RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SSFA2P28290 1259 aa20.67■□□□□ 0.9
USB1-214ENST00000568848 POLKQ9UBT6 870 aa20.67■□□□□ 0.9
USB1-214ENST00000568848 KIF24Q5T7B8 1368 aa20.67■□□□□ 0.9
USB1-214ENST00000568848 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
USB1-214ENST00000568848 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
USB1-214ENST00000568848 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
USB1-214ENST00000568848 KDRP35968 1356 aa20.64■□□□□ 0.89
USB1-214ENST00000568848 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.89
USB1-214ENST00000568848 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
USB1-214ENST00000568848 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
USB1-214ENST00000568848 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
USB1-214ENST00000568848 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
USB1-214ENST00000568848 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
USB1-214ENST00000568848 DPEP1P16444 411 aa20.61■□□□□ 0.89
USB1-214ENST00000568848 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
USB1-214ENST00000568848 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
USB1-214ENST00000568848 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
USB1-214ENST00000568848 COL5A3P25940 1745 aaPredicted RBP20.6■□□□□ 0.89
USB1-214ENST00000568848 CDCA8Q53HL2 280 aa20.59■□□□□ 0.89
USB1-214ENST00000568848 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
USB1-214ENST00000568848 ARHGEF1Q92888 912 aaKnown RBP20.59■□□□□ 0.89
USB1-214ENST00000568848 C10orf71Q711Q0 1435 aa20.59■□□□□ 0.89
USB1-214ENST00000568848 HTRA3P83110 453 aa20.58■□□□□ 0.89
USB1-214ENST00000568848 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
USB1-214ENST00000568848 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
USB1-214ENST00000568848 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
USB1-214ENST00000568848 GYS1P13807 737 aa20.57■□□□□ 0.88
USB1-214ENST00000568848 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
USB1-214ENST00000568848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.56■□□□□ 0.88
USB1-214ENST00000568848 BRCA1P38398 1863 aaKnown RBP20.56■□□□□ 0.88
USB1-214ENST00000568848 PTCD1O75127 700 aaKnown RBP20.55■□□□□ 0.88
USB1-214ENST00000568848 FCHSD2O94868 740 aa20.54■□□□□ 0.88
USB1-214ENST00000568848 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
USB1-214ENST00000568848 KCNA3P22001 575 aa20.53■□□□□ 0.88
USB1-214ENST00000568848 TJP1Q07157 1748 aa20.53■□□□□ 0.88
USB1-214ENST00000568848 DDR1Q08345 913 aa20.52■□□□□ 0.88
USB1-214ENST00000568848 FKBP8Q14318 412 aa20.52■□□□□ 0.88
USB1-214ENST00000568848 CHRNA5P30532 468 aa20.51■□□□□ 0.87
USB1-214ENST00000568848 RFC4P35249 363 aa20.51■□□□□ 0.87
USB1-214ENST00000568848 CABP4P57796 275 aa20.51■□□□□ 0.87
USB1-214ENST00000568848 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
USB1-214ENST00000568848 CNTNAP4Q9C0A0 1308 aa20.51■□□□□ 0.87
USB1-214ENST00000568848 RPS6KA4O75676 772 aa20.5■□□□□ 0.87
USB1-214ENST00000568848 TGFB2P61812 414 aa20.5■□□□□ 0.87
USB1-214ENST00000568848 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
USB1-214ENST00000568848 NLGN1Q8N2Q7 840 aa20.5■□□□□ 0.87
USB1-214ENST00000568848 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
USB1-214ENST00000568848 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
USB1-214ENST00000568848 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
USB1-214ENST00000568848 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
USB1-214ENST00000568848 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
USB1-214ENST00000568848 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
USB1-214ENST00000568848 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
USB1-214ENST00000568848 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
USB1-214ENST00000568848 DCAF5Q96JK2 942 aa20.48■□□□□ 0.87
USB1-214ENST00000568848 PANK3Q9H999 370 aa20.48■□□□□ 0.87
USB1-214ENST00000568848 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
USB1-214ENST00000568848 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
USB1-214ENST00000568848 ADAMTS7Q9UKP4 1686 aa20.46■□□□□ 0.87
USB1-214ENST00000568848 TOMM70O94826 608 aa20.46■□□□□ 0.87
USB1-214ENST00000568848 MTHFSP49914 203 aa20.46■□□□□ 0.87
USB1-214ENST00000568848 WDR90Q96KV7 1748 aa20.46■□□□□ 0.87
USB1-214ENST00000568848 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
USB1-214ENST00000568848 APLP1P51693 650 aa20.45■□□□□ 0.86
USB1-214ENST00000568848 SULT6B1Q6IMI4 303 aa20.45■□□□□ 0.86
USB1-214ENST00000568848 ADRA2BP18089 450 aa20.44■□□□□ 0.86
USB1-214ENST00000568848 RASSF7Q02833 373 aa20.44■□□□□ 0.86
USB1-214ENST00000568848 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
USB1-214ENST00000568848 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
USB1-214ENST00000568848 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
USB1-214ENST00000568848 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
USB1-214ENST00000568848 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
USB1-214ENST00000568848 PCNTO95613 3336 aa20.42■□□□□ 0.86
USB1-214ENST00000568848 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
USB1-214ENST00000568848 SCN11AQ9UI33 1791 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
USB1-214ENST00000568848 PRELPP51888 382 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 USPL1Q5W0Q7 1092 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 LGR6Q9HBX8 967 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
USB1-214ENST00000568848 POLRMTO00411 1230 aaKnown RBP20.4■□□□□ 0.86
USB1-214ENST00000568848 SBF1O95248 1867 aa20.4■□□□□ 0.86
USB1-214ENST00000568848 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
USB1-214ENST00000568848 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
USB1-214ENST00000568848 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
USB1-214ENST00000568848 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
USB1-214ENST00000568848 IL13P35225 146 aa20.38■□□□□ 0.85
USB1-214ENST00000568848 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
USB1-214ENST00000568848 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
USB1-214ENST00000568848 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
USB1-214ENST00000568848 HMOX1P09601 288 aa20.37■□□□□ 0.85
USB1-214ENST00000568848 TM4SF1P30408 202 aa20.36■□□□□ 0.85
USB1-214ENST00000568848 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
USB1-214ENST00000568848 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
USB1-214ENST00000568848 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
USB1-214ENST00000568848 CAPN15O75808 1086 aa20.35■□□□□ 0.85
USB1-214ENST00000568848 NFIXQ14938 502 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms