RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 GAS2L1Q99501 681 aaPredicted RBP9.13□□□□□ -0.95
NAE1-216ENST00000566663 H7C1W4 665 aa9.12□□□□□ -0.95
NAE1-216ENST00000566663 F11P03951 625 aa9.12□□□□□ -0.95
NAE1-216ENST00000566663 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
NAE1-216ENST00000566663 DBN1Q16643 649 aa9.12□□□□□ -0.95
NAE1-216ENST00000566663 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
NAE1-216ENST00000566663 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
NAE1-216ENST00000566663 FNBP4Q8N3X1 1017 aaPredicted RBP9.12□□□□□ -0.95
NAE1-216ENST00000566663 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
NAE1-216ENST00000566663 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 PHKA2P46019 1235 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 NCOA4Q13772 614 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 GAS6Q14393 721 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 NOD1Q9Y239 953 aa9.11□□□□□ -0.95
NAE1-216ENST00000566663 A0A1B0GTH6 734 aa9.1□□□□□ -0.95
NAE1-216ENST00000566663 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
NAE1-216ENST00000566663 UCN2Q96RP3 112 aa9.1□□□□□ -0.95
NAE1-216ENST00000566663 TMEM229AB2RXF0 380 aa9.09□□□□□ -0.95
NAE1-216ENST00000566663 SLURP2P0DP57 97 aa9.09□□□□□ -0.95
NAE1-216ENST00000566663 GTF2IP78347 998 aa9.09□□□□□ -0.95
NAE1-216ENST00000566663 FOXR1Q6PIV2 292 aa9.09□□□□□ -0.95
NAE1-216ENST00000566663 DEPDC4Q8N2C3 294 aa9.09□□□□□ -0.95
NAE1-216ENST00000566663 GTPBP3Q969Y2 492 aaKnown RBP9.09□□□□□ -0.95
NAE1-216ENST00000566663 SMTNP53814 917 aa9.08□□□□□ -0.96
NAE1-216ENST00000566663 PLEKHM2Q8IWE5 1019 aa9.08□□□□□ -0.96
NAE1-216ENST00000566663 SLC4A9Q96Q91 983 aa9.08□□□□□ -0.96
NAE1-216ENST00000566663 NUCKS1Q9H1E3 243 aaKnown RBP9.08□□□□□ -0.96
NAE1-216ENST00000566663 A6NJR5 290 aa9.07□□□□□ -0.96
NAE1-216ENST00000566663 GPR25O00155 361 aa9.07□□□□□ -0.96
NAE1-216ENST00000566663 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
NAE1-216ENST00000566663 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
NAE1-216ENST00000566663 SERTAD1Q9UHV2 236 aa9.07□□□□□ -0.96
NAE1-216ENST00000566663 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 THBS1P07996 1170 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 MSX1P28360 303 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 MTFR1Q15390 333 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
NAE1-216ENST00000566663 A6NJY4 79 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 ATP9BO43861 1147 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 PLA2G4AP47712 749 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 SRSF11Q05519 484 aaKnown RBP9.05□□□□□ -0.96
NAE1-216ENST00000566663 PSME1Q06323 249 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 ZNF385CQ66K41 422 aaPredicted RBP9.05□□□□□ -0.96
NAE1-216ENST00000566663 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 ZNF295-AS1Q8N0V1 137 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 GLMNQ92990 594 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 TRERF1Q96PN7 1200 aa9.05□□□□□ -0.96
NAE1-216ENST00000566663 NIFKQ9BYG3 293 aaKnown RBP9.05□□□□□ -0.96
NAE1-216ENST00000566663 CDK2AP1O14519 115 aa9.04□□□□□ -0.96
NAE1-216ENST00000566663 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
NAE1-216ENST00000566663 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
NAE1-216ENST00000566663 BACH1O14867 736 aa9.03□□□□□ -0.96
NAE1-216ENST00000566663 LBRQ14739 615 aaKnown RBP9.03□□□□□ -0.96
NAE1-216ENST00000566663 SVOPQ8N4V2 548 aa9.03□□□□□ -0.96
NAE1-216ENST00000566663 WHAMMQ8TF30 809 aa9.03□□□□□ -0.96
NAE1-216ENST00000566663 RUBCNLQ9H714 662 aa9.03□□□□□ -0.96
NAE1-216ENST00000566663 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
NAE1-216ENST00000566663 CSB-PGBD3P0DP91 1061 aa9.02□□□□□ -0.97
NAE1-216ENST00000566663 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
NAE1-216ENST00000566663 PGBD3Q8N328 593 aa9.02□□□□□ -0.97
NAE1-216ENST00000566663 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
NAE1-216ENST00000566663 KIAA1024Q9UPX6 916 aa9.02□□□□□ -0.97
NAE1-216ENST00000566663 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
NAE1-216ENST00000566663 ATP4AP20648 1035 aa9.01□□□□□ -0.97
NAE1-216ENST00000566663 ATP1A2P50993 1020 aa9.01□□□□□ -0.97
NAE1-216ENST00000566663 CLDN10P78369 228 aa9.01□□□□□ -0.97
NAE1-216ENST00000566663 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
NAE1-216ENST00000566663 CFHR5Q9BXR6 569 aa9.01□□□□□ -0.97
NAE1-216ENST00000566663 CRISPLD1Q9H336 500 aa9.01□□□□□ -0.97
NAE1-216ENST00000566663 IGF1RP08069 1367 aa9□□□□□ -0.97
NAE1-216ENST00000566663 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
NAE1-216ENST00000566663 ARHGEF15O94989 841 aa9□□□□□ -0.97
NAE1-216ENST00000566663 EFHC2Q5JST6 749 aa9□□□□□ -0.97
NAE1-216ENST00000566663 SCHIP1Q9P0W5 487 aaPredicted RBP9□□□□□ -0.97
NAE1-216ENST00000566663 EPHA4P54764 986 aa8.99□□□□□ -0.97
NAE1-216ENST00000566663 LYPD4Q6UWN0 246 aa8.99□□□□□ -0.97
NAE1-216ENST00000566663 TPCN2Q8NHX9 752 aa8.99□□□□□ -0.97
NAE1-216ENST00000566663 DNAAF2Q9NVR5 837 aaKnown RBP8.99□□□□□ -0.97
NAE1-216ENST00000566663 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
NAE1-216ENST00000566663 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
NAE1-216ENST00000566663 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
NAE1-216ENST00000566663 MX2P20592 715 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 FOXK2Q01167 660 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 CALR3Q96L12 384 aaKnown RBP8.98□□□□□ -0.97
NAE1-216ENST00000566663 CABP1Q9NZU7 370 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 PHF24Q9UPV7 400 aa8.98□□□□□ -0.97
NAE1-216ENST00000566663 MAFBQ9Y5Q3 323 aaPredicted RBP8.98□□□□□ -0.97
NAE1-216ENST00000566663 CELA2BP08218 269 aaPredicted RBP8.97□□□□□ -0.97
NAE1-216ENST00000566663 NBPF1Q3BBV0 1214 aa8.97□□□□□ -0.97
NAE1-216ENST00000566663 LARGE2Q8N3Y3 721 aa8.97□□□□□ -0.97
NAE1-216ENST00000566663 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.98
NAE1-216ENST00000566663 TNS4Q8IZW8 715 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms