13807 737 aa28.31■■■□□ 2.12
RPA1-202ENST00000570451 MRC1P22897 1456 aa28.31■■■□□ 2.12
RPA1-202ENST00000570451 CICQ96RK0 1608 aaPredicted RBP28.31■■■□□ 2.12
RPA1-202ENST00000570451 VIRMAQ69YN4 1812 aaKnown RBP28.29■■■□□ 2.12
RPA1-202ENST00000570451 DNAJC10Q8IXB1 793 aa28.29■■■□□ 2.12
RPA1-202ENST00000570451 CFAP53Q96M91 514 aa28.29■■■□□ 2.12
RPA1-202ENST00000570451 C4AP0C0L4 1744 aa28.29■■■□□ 2.12
RPA1-202ENST00000570451 SRP68Q9UHB9 627 aaKnown RBP28.28■■■□□ 2.12
RPA1-202ENST00000570451 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
RPA1-202ENST00000570451 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
RPA1-202ENST00000570451 CCDC87Q9NVE4 849 aa28.26■■■□□ 2.11
RPA1-202ENST00000570451 GAS2L2Q8NHY3 880 aa28.25■■■□□ 2.11
RPA1-202ENST00000570451 ADAMTS7Q9UKP4 1686 aa28.24■■■□□ 2.11
RPA1-202ENST00000570451 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
RPA1-202ENST00000570451 USP42Q9H9J4 1324 aaKnown RBP28.23■■■□□ 2.11
RPA1-202ENST00000570451 GNAT3A8MTJ3 354 aa28.23■■■□□ 2.11
RPA1-202ENST00000570451 PXDNLA1KZ92 1463 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 TEFQ10587 303 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 C10orf71Q711Q0 1435 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 TTC5Q8N0Z6 440 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 A0A0G2JLW4 131 aa28.21■■■□□ 2.11
RPA1-202ENST00000570451 CYP19A1P11511 503 aaPredicted RBP28.21■■■□□ 2.11
RPA1-202ENST00000570451 FKBP8Q14318 412 aa28.21■■■□□ 2.11
RPA1-202ENST00000570451 ZPR1O75312 459 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 GIGYF1O75420 1035 aaPredicted RBP28.2■■■□□ 2.1
RPA1-202ENST00000570451 PPP2R1AP30153 589 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 PRKAR2BP31323 418 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 TGFB2P61812 414 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 NUDCQ9Y266 331 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 KIF13BQ9NQT8 1826 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 N4BP2Q86UW6 1770 aaPredicted RBP28.19■■■□□ 2.1
RPA1-202ENST00000570451 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
RPA1-202ENST00000570451 IL17REQ8NFR9 667 aa28.18■■■□□ 2.1
RPA1-202ENST00000570451 ATP10DQ9P241 1426 aa28.18■■■□□ 2.1
RPA1-202ENST00000570451 USPL1Q5W0Q7 1092 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 VSIG10Q8N0Z9 540 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 PHACTR3Q96KR7 559 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 RSPH6AQ9H0K4 717 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 BCS1LQ9Y276 419 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 ZBTB1Q9Y2K1 713 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
RPA1-202ENST00000570451 DPEP1P16444 411 aa28.16■■■□□ 2.1
RPA1-202ENST00000570451 C1QTNF8P60827 252 aa28.16■■■□□ 2.1
RPA1-202ENST00000570451 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
RPA1-202ENST00000570451 KIAA1551Q9HCM1 1747 aa28.15■■■□□ 2.1
RPA1-202ENST00000570451 DDR1Q08345 913 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms