RNA–Protein interactions for RNA: ENST00000566587.5

UBE2I-213, Transcript of ubiquitin conjugating enzyme E2 I, human

APPRIS P1 TSL 2 BASIC

Gene UBE2I, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2I-213	ENST00000566587	LINC00116	Q8NCU8	138 aa		32.66	■■■□□ 2.82
UBE2I-213	ENST00000566587	AK7	Q96M32	723 aa		32.66	■■■□□ 2.82
UBE2I-213	ENST00000566587	PPP2R1A	P30153	589 aa		32.65	■■■□□ 2.82
UBE2I-213	ENST00000566587	ATP6V1A	P38606	617 aa		32.65	■■■□□ 2.82
UBE2I-213	ENST00000566587	ITPK1	Q13572	414 aa		32.65	■■■□□ 2.82
UBE2I-213	ENST00000566587	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.65	■■■□□ 2.82
UBE2I-213	ENST00000566587	U2SURP	O15042	1029 aa	Known RBP	32.64	■■■□□ 2.82
UBE2I-213	ENST00000566587	CFAP53	Q96M91	514 aa		32.64	■■■□□ 2.82
UBE2I-213	ENST00000566587	MSH5	O43196	834 aa		32.63	■■■□□ 2.81
UBE2I-213	ENST00000566587	POLD1	P28340	1107 aa		32.63	■■■□□ 2.81
UBE2I-213	ENST00000566587	MTHFSD	Q2M296	383 aa	Known RBP	32.63	■■■□□ 2.81
UBE2I-213	ENST00000566587	NFATC2IP	Q8NCF5	419 aa		32.63	■■■□□ 2.81
UBE2I-213	ENST00000566587	VIRMA	Q69YN4	1812 aa	Known RBP	32.63	■■■□□ 2.81
UBE2I-213	ENST00000566587	MAP3K5	Q99683	1374 aa		32.62	■■■□□ 2.81
UBE2I-213	ENST00000566587	SLC4A9	Q96Q91	983 aa		32.62	■■■□□ 2.81
UBE2I-213	ENST00000566587	SYT17	Q9BSW7	474 aa		32.62	■■■□□ 2.81
UBE2I-213	ENST00000566587	ADAMTS7	Q9UKP4	1686 aa		32.62	■■■□□ 2.81
UBE2I-213	ENST00000566587	AMIGO3	Q86WK7	504 aa		32.61	■■■□□ 2.81
UBE2I-213	ENST00000566587	MRC1	P22897	1456 aa		32.6	■■■□□ 2.81
UBE2I-213	ENST00000566587	RBM42	Q9BTD8	480 aa	Known RBP	32.59	■■■□□ 2.81
UBE2I-213	ENST00000566587	LGR6	Q9HBX8	967 aa		32.59	■■■□□ 2.81
UBE2I-213	ENST00000566587	COL5A3	P25940	1745 aa	Predicted RBP	32.58	■■■□□ 2.81
UBE2I-213	ENST00000566587	RNMT	O43148	476 aa	Known RBP	32.58	■■■□□ 2.81
UBE2I-213	ENST00000566587	SSFA2	P28290	1259 aa		32.58	■■■□□ 2.81
UBE2I-213	ENST00000566587	SLC52A2	Q9HAB3	445 aa		32.58	■■■□□ 2.81
UBE2I-213	ENST00000566587	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.56	■■■□□ 2.8
UBE2I-213	ENST00000566587	NUDC	Q9Y266	331 aa		32.55	■■■□□ 2.8
UBE2I-213	ENST00000566587	CIC	Q96RK0	1608 aa	Predicted RBP	32.54	■■■□□ 2.8
UBE2I-213	ENST00000566587	DCAF8L1	A6NGE4	600 aa		32.53	■■■□□ 2.8
UBE2I-213	ENST00000566587	GNPAT	O15228	680 aa		32.53	■■■□□ 2.8
UBE2I-213	ENST00000566587	PHF14	O94880	888 aa		32.53	■■■□□ 2.8
UBE2I-213	ENST00000566587	SMIM5	Q71RC9	77 aa		32.53	■■■□□ 2.8
UBE2I-213	ENST00000566587	RC3H1	Q5TC82	1133 aa	Known RBP	32.52	■■■□□ 2.8
UBE2I-213	ENST00000566587	MSL1	Q68DK7	614 aa		32.52	■■■□□ 2.8
UBE2I-213	ENST00000566587	GAS2L2	Q8NHY3	880 aa		32.52	■■■□□ 2.8
UBE2I-213	ENST00000566587	RSPH6A	Q9H0K4	717 aa		32.52	■■■□□ 2.8
UBE2I-213	ENST00000566587	PTCD1	O75127	700 aa	Known RBP	32.51	■■■□□ 2.79
UBE2I-213	ENST00000566587	CNTNAP4	Q9C0A0	1308 aa		32.51	■■■□□ 2.79
UBE2I-213	ENST00000566587	TJP1	Q07157	1748 aa		32.48	■■■□□ 2.79
UBE2I-213	ENST00000566587	PRKAR2B	P31323	418 aa		32.48	■■■□□ 2.79
UBE2I-213	ENST00000566587	MYH14	Q7Z406	1995 aa	Known RBP	32.48	■■■□□ 2.79
UBE2I-213	ENST00000566587	RTCB	Q9Y3I0	505 aa	Known RBP	32.47	■■■□□ 2.79
UBE2I-213	ENST00000566587	GNAT3	A8MTJ3	354 aa		32.46	■■■□□ 2.79
UBE2I-213	ENST00000566587	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.46	■■■□□ 2.79
UBE2I-213	ENST00000566587	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.46	■■■□□ 2.79
UBE2I-213	ENST00000566587	PHACTR3	Q96KR7	559 aa		32.46	■■■□□ 2.79
UBE2I-213	ENST00000566587	FCHSD2	O94868	740 aa		32.44	■■■□□ 2.78
UBE2I-213	ENST00000566587	KCP	Q6ZWJ8	1503 aa		32.43	■■■□□ 2.78
UBE2I-213	ENST00000566587	RPS6KA4	O75676	772 aa		32.43	■■■□□ 2.78
UBE2I-213	ENST00000566587	ADRA2B	P18089	450 aa		32.43	■■■□□ 2.78
UBE2I-213	ENST00000566587	KLHL34	Q8N239	644 aa		32.43	■■■□□ 2.78
UBE2I-213	ENST00000566587	IL17RE	Q8NFR9	667 aa		32.43	■■■□□ 2.78
UBE2I-213	ENST00000566587	SLC39A6	Q13433	755 aa		32.42	■■■□□ 2.78
UBE2I-213	ENST00000566587	TRAPPC3L	Q5T215	181 aa		32.42	■■■□□ 2.78
UBE2I-213	ENST00000566587	SIPA1L3	O60292	1781 aa	Predicted RBP	32.42	■■■□□ 2.78
UBE2I-213	ENST00000566587	UBR2	Q8IWV8	1755 aa		32.41	■■■□□ 2.78
UBE2I-213	ENST00000566587	CRKL	P46109	303 aa	Known RBP	32.4	■■■□□ 2.78
UBE2I-213	ENST00000566587	CEMIP	Q8WUJ3	1361 aa		32.4	■■■□□ 2.78
UBE2I-213	ENST00000566587	DDX10	Q13206	875 aa	Known RBP	32.39	■■■□□ 2.78
UBE2I-213	ENST00000566587	ARHGEF1	Q92888	912 aa	Known RBP	32.38	■■■□□ 2.77
UBE2I-213	ENST00000566587	TEF	Q10587	303 aa		32.37	■■■□□ 2.77
UBE2I-213	ENST00000566587	RALBP1	Q15311	655 aa		32.37	■■■□□ 2.77
UBE2I-213	ENST00000566587	NLGN2	Q8NFZ4	835 aa		32.37	■■■□□ 2.77
UBE2I-213	ENST00000566587	C4A	P0C0L4	1744 aa		32.37	■■■□□ 2.77
UBE2I-213	ENST00000566587	DNAJC10	Q8IXB1	793 aa		32.36	■■■□□ 2.77
UBE2I-213	ENST00000566587	VSIG10	Q8N0Z9	540 aa		32.36	■■■□□ 2.77
UBE2I-213	ENST00000566587	CD2AP	Q9Y5K6	639 aa		32.36	■■■□□ 2.77
UBE2I-213	ENST00000566587	UTRN	P46939	3433 aa		32.34	■■■□□ 2.77
UBE2I-213	ENST00000566587	INTS5	Q6P9B9	1019 aa	Known RBP	32.34	■■■□□ 2.77
UBE2I-213	ENST00000566587	RFC4	P35249	363 aa		32.33	■■■□□ 2.77
UBE2I-213	ENST00000566587	CYP19A1	P11511	503 aa	Predicted RBP	32.32	■■■□□ 2.76
UBE2I-213	ENST00000566587	TTC5	Q8N0Z6	440 aa		32.32	■■■□□ 2.76
UBE2I-213	ENST00000566587	NLGN1	Q8N2Q7	840 aa		32.31	■■■□□ 2.76
UBE2I-213	ENST00000566587	CCDC87	Q9NVE4	849 aa		32.31	■■■□□ 2.76
UBE2I-213	ENST00000566587	GYS1	P13807	737 aa		32.3	■■■□□ 2.76
UBE2I-213	ENST00000566587	YY1	P25490	414 aa		32.3	■■■□□ 2.76
UBE2I-213	ENST00000566587	ZNF790	Q6PG37	636 aa		32.3	■■■□□ 2.76
UBE2I-213	ENST00000566587	MMP10	P09238	476 aa		32.28	■■■□□ 2.76
UBE2I-213	ENST00000566587	GPR162	Q16538	588 aa		32.28	■■■□□ 2.76
UBE2I-213	ENST00000566587	HTATSF1	O43719	755 aa	Known RBP	32.27	■■■□□ 2.76
UBE2I-213	ENST00000566587	RTF1	Q92541	710 aa	Known RBP	32.27	■■■□□ 2.76
UBE2I-213	ENST00000566587	GOLGB1	Q14789	3259 aa	Known RBP	32.26	■■■□□ 2.76
UBE2I-213	ENST00000566587	ZNF496	Q96IT1	587 aa	Predicted RBP	32.26	■■■□□ 2.75
UBE2I-213	ENST00000566587	PLEKHF1	Q96S99	279 aa		32.26	■■■□□ 2.75
UBE2I-213	ENST00000566587	SOS1	Q07889	1333 aa	Predicted RBP	32.26	■■■□□ 2.75
UBE2I-213	ENST00000566587	USP42	Q9H9J4	1324 aa	Known RBP	32.26	■■■□□ 2.75
UBE2I-213	ENST00000566587	HEG1	Q9ULI3	1381 aa		32.25	■■■□□ 2.75
UBE2I-213	ENST00000566587	ZEB1	P37275	1124 aa	Predicted RBP	32.25	■■■□□ 2.75
UBE2I-213	ENST00000566587	CHD4	Q14839	1912 aa		32.25	■■■□□ 2.75
UBE2I-213	ENST00000566587	MCM10	Q7L590	875 aa		32.24	■■■□□ 2.75
UBE2I-213	ENST00000566587	BTBD11	A6QL63	1104 aa		32.23	■■■□□ 2.75
UBE2I-213	ENST00000566587	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.23	■■■□□ 2.75
UBE2I-213	ENST00000566587	DLG5	Q8TDM6	1919 aa		32.22	■■■□□ 2.75
UBE2I-213	ENST00000566587	KIF13B	Q9NQT8	1826 aa		32.22	■■■□□ 2.75
UBE2I-213	ENST00000566587	NEFM	P07197	916 aa		32.22	■■■□□ 2.75
UBE2I-213	ENST00000566587	SRP68	Q9UHB9	627 aa	Known RBP	32.22	■■■□□ 2.75
UBE2I-213	ENST00000566587	ZBTB1	Q9Y2K1	713 aa		32.22	■■■□□ 2.75
UBE2I-213	ENST00000566587	STARD3NL	O95772	234 aa		32.21	■■■□□ 2.75
UBE2I-213	ENST00000566587	PELP1	Q8IZL8	1130 aa	Known RBP	32.21	■■■□□ 2.75
UBE2I-213	ENST00000566587	FMNL2	Q96PY5	1086 aa		32.21	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms