RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 SYCE3A1L190 88 aa21■□□□□ 0.95
VAC14-210ENST00000568548 KIAA1211Q6ZU35 1233 aa21■□□□□ 0.95
VAC14-210ENST00000568548 IL1RAPL2Q9NP60 686 aa21■□□□□ 0.95
VAC14-210ENST00000568548 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
VAC14-210ENST00000568548 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
VAC14-210ENST00000568548 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
VAC14-210ENST00000568548 MSNP26038 577 aaKnown RBP20.99■□□□□ 0.95
VAC14-210ENST00000568548 ANO2Q9NQ90 1003 aa20.99■□□□□ 0.95
VAC14-210ENST00000568548 USP6P35125 1406 aa20.99■□□□□ 0.95
VAC14-210ENST00000568548 CHL1O00533 1208 aa20.99■□□□□ 0.95
VAC14-210ENST00000568548 ST18O60284 1047 aa20.98■□□□□ 0.95
VAC14-210ENST00000568548 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
VAC14-210ENST00000568548 CASC1Q6TDU7 716 aa20.98■□□□□ 0.95
VAC14-210ENST00000568548 PNMA6EA0A0J9YXQ4 647 aa20.98■□□□□ 0.95
VAC14-210ENST00000568548 PDE1AP54750 535 aa20.97■□□□□ 0.95
VAC14-210ENST00000568548 FKBP5Q13451 457 aaPredicted RBP20.97■□□□□ 0.95
VAC14-210ENST00000568548 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
VAC14-210ENST00000568548 RPAP2Q8IXW5 612 aaPredicted RBP20.97■□□□□ 0.95
VAC14-210ENST00000568548 NGDNQ8NEJ9 315 aaKnown RBP20.97■□□□□ 0.95
VAC14-210ENST00000568548 NRKQ7Z2Y5 1582 aa20.96■□□□□ 0.95
VAC14-210ENST00000568548 XPCQ01831 940 aaPredicted RBP20.96■□□□□ 0.95
VAC14-210ENST00000568548 ANKLE2Q86XL3 938 aa20.96■□□□□ 0.95
VAC14-210ENST00000568548 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
VAC14-210ENST00000568548 TMEM63CQ9P1W3 806 aa20.96■□□□□ 0.95
VAC14-210ENST00000568548 ATP10DQ9P241 1426 aa20.96■□□□□ 0.95
VAC14-210ENST00000568548 ERC2O15083 957 aa20.95■□□□□ 0.94
VAC14-210ENST00000568548 R3HCC1Q9Y3T6 440 aaKnown RBP20.95■□□□□ 0.94
VAC14-210ENST00000568548 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
VAC14-210ENST00000568548 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
VAC14-210ENST00000568548 NUCB2P80303 420 aa20.94■□□□□ 0.94
VAC14-210ENST00000568548 TMX3Q96JJ7 454 aa20.94■□□□□ 0.94
VAC14-210ENST00000568548 IL25Q9H293 177 aa20.94■□□□□ 0.94
VAC14-210ENST00000568548 NUTM1Q86Y26 1132 aa20.94■□□□□ 0.94
VAC14-210ENST00000568548 MAP3K19Q56UN5 1328 aa20.94■□□□□ 0.94
VAC14-210ENST00000568548 CCDC173Q0VFZ6 552 aa20.94■□□□□ 0.94
VAC14-210ENST00000568548 OVOS2A0A0J9YW53 1432 aa20.93■□□□□ 0.94
VAC14-210ENST00000568548 OVOS2Q6IE36 1432 aa20.93■□□□□ 0.94
VAC14-210ENST00000568548 REC8O95072 547 aa20.92■□□□□ 0.94
VAC14-210ENST00000568548 GLIPR1L2Q4G1C9 344 aa20.92■□□□□ 0.94
VAC14-210ENST00000568548 DDX54Q8TDD1 881 aaKnown RBP20.92■□□□□ 0.94
VAC14-210ENST00000568548 RGS12O14924 1447 aa20.92■□□□□ 0.94
VAC14-210ENST00000568548 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
VAC14-210ENST00000568548 SSH2Q76I76 1423 aa20.91■□□□□ 0.94
VAC14-210ENST00000568548 C14orf37Q86TY3 774 aa20.91■□□□□ 0.94
VAC14-210ENST00000568548 ZSCAN30Q86W11 494 aa20.91■□□□□ 0.94
VAC14-210ENST00000568548 FAM13BQ9NYF5 915 aa20.91■□□□□ 0.94
VAC14-210ENST00000568548 LRRFIP2Q9Y608 721 aaKnown RBP20.91■□□□□ 0.94
VAC14-210ENST00000568548 CYP2E1P05181 493 aaPredicted RBP20.9■□□□□ 0.94
VAC14-210ENST00000568548 RBM33Q96EV2 1170 aaKnown RBP20.9■□□□□ 0.94
VAC14-210ENST00000568548 ISY1Q9ULR0 285 aaKnown RBP20.9■□□□□ 0.94
VAC14-210ENST00000568548 ADAMTSL3P82987 1691 aa20.9■□□□□ 0.94
VAC14-210ENST00000568548 EIF2S2P20042 333 aaKnown RBP20.9■□□□□ 0.94
VAC14-210ENST00000568548 AMPHP49418 695 aa20.9■□□□□ 0.94
VAC14-210ENST00000568548 ANXA1P04083 346 aa20.89■□□□□ 0.94
VAC14-210ENST00000568548 TTC21AQ8NDW8 1320 aa20.89■□□□□ 0.93
VAC14-210ENST00000568548 HMMRO75330 724 aa20.88■□□□□ 0.93
VAC14-210ENST00000568548 GADD45BO75293 160 aaPredicted RBP20.88■□□□□ 0.93
VAC14-210ENST00000568548 GNAI2P04899 355 aa20.88■□□□□ 0.93
VAC14-210ENST00000568548 CPA1P15085 419 aa20.88■□□□□ 0.93
VAC14-210ENST00000568548 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
VAC14-210ENST00000568548 ZMYND15Q9H091 742 aa20.87■□□□□ 0.93
VAC14-210ENST00000568548 SETD1BQ9UPS6 1966 aaKnown RBP20.87■□□□□ 0.93
VAC14-210ENST00000568548 USP31Q70CQ4 1352 aa20.87■□□□□ 0.93
VAC14-210ENST00000568548 MX1P20591 662 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 PTMSP20962 102 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 FLIIQ13045 1269 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 EYA1Q99502 592 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 LRRCC1Q9C099 1032 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
VAC14-210ENST00000568548 PPP1R9BQ96SB3 815 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 ESYT1Q9BSJ8 1104 aa20.86■□□□□ 0.93
VAC14-210ENST00000568548 ZNF142P52746 1687 aaPredicted RBP20.86■□□□□ 0.93
VAC14-210ENST00000568548 ZNF830Q96NB3 372 aaPredicted RBP20.85■□□□□ 0.93
VAC14-210ENST00000568548 PTMAP06454 111 aaKnown RBP20.85■□□□□ 0.93
VAC14-210ENST00000568548 NALCNQ8IZF0 1738 aa20.85■□□□□ 0.93
VAC14-210ENST00000568548 DLG5Q8TDM6 1919 aa20.85■□□□□ 0.93
VAC14-210ENST00000568548 ANKARQ7Z5J8 1434 aa20.85■□□□□ 0.93
VAC14-210ENST00000568548 RRP9O43818 475 aaKnown RBP20.84■□□□□ 0.93
VAC14-210ENST00000568548 PLCB2Q00722 1185 aa20.84■□□□□ 0.93
VAC14-210ENST00000568548 CHD2O14647 1828 aaKnown RBP20.84■□□□□ 0.93
VAC14-210ENST00000568548 ZNF445P59923 1031 aa20.84■□□□□ 0.93
VAC14-210ENST00000568548 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
VAC14-210ENST00000568548 PEAK1Q9H792 1746 aa20.84■□□□□ 0.93
VAC14-210ENST00000568548 PTPRCP08575 1304 aa20.83■□□□□ 0.93
VAC14-210ENST00000568548 NLRP6P59044 892 aa20.83■□□□□ 0.93
VAC14-210ENST00000568548 CLEC17AQ6ZS10 378 aa20.83■□□□□ 0.93
VAC14-210ENST00000568548 CHMLP26374 656 aa20.83■□□□□ 0.92
VAC14-210ENST00000568548 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.92
VAC14-210ENST00000568548 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
VAC14-210ENST00000568548 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
VAC14-210ENST00000568548 FMN2Q9NZ56 1722 aa20.82■□□□□ 0.92
VAC14-210ENST00000568548 SURF6O75683 361 aaKnown RBP20.81■□□□□ 0.92
VAC14-210ENST00000568548 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
VAC14-210ENST00000568548 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
VAC14-210ENST00000568548 PIK3C2AO00443 1686 aa20.79■□□□□ 0.92
VAC14-210ENST00000568548 C17orf53Q8N3J3 647 aaPredicted RBP20.79■□□□□ 0.92
VAC14-210ENST00000568548 CHMP3Q9Y3E7 222 aa20.79■□□□□ 0.92
VAC14-210ENST00000568548 ABTB2Q8N961 1025 aa20.78■□□□□ 0.92
VAC14-210ENST00000568548 CWC27Q6UX04 472 aaKnown RBP20.78■□□□□ 0.92
VAC14-210ENST00000568548 PKNOX2Q96KN3 472 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms