RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
RNF40-208ENST00000565995 ITPK1Q13572 414 aa17.78■□□□□ 0.44
RNF40-208ENST00000565995 EYA1Q99502 592 aa17.78■□□□□ 0.44
RNF40-208ENST00000565995 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
RNF40-208ENST00000565995 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
RNF40-208ENST00000565995 PXDNLA1KZ92 1463 aa17.77■□□□□ 0.44
RNF40-208ENST00000565995 PHKG2P15735 406 aa17.77■□□□□ 0.44
RNF40-208ENST00000565995 TGFB2P61812 414 aa17.77■□□□□ 0.44
RNF40-208ENST00000565995 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
RNF40-208ENST00000565995 ATP6V1AP38606 617 aa17.76■□□□□ 0.43
RNF40-208ENST00000565995 ZNF526Q8TF50 670 aaPredicted RBP17.76■□□□□ 0.43
RNF40-208ENST00000565995 ATG3Q9NT62 314 aa17.76■□□□□ 0.43
RNF40-208ENST00000565995 KDRP35968 1356 aa17.76■□□□□ 0.43
RNF40-208ENST00000565995 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
RNF40-208ENST00000565995 GNPATO15228 680 aa17.75■□□□□ 0.43
RNF40-208ENST00000565995 RC3H1Q5TC82 1133 aaKnown RBP17.74■□□□□ 0.43
RNF40-208ENST00000565995 NLGN1Q8N2Q7 840 aa17.74■□□□□ 0.43
RNF40-208ENST00000565995 SCN11AQ9UI33 1791 aa17.74■□□□□ 0.43
RNF40-208ENST00000565995 C10orf71Q711Q0 1435 aa17.73■□□□□ 0.43
RNF40-208ENST00000565995 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
RNF40-208ENST00000565995 MMP10P09238 476 aa17.73■□□□□ 0.43
RNF40-208ENST00000565995 POLKQ9UBT6 870 aa17.73■□□□□ 0.43
RNF40-208ENST00000565995 CCDC88AQ3V6T2 1871 aa17.73■□□□□ 0.43
RNF40-208ENST00000565995 ADRA2BP18089 450 aa17.72■□□□□ 0.43
RNF40-208ENST00000565995 TRAPPC3LQ5T215 181 aa17.72■□□□□ 0.43
RNF40-208ENST00000565995 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
RNF40-208ENST00000565995 ADAMTS7Q9UKP4 1686 aa17.71■□□□□ 0.43
RNF40-208ENST00000565995 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
RNF40-208ENST00000565995 TOMM70O94826 608 aa17.71■□□□□ 0.43
RNF40-208ENST00000565995 APLP1P51693 650 aa17.71■□□□□ 0.43
RNF40-208ENST00000565995 DNAJC5GQ8N7S2 189 aa17.71■□□□□ 0.43
RNF40-208ENST00000565995 RTCBQ9Y3I0 505 aaKnown RBP17.71■□□□□ 0.43
RNF40-208ENST00000565995 TJP1Q07157 1748 aa17.7■□□□□ 0.42
RNF40-208ENST00000565995 WWC3Q9ULE0 1092 aa17.7■□□□□ 0.42
RNF40-208ENST00000565995 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
RNF40-208ENST00000565995 EIF4A2Q14240 407 aaKnown RBP17.69■□□□□ 0.42
RNF40-208ENST00000565995 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
RNF40-208ENST00000565995 CNTNAP4Q9C0A0 1308 aa17.69■□□□□ 0.42
RNF40-208ENST00000565995 TNRC6CQ9HCJ0 1690 aaKnown RBP17.68■□□□□ 0.42
RNF40-208ENST00000565995 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
RNF40-208ENST00000565995 RPS6KA4O75676 772 aa17.68■□□□□ 0.42
RNF40-208ENST00000565995 GYS1P13807 737 aa17.68■□□□□ 0.42
RNF40-208ENST00000565995 PCNTO95613 3336 aa17.67■□□□□ 0.42
RNF40-208ENST00000565995 DLEC1Q9Y238 1755 aa17.67■□□□□ 0.42
RNF40-208ENST00000565995 HSP90AB1P08238 724 aaKnown RBP17.67■□□□□ 0.42
RNF40-208ENST00000565995 KCNA3P22001 575 aa17.67■□□□□ 0.42
RNF40-208ENST00000565995 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
RNF40-208ENST00000565995 CCDC87Q9NVE4 849 aa17.67■□□□□ 0.42
RNF40-208ENST00000565995 BCS1LQ9Y276 419 aa17.66■□□□□ 0.42
RNF40-208ENST00000565995 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
RNF40-208ENST00000565995 DPEP1P16444 411 aa17.65■□□□□ 0.42
RNF40-208ENST00000565995 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
RNF40-208ENST00000565995 RFC4P35249 363 aa17.64■□□□□ 0.41
RNF40-208ENST00000565995 ARHGAP27Q6ZUM4 889 aa17.64■□□□□ 0.41
RNF40-208ENST00000565995 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
RNF40-208ENST00000565995 RBM46Q8TBY0 533 aaKnown RBP17.63■□□□□ 0.41
RNF40-208ENST00000565995 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
RNF40-208ENST00000565995 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
RNF40-208ENST00000565995 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
RNF40-208ENST00000565995 FCHSD2O94868 740 aa17.62■□□□□ 0.41
RNF40-208ENST00000565995 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
RNF40-208ENST00000565995 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
RNF40-208ENST00000565995 NMRK2Q9NPI5 230 aa17.62■□□□□ 0.41
RNF40-208ENST00000565995 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
RNF40-208ENST00000565995 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
RNF40-208ENST00000565995 CABP4P57796 275 aa17.59■□□□□ 0.41
RNF40-208ENST00000565995 FSTL1Q12841 308 aa17.59■□□□□ 0.41
RNF40-208ENST00000565995 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
RNF40-208ENST00000565995 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
RNF40-208ENST00000565995 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
RNF40-208ENST00000565995 TM4SF1P30408 202 aa17.57■□□□□ 0.4
RNF40-208ENST00000565995 CRKLP46109 303 aaKnown RBP17.57■□□□□ 0.4
RNF40-208ENST00000565995 DALRD3Q5D0E6 543 aaKnown RBP17.57■□□□□ 0.4
RNF40-208ENST00000565995 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
RNF40-208ENST00000565995 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
RNF40-208ENST00000565995 MTHFSP49914 203 aa17.56■□□□□ 0.4
RNF40-208ENST00000565995 DDR1Q08345 913 aa17.56■□□□□ 0.4
RNF40-208ENST00000565995 FKBP8Q14318 412 aa17.56■□□□□ 0.4
RNF40-208ENST00000565995 NFATC2IPQ8NCF5 419 aa17.56■□□□□ 0.4
RNF40-208ENST00000565995 KCPQ6ZWJ8 1503 aa17.56■□□□□ 0.4
RNF40-208ENST00000565995 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
RNF40-208ENST00000565995 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
RNF40-208ENST00000565995 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
RNF40-208ENST00000565995 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
RNF40-208ENST00000565995 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
RNF40-208ENST00000565995 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
RNF40-208ENST00000565995 SRP68Q9UHB9 627 aaKnown RBP17.54■□□□□ 0.4
RNF40-208ENST00000565995 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
RNF40-208ENST00000565995 ZC3H4Q9UPT8 1303 aaKnown RBP17.53■□□□□ 0.4
RNF40-208ENST00000565995 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
RNF40-208ENST00000565995 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
RNF40-208ENST00000565995 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
RNF40-208ENST00000565995 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
RNF40-208ENST00000565995 MRC1P22897 1456 aa17.52■□□□□ 0.4
RNF40-208ENST00000565995 AEBP1Q8IUX7 1158 aa17.51■□□□□ 0.39
RNF40-208ENST00000565995 PANK3Q9H999 370 aa17.51■□□□□ 0.39
RNF40-208ENST00000565995 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
RNF40-208ENST00000565995 CHRNA5P30532 468 aa17.5■□□□□ 0.39
RNF40-208ENST00000565995 RRAGCQ9HB90 399 aa17.5■□□□□ 0.39
RNF40-208ENST00000565995 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms