RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
SNX29-207ENST00000568949 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
SNX29-207ENST00000568949 IFNL2Q8IZJ0 200 aa17.38■□□□□ 0.37
SNX29-207ENST00000568949 BCS1LQ9Y276 419 aa17.38■□□□□ 0.37
SNX29-207ENST00000568949 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
SNX29-207ENST00000568949 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
SNX29-207ENST00000568949 PHKG2P15735 406 aa17.37■□□□□ 0.37
SNX29-207ENST00000568949 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
SNX29-207ENST00000568949 EYA1Q99502 592 aa17.37■□□□□ 0.37
SNX29-207ENST00000568949 ATG3Q9NT62 314 aa17.37■□□□□ 0.37
SNX29-207ENST00000568949 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
SNX29-207ENST00000568949 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
SNX29-207ENST00000568949 C10orf71Q711Q0 1435 aa17.37■□□□□ 0.37
SNX29-207ENST00000568949 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
SNX29-207ENST00000568949 ADRA2BP18089 450 aa17.36■□□□□ 0.37
SNX29-207ENST00000568949 ARHGAP27Q6ZUM4 889 aa17.36■□□□□ 0.37
SNX29-207ENST00000568949 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
SNX29-207ENST00000568949 PLEKHG2Q9H7P9 1386 aa17.36■□□□□ 0.37
SNX29-207ENST00000568949 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
SNX29-207ENST00000568949 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
SNX29-207ENST00000568949 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
SNX29-207ENST00000568949 KDRP35968 1356 aa17.35■□□□□ 0.37
SNX29-207ENST00000568949 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
SNX29-207ENST00000568949 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
SNX29-207ENST00000568949 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
SNX29-207ENST00000568949 BRCA1P38398 1863 aaKnown RBP17.33■□□□□ 0.37
SNX29-207ENST00000568949 DPEP1P16444 411 aa17.33■□□□□ 0.36
SNX29-207ENST00000568949 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.36
SNX29-207ENST00000568949 C4AP0C0L4 1744 aa17.33■□□□□ 0.36
SNX29-207ENST00000568949 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
SNX29-207ENST00000568949 FCHSD2O94868 740 aa17.32■□□□□ 0.36
SNX29-207ENST00000568949 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 WDR90Q96KV7 1748 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 GYS1P13807 737 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 SLC4A9Q96Q91 983 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
SNX29-207ENST00000568949 RFC4P35249 363 aa17.3■□□□□ 0.36
SNX29-207ENST00000568949 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
SNX29-207ENST00000568949 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
SNX29-207ENST00000568949 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
SNX29-207ENST00000568949 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
SNX29-207ENST00000568949 KCNA3P22001 575 aa17.29■□□□□ 0.36
SNX29-207ENST00000568949 FSTL1Q12841 308 aa17.29■□□□□ 0.36
SNX29-207ENST00000568949 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
SNX29-207ENST00000568949 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
SNX29-207ENST00000568949 JMYQ8N9B5 988 aa17.28■□□□□ 0.36
SNX29-207ENST00000568949 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
SNX29-207ENST00000568949 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
SNX29-207ENST00000568949 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
SNX29-207ENST00000568949 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.36
SNX29-207ENST00000568949 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.36
SNX29-207ENST00000568949 DCAF5Q96JK2 942 aa17.27■□□□□ 0.36
SNX29-207ENST00000568949 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
SNX29-207ENST00000568949 PLEKHO1Q53GL0 409 aaPredicted RBP17.24■□□□□ 0.35
SNX29-207ENST00000568949 KCPQ6ZWJ8 1503 aa17.23■□□□□ 0.35
SNX29-207ENST00000568949 CABP4P57796 275 aa17.23■□□□□ 0.35
SNX29-207ENST00000568949 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
SNX29-207ENST00000568949 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
SNX29-207ENST00000568949 CRKLP46109 303 aaKnown RBP17.22■□□□□ 0.35
SNX29-207ENST00000568949 HTRA3P83110 453 aa17.22■□□□□ 0.35
SNX29-207ENST00000568949 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
SNX29-207ENST00000568949 SBF1O95248 1867 aa17.22■□□□□ 0.35
SNX29-207ENST00000568949 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
SNX29-207ENST00000568949 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
SNX29-207ENST00000568949 TNRC6CQ9HCJ0 1690 aaKnown RBP17.21■□□□□ 0.35
SNX29-207ENST00000568949 DDR1Q08345 913 aa17.21■□□□□ 0.35
SNX29-207ENST00000568949 FKBP8Q14318 412 aa17.21■□□□□ 0.35
SNX29-207ENST00000568949 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
SNX29-207ENST00000568949 RRAGCQ9HB90 399 aa17.21■□□□□ 0.35
SNX29-207ENST00000568949 SMC1BQ8NDV3 1235 aa17.2■□□□□ 0.34
SNX29-207ENST00000568949 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
SNX29-207ENST00000568949 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
SNX29-207ENST00000568949 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
SNX29-207ENST00000568949 MTHFSP49914 203 aa17.19■□□□□ 0.34
SNX29-207ENST00000568949 TM4SF1P30408 202 aa17.18■□□□□ 0.34
SNX29-207ENST00000568949 CHRNA5P30532 468 aa17.18■□□□□ 0.34
SNX29-207ENST00000568949 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
SNX29-207ENST00000568949 POLRMTO00411 1230 aaKnown RBP17.17■□□□□ 0.34
SNX29-207ENST00000568949 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
SNX29-207ENST00000568949 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
SNX29-207ENST00000568949 TJP1Q07157 1748 aa17.16■□□□□ 0.34
SNX29-207ENST00000568949 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
SNX29-207ENST00000568949 ADAMTS7Q9UKP4 1686 aa17.16■□□□□ 0.34
SNX29-207ENST00000568949 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
SNX29-207ENST00000568949 ZPR1O75312 459 aa17.14■□□□□ 0.33
SNX29-207ENST00000568949 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
SNX29-207ENST00000568949 LMNB1P20700 586 aa17.13■□□□□ 0.33
SNX29-207ENST00000568949 PRELPP51888 382 aa17.13■□□□□ 0.33
SNX29-207ENST00000568949 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
SNX29-207ENST00000568949 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
SNX29-207ENST00000568949 AEBP1Q8IUX7 1158 aa17.12■□□□□ 0.33
SNX29-207ENST00000568949 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
SNX29-207ENST00000568949 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
SNX29-207ENST00000568949 CAPN15O75808 1086 aa17.11■□□□□ 0.33
SNX29-207ENST00000568949 RASSF7Q02833 373 aa17.11■□□□□ 0.33
SNX29-207ENST00000568949 AFDNP55196 1824 aaKnown RBP17.11■□□□□ 0.33
SNX29-207ENST00000568949 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
SNX29-207ENST00000568949 DLEC1Q9Y238 1755 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms