RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 IL16Q14005 1332 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 MYO1CO00159 1063 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 BICRAQ9NZM4 1560 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 CCDC112Q8NEF3 446 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 ST7Q9NRC1 585 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 ZNF75DP51815 510 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 PPP6R1Q9UPN7 881 aa3.46□□□□□ -1.86
CHD9-218ENST00000566029 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.46□□□□□ -1.86
CHD9-218ENST00000566029 PTGS1P23219 599 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 EXOSC9Q06265 439 aaKnown RBP3.45□□□□□ -1.86
CHD9-218ENST00000566029 MCTP2Q6DN12 878 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 MRVI1Q9Y6F6 885 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 CADPSQ9ULU8 1353 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 CCDC183Q5T5S1 534 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 SMC4Q9NTJ3 1288 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 PLXNC1O60486 1568 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 FAM170AA1A519 330 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 HSP90B2PQ58FF3 399 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 SUGP1Q8IWZ8 645 aaKnown RBP3.45□□□□□ -1.86
CHD9-218ENST00000566029 SSH1Q8WYL5 1049 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 UNC13AQ9UPW8 1703 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 A2MP01023 1474 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 TRIM66O15016 1216 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 CPP00450 1065 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 REXO1L1PQ8IX06 675 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 CCDC171Q6TFL3 1326 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 GORABQ5T7V8 394 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 SHANK2Q9UPX8 1470 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 PNMA6AP0CW24 399 aaPredicted RBP3.45□□□□□ -1.86
CHD9-218ENST00000566029 NEK11Q8NG66 645 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 ZCRB1Q8TBF4 217 aaKnown RBP3.45□□□□□ -1.86
CHD9-218ENST00000566029 RAD54L2Q9Y4B4 1467 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 SETSIPP0DME0 302 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 AATKQ6ZMQ8 1374 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 ABCC11Q96J66 1382 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 H3BQF6 201 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 NOL10Q9BSC4 688 aaKnown RBP3.45□□□□□ -1.86
CHD9-218ENST00000566029 DNMBPQ6XZF7 1577 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 MPHOSPH10O00566 681 aaKnown RBP3.45□□□□□ -1.86
CHD9-218ENST00000566029 KCND1Q9NSA2 647 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 PPIP5K1Q6PFW1 1433 aa3.45□□□□□ -1.86
CHD9-218ENST00000566029 TRIM29Q14134 588 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 ATF7IPQ6VMQ6 1270 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.44□□□□□ -1.861e-6■■■□□ 16.2
CHD9-218ENST00000566029 GCC1Q96CN9 775 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.44□□□□□ -1.866e-7■■■■■ 88.2
CHD9-218ENST00000566029 JRKLQ9Y4A0 524 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 DISP1Q96F81 1524 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 GTF2A1P52655 376 aaPredicted RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 LRRFIP1Q32MZ4 808 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 ZSCAN16Q9H4T2 348 aaPredicted RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 CDK13Q14004 1512 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 SYT10Q6XYQ8 523 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 TMX3Q96JJ7 454 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 ATP2B1P20020 1258 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 CCDC144BQ3MJ40 725 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 CCDC93Q567U6 631 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 CCDC144CPQ8IYA2 1237 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 FMNL2Q96PY5 1086 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 LRRFIP2Q9Y608 721 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 TMEM57Q8N5G2 664 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 ARHGAP45Q92619 1136 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 DONSONQ9NYP3 566 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 TROQ12816 1431 aaPredicted RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 NEMFO60524 1076 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 CCDC191Q8NCU4 936 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 FBXO18Q8NFZ0 1043 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 CARD14Q9BXL6 1004 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 PSD3Q9NYI0 1048 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 PAXBP1Q9Y5B6 917 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 SYNJ2O15056 1496 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 CEBPZQ03701 1054 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 SAFB2Q14151 953 aaKnown RBP eCLIP3.44□□□□□ -1.86
CHD9-218ENST00000566029 MMS22LQ6ZRQ5 1243 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 PLEKHG2Q9H7P9 1386 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 SYNMO15061 1565 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 TRIM27P14373 513 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 PUS7Q96PZ0 661 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 MAGEC2Q9UBF1 373 aaPredicted RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 SBNO1A3KN83 1393 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 REREQ9P2R6 1566 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 RPS6KA5O75582 802 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 RBM26Q5T8P6 1007 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 TICAM2Q86XR7 235 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 C11orf91Q3C1V1 193 aa3.44□□□□□ -1.86
CHD9-218ENST00000566029 TDRD9Q8NDG6 1382 aaKnown RBP3.44□□□□□ -1.86
CHD9-218ENST00000566029 KIF1CO43896 1103 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 CEP170Q5SW79 1584 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 USP48Q86UV5 1035 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 PACS2Q86VP3 889 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 CLSTN2Q9H4D0 955 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 CASC1Q6TDU7 716 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 FILIP1Q7Z7B0 1213 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 PLEKHM2Q8IWE5 1019 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 PRDM15P57071 1507 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 EIF4G3O43432 1585 aaKnown RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 USP27XA6NNY8 438 aa3.43□□□□□ -1.86
CHD9-218ENST00000566029 KIF2AO00139 706 aaPredicted RBP3.43□□□□□ -1.86
CHD9-218ENST00000566029 RGL3Q3MIN7 710 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms