RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KDM6AO15550 1401 aaPredicted RBP25.85■■□□□ 1.73
ABCA3-204ENST00000566200 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
ABCA3-204ENST00000566200 COL5A3P25940 1745 aaPredicted RBP25.83■■□□□ 1.73
ABCA3-204ENST00000566200 SLC4A9Q96Q91 983 aa25.83■■□□□ 1.73
ABCA3-204ENST00000566200 GRIN3BO60391 1043 aa25.82■■□□□ 1.72
ABCA3-204ENST00000566200 AEBP1Q8IUX7 1158 aa25.82■■□□□ 1.72
ABCA3-204ENST00000566200 GNPATO15228 680 aa25.81■■□□□ 1.72
ABCA3-204ENST00000566200 MORC1Q86VD1 984 aa25.81■■□□□ 1.72
ABCA3-204ENST00000566200 ERVV-2B6SEH9 535 aa25.8■■□□□ 1.72
ABCA3-204ENST00000566200 PLEKHO1Q53GL0 409 aaPredicted RBP25.79■■□□□ 1.72
ABCA3-204ENST00000566200 DCAF5Q96JK2 942 aa25.79■■□□□ 1.72
ABCA3-204ENST00000566200 C1QTNF8P60827 252 aa25.78■■□□□ 1.72
ABCA3-204ENST00000566200 ZNF530Q6P9A1 599 aaPredicted RBP25.78■■□□□ 1.72
ABCA3-204ENST00000566200 HSP90AB1P08238 724 aaKnown RBP25.77■■□□□ 1.72
ABCA3-204ENST00000566200 AMOTQ4VCS5 1084 aa25.76■■□□□ 1.71
ABCA3-204ENST00000566200 KIAA1551Q9HCM1 1747 aa25.75■■□□□ 1.71
ABCA3-204ENST00000566200 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
ABCA3-204ENST00000566200 KNSTRNQ9Y448 316 aa25.75■■□□□ 1.71
ABCA3-204ENST00000566200 MYH14Q7Z406 1995 aaKnown RBP25.75■■□□□ 1.71
ABCA3-204ENST00000566200 KIF13BQ9NQT8 1826 aa25.74■■□□□ 1.71
ABCA3-204ENST00000566200 IL13P35225 146 aa25.74■■□□□ 1.71
ABCA3-204ENST00000566200 RBM42Q9BTD8 480 aaKnown RBP25.74■■□□□ 1.71
ABCA3-204ENST00000566200 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
ABCA3-204ENST00000566200 C4AP0C0L4 1744 aa25.74■■□□□ 1.71
ABCA3-204ENST00000566200 KIF7Q2M1P5 1343 aa25.73■■□□□ 1.71
ABCA3-204ENST00000566200 SULT6B1Q6IMI4 303 aa25.73■■□□□ 1.71
ABCA3-204ENST00000566200 CABP4P57796 275 aa25.72■■□□□ 1.71
ABCA3-204ENST00000566200 WWC3Q9ULE0 1092 aa25.72■■□□□ 1.71
ABCA3-204ENST00000566200 TJP1Q07157 1748 aa25.71■■□□□ 1.71
ABCA3-204ENST00000566200 CNTNAP4Q9C0A0 1308 aa25.71■■□□□ 1.71
ABCA3-204ENST00000566200 MMP10P09238 476 aa25.71■■□□□ 1.71
ABCA3-204ENST00000566200 MTHFSP49914 203 aa25.71■■□□□ 1.71
ABCA3-204ENST00000566200 RTCBQ9Y3I0 505 aaKnown RBP25.71■■□□□ 1.71
ABCA3-204ENST00000566200 CICQ96RK0 1608 aaPredicted RBP25.7■■□□□ 1.71
ABCA3-204ENST00000566200 GIGYF1O75420 1035 aaPredicted RBP25.7■■□□□ 1.7
ABCA3-204ENST00000566200 RC3H1Q5TC82 1133 aaKnown RBP25.7■■□□□ 1.7
ABCA3-204ENST00000566200 ATP10DQ9P241 1426 aa25.7■■□□□ 1.7
ABCA3-204ENST00000566200 ADCY9O60503 1353 aa25.69■■□□□ 1.7
ABCA3-204ENST00000566200 C1orf141Q5JVX7 400 aa25.69■■□□□ 1.7
ABCA3-204ENST00000566200 TRAPPC3LQ5T215 181 aa25.69■■□□□ 1.7
ABCA3-204ENST00000566200 ARHGEF1Q92888 912 aaKnown RBP25.69■■□□□ 1.7
ABCA3-204ENST00000566200 SENP3-EIF4A1A0A087X0R7 540 aa25.68■■□□□ 1.7
ABCA3-204ENST00000566200 NFATC2IPQ8NCF5 419 aa25.68■■□□□ 1.7
ABCA3-204ENST00000566200 N4BP2Q86UW6 1770 aaPredicted RBP25.68■■□□□ 1.7
ABCA3-204ENST00000566200 PXDNLA1KZ92 1463 aa25.67■■□□□ 1.7
ABCA3-204ENST00000566200 RPS6KA4O75676 772 aa25.67■■□□□ 1.7
ABCA3-204ENST00000566200 VIRMAQ69YN4 1812 aaKnown RBP25.67■■□□□ 1.7
ABCA3-204ENST00000566200 PTCD1O75127 700 aaKnown RBP25.66■■□□□ 1.7
ABCA3-204ENST00000566200 ADRA2BP18089 450 aa25.66■■□□□ 1.7
ABCA3-204ENST00000566200 PER1O15534 1290 aaPredicted RBP25.65■■□□□ 1.7
ABCA3-204ENST00000566200 GYS1P13807 737 aa25.65■■□□□ 1.7
ABCA3-204ENST00000566200 C10orf71Q711Q0 1435 aa25.64■■□□□ 1.7
ABCA3-204ENST00000566200 NLGN1Q8N2Q7 840 aa25.64■■□□□ 1.7
ABCA3-204ENST00000566200 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.69
ABCA3-204ENST00000566200 MRC1P22897 1456 aa25.62■■□□□ 1.69
ABCA3-204ENST00000566200 BRCA1P38398 1863 aaKnown RBP25.62■■□□□ 1.69
ABCA3-204ENST00000566200 RFC4P35249 363 aa25.61■■□□□ 1.69
ABCA3-204ENST00000566200 CRKLP46109 303 aaKnown RBP25.61■■□□□ 1.69
ABCA3-204ENST00000566200 AKAP4Q5JQC9 854 aa25.61■■□□□ 1.69
ABCA3-204ENST00000566200 LGR6Q9HBX8 967 aa25.6■■□□□ 1.69
ABCA3-204ENST00000566200 HMOX1P09601 288 aa25.59■■□□□ 1.69
ABCA3-204ENST00000566200 A0A0G2JLW4 131 aa25.58■■□□□ 1.69
ABCA3-204ENST00000566200 TGFB2P61812 414 aa25.58■■□□□ 1.69
ABCA3-204ENST00000566200 SLC52A2Q9HAB3 445 aa25.58■■□□□ 1.69
ABCA3-204ENST00000566200 CC2D1BQ5T0F9 858 aaKnown RBP25.57■■□□□ 1.68
ABCA3-204ENST00000566200 INTS5Q6P9B9 1019 aaKnown RBP25.57■■□□□ 1.68
ABCA3-204ENST00000566200 SRP68Q9UHB9 627 aaKnown RBP25.57■■□□□ 1.68
ABCA3-204ENST00000566200 COL3A1P02461 1466 aaPredicted RBP25.56■■□□□ 1.68
ABCA3-204ENST00000566200 KCPQ6ZWJ8 1503 aa25.56■■□□□ 1.68
ABCA3-204ENST00000566200 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
ABCA3-204ENST00000566200 MTHFSDQ2M296 383 aaKnown RBP25.55■■□□□ 1.68
ABCA3-204ENST00000566200 ZNF526Q8TF50 670 aaPredicted RBP25.55■■□□□ 1.68
ABCA3-204ENST00000566200 GPBP1L1Q9HC44 474 aaPredicted RBP25.55■■□□□ 1.68
ABCA3-204ENST00000566200 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
ABCA3-204ENST00000566200 USP42Q9H9J4 1324 aaKnown RBP25.55■■□□□ 1.68
ABCA3-204ENST00000566200 FKBP8Q14318 412 aa25.54■■□□□ 1.68
ABCA3-204ENST00000566200 DNAJC10Q8IXB1 793 aa25.54■■□□□ 1.68
ABCA3-204ENST00000566200 PARP3Q9Y6F1 533 aa25.54■■□□□ 1.68
ABCA3-204ENST00000566200 DIAPH1O60610 1272 aaKnown RBP25.53■■□□□ 1.68
ABCA3-204ENST00000566200 DPEP1P16444 411 aa25.53■■□□□ 1.68
ABCA3-204ENST00000566200 DDR1Q08345 913 aa25.53■■□□□ 1.68
ABCA3-204ENST00000566200 UBR2Q8IWV8 1755 aa25.53■■□□□ 1.68
ABCA3-204ENST00000566200 SLC39A6Q13433 755 aa25.52■■□□□ 1.68
ABCA3-204ENST00000566200 BCS1LQ9Y276 419 aa25.52■■□□□ 1.68
ABCA3-204ENST00000566200 KCNA3P22001 575 aa25.51■■□□□ 1.67
ABCA3-204ENST00000566200 NPC1L1Q9UHC9 1359 aa25.51■■□□□ 1.67
ABCA3-204ENST00000566200 ARFGEF1Q9Y6D6 1849 aa25.5■■□□□ 1.67
ABCA3-204ENST00000566200 SOS1Q07889 1333 aaPredicted RBP25.49■■□□□ 1.67
ABCA3-204ENST00000566200 CYP19A1P11511 503 aaPredicted RBP25.49■■□□□ 1.67
ABCA3-204ENST00000566200 TM4SF1P30408 202 aa25.46■■□□□ 1.67
ABCA3-204ENST00000566200 SIPA1L3O60292 1781 aaPredicted RBP25.46■■□□□ 1.67
ABCA3-204ENST00000566200 CEP350Q5VT06 3117 aa25.46■■□□□ 1.67
ABCA3-204ENST00000566200 AFDNP55196 1824 aaKnown RBP25.45■■□□□ 1.66
ABCA3-204ENST00000566200 POLRMTO00411 1230 aaKnown RBP25.45■■□□□ 1.66
ABCA3-204ENST00000566200 KIF3CO14782 793 aa25.45■■□□□ 1.66
ABCA3-204ENST00000566200 FCHSD2O94868 740 aa25.45■■□□□ 1.66
ABCA3-204ENST00000566200 CNGB1Q14028 1251 aaPredicted RBP25.45■■□□□ 1.66
ABCA3-204ENST00000566200 USPL1Q5W0Q7 1092 aa25.45■■□□□ 1.66
ABCA3-204ENST00000566200 ARHGAP27Q6ZUM4 889 aa25.44■■□□□ 1.66
ABCA3-204ENST00000566200 ZBTB1Q9Y2K1 713 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms