RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
SMG1-212ENST00000566328 ITGB2P05107 769 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 CSB-PGBD3P0DP91 1061 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 CENPCQ03188 943 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 LBRQ14739 615 aaKnown RBP6.03□□□□□ -1.44
SMG1-212ENST00000566328 NEUROD2Q15784 382 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 GNASQ5JWF2 1037 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 ALYREFQ86V81 257 aaKnown RBP6.03□□□□□ -1.44
SMG1-212ENST00000566328 PGBD3Q8N328 593 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 GALNT6Q8NCL4 622 aa6.03□□□□□ -1.44
SMG1-212ENST00000566328 ZSCAN10Q96SZ4 725 aaPredicted RBP6.03□□□□□ -1.44
SMG1-212ENST00000566328 GDF2Q9UK05 429 aaPredicted RBP6.03□□□□□ -1.44
SMG1-212ENST00000566328 ESCO1Q5FWF5 840 aa6.02□□□□□ -1.45
SMG1-212ENST00000566328 TMEM214Q6NUQ4 689 aaKnown RBP6.02□□□□□ -1.45
SMG1-212ENST00000566328 GPAMQ9HCL2 828 aa6.02□□□□□ -1.45
SMG1-212ENST00000566328 RAB6BQ9NRW1 208 aa6.02□□□□□ -1.45
SMG1-212ENST00000566328 MKL2Q9ULH7 1088 aa6.02□□□□□ -1.45
SMG1-212ENST00000566328 PIK3R2O00459 728 aa6.01□□□□□ -1.45
SMG1-212ENST00000566328 PROCP04070 461 aa6.01□□□□□ -1.45
SMG1-212ENST00000566328 EFHC2Q5JST6 749 aa6.01□□□□□ -1.45
SMG1-212ENST00000566328 PRM3Q9NNZ6 103 aa6.01□□□□□ -1.45
SMG1-212ENST00000566328 CEP126Q9P2H0 1117 aa6.01□□□□□ -1.45
SMG1-212ENST00000566328 IL2RAP01589 272 aa6□□□□□ -1.45
SMG1-212ENST00000566328 PHKA2P46019 1235 aa6□□□□□ -1.45
SMG1-212ENST00000566328 USP4Q13107 963 aa6□□□□□ -1.45
SMG1-212ENST00000566328 GOLGA6L1Q8N7Z2 621 aa6□□□□□ -1.45
SMG1-212ENST00000566328 XAGE2Q96GT9 111 aa6□□□□□ -1.45
SMG1-212ENST00000566328 EIF4G2P78344 907 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMG1-212ENST00000566328 MTMR14Q8NCE2 650 aa5.99□□□□□ -1.45
SMG1-212ENST00000566328 KLRG1Q96E93 195 aa5.99□□□□□ -1.45
SMG1-212ENST00000566328 SIRT1Q96EB6 747 aa5.99□□□□□ -1.45
SMG1-212ENST00000566328 RRAGCQ9HB90 399 aa5.99□□□□□ -1.45
SMG1-212ENST00000566328 ATXN7L1Q9ULK2 861 aaPredicted RBP5.99□□□□□ -1.45
SMG1-212ENST00000566328 EDARADDQ8WWZ3 215 aa5.98□□□□□ -1.45
SMG1-212ENST00000566328 HRH3Q9Y5N1 445 aa5.98□□□□□ -1.45
SMG1-212ENST00000566328 BMP4P12644 408 aa5.97□□□□□ -1.45
SMG1-212ENST00000566328 AMPD1P23109 780 aa5.97□□□□□ -1.45
SMG1-212ENST00000566328 FIGNL1Q6PIW4 674 aa5.97□□□□□ -1.45
SMG1-212ENST00000566328 RHBDD1Q8TEB9 315 aa5.97□□□□□ -1.45
SMG1-212ENST00000566328 CCDC85AQ96PX6 553 aaPredicted RBP5.97□□□□□ -1.45
SMG1-212ENST00000566328 SHISA8B8ZZ34 492 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 GPR37L1O60883 481 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 MSX1P28360 303 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 SNRPNP63162 240 aaKnown RBP5.96□□□□□ -1.46
SMG1-212ENST00000566328 SLFNL1Q499Z3 407 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 C4orf17Q53FE4 359 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 PPARGC1BQ86YN6 1023 aaKnown RBP5.96□□□□□ -1.46
SMG1-212ENST00000566328 CDCA7Q9BWT1 371 aaPredicted RBP5.96□□□□□ -1.46
SMG1-212ENST00000566328 FHDC1Q9C0D6 1143 aaPredicted RBP5.96□□□□□ -1.46
SMG1-212ENST00000566328 RUBCNLQ9H714 662 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 DOLKQ9UPQ8 538 aa5.96□□□□□ -1.46
SMG1-212ENST00000566328 K7ELQ4 463 aaPredicted RBP5.95□□□□□ -1.46
SMG1-212ENST00000566328 THBS1P07996 1170 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 FGFR3P22607 806 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 SLCO4C1Q6ZQN7 724 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 TBC1D9Q6ZT07 1266 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 C1orf216Q8TAB5 229 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 CRISPLD1Q9H336 500 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 SNRKQ9NRH2 765 aa5.95□□□□□ -1.46
SMG1-212ENST00000566328 KRBA1A5PL33 1030 aa5.94□□□□□ -1.46
SMG1-212ENST00000566328 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
SMG1-212ENST00000566328 GNB5O14775 395 aa5.94□□□□□ -1.46
SMG1-212ENST00000566328 UBAP2LQ14157 1087 aaKnown RBP5.94□□□□□ -1.46
SMG1-212ENST00000566328 TLR1Q15399 786 aa5.94□□□□□ -1.46
SMG1-212ENST00000566328 C1orf229Q6ZS94 237 aaPredicted RBP5.94□□□□□ -1.46
SMG1-212ENST00000566328 Q8N3U1 123 aa5.94□□□□□ -1.46
SMG1-212ENST00000566328 ABHD17AQ96GS6 310 aa5.94□□□□□ -1.46
SMG1-212ENST00000566328 GGA1Q9UJY5 639 aa5.94□□□□□ -1.46
SMG1-212ENST00000566328 BNIP3LO60238 219 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 ARAFP10398 606 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 BAG6P46379 1132 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 NLRP8Q86W28 1048 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 RNF135Q8IUD6 432 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 PSMG3-AS1Q96PY0 264 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 ETNK1Q9HBU6 452 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 NOP53Q9NZM5 478 aaKnown RBP5.93□□□□□ -1.46
SMG1-212ENST00000566328 PCDHGC4Q9Y5F7 938 aa5.93□□□□□ -1.46
SMG1-212ENST00000566328 GRIN2CQ14957 1233 aa5.92□□□□□ -1.46
SMG1-212ENST00000566328 LINC00114Q6XXX2 140 aa5.92□□□□□ -1.46
SMG1-212ENST00000566328 PHTF2Q8N3S3 785 aa5.92□□□□□ -1.46
SMG1-212ENST00000566328 NIFKQ9BYG3 293 aaKnown RBP5.92□□□□□ -1.46
SMG1-212ENST00000566328 NDFIP2Q9NV92 336 aa5.92□□□□□ -1.46
SMG1-212ENST00000566328 EPXP11678 715 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 COL8A1P27658 744 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 PLA2G4AP47712 749 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 BRPF1P55201 1214 aaPredicted RBP5.91□□□□□ -1.46
SMG1-212ENST00000566328 CTBSQ01459 385 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 MAP7D1Q3KQU3 841 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 OXLD1Q5BKU9 147 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 AIDAQ96BJ3 306 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 BTBD6Q96KE9 485 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 TBC1D2BQ9UPU7 963 aa5.91□□□□□ -1.46
SMG1-212ENST00000566328 C2CD2LO14523 706 aa5.9□□□□□ -1.46
SMG1-212ENST00000566328 INHAP05111 366 aa5.9□□□□□ -1.46
SMG1-212ENST00000566328 NBPF1Q3BBV0 1214 aa5.9□□□□□ -1.46
SMG1-212ENST00000566328 ZCCHC2Q9C0B9 1178 aaKnown RBP5.9□□□□□ -1.46
SMG1-212ENST00000566328 AVENQ9NQS1 362 aaPredicted RBP5.9□□□□□ -1.46
SMG1-212ENST00000566328 CHIC2Q9UKJ5 165 aa5.9□□□□□ -1.46
SMG1-212ENST00000566328 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms