RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 PCDH11XQ9BZA7 1347 aa24.64■■□□□ 1.53
PKD1-230ENST00000565639 PCDH11YQ9BZA8 1340 aa24.64■■□□□ 1.53
PKD1-230ENST00000565639 BTBD11A6QL63 1104 aa24.63■■□□□ 1.53
PKD1-230ENST00000565639 MVPQ14764 893 aaKnown RBP24.63■■□□□ 1.53
PKD1-230ENST00000565639 PLCH1Q4KWH8 1693 aa24.62■■□□□ 1.53
PKD1-230ENST00000565639 EIF4A1P60842 406 aaKnown RBP24.62■■□□□ 1.53
PKD1-230ENST00000565639 JCADQ9P266 1359 aa24.62■■□□□ 1.53
PKD1-230ENST00000565639 MRC1P22897 1456 aa24.61■■□□□ 1.53
PKD1-230ENST00000565639 HOXB7P09629 217 aa24.61■■□□□ 1.53
PKD1-230ENST00000565639 SLC52A2Q9HAB3 445 aa24.61■■□□□ 1.53
PKD1-230ENST00000565639 TCERG1O14776 1098 aaKnown RBP24.6■■□□□ 1.53
PKD1-230ENST00000565639 ADAMTS2O95450 1211 aa24.6■■□□□ 1.53
PKD1-230ENST00000565639 CHMP4AQ9BY43 222 aa24.6■■□□□ 1.53
PKD1-230ENST00000565639 API5Q9BZZ5 524 aaKnown RBP24.6■■□□□ 1.53
PKD1-230ENST00000565639 CCDC30Q5VVM6 783 aa24.58■■□□□ 1.53
PKD1-230ENST00000565639 DDX19BQ9UMR2 479 aa24.58■■□□□ 1.53
PKD1-230ENST00000565639 NRAPQ86VF7 1730 aa24.57■■□□□ 1.52
PKD1-230ENST00000565639 DISP2A7MBM2 1401 aa24.57■■□□□ 1.52
PKD1-230ENST00000565639 NUTM2BA6NNL0 878 aaPredicted RBP24.57■■□□□ 1.52
PKD1-230ENST00000565639 NUTM2EB1AL46 878 aaPredicted RBP24.57■■□□□ 1.52
PKD1-230ENST00000565639 NKX1-1Q15270 411 aaPredicted RBP24.57■■□□□ 1.52
PKD1-230ENST00000565639 NUTM2AQ8IVF1 878 aaPredicted RBP24.57■■□□□ 1.52
PKD1-230ENST00000565639 PTPRCP08575 1304 aa24.57■■□□□ 1.52
PKD1-230ENST00000565639 SHANK3Q9BYB0 1731 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 NWD2Q9ULI1 1742 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 STK31Q9BXU1 1019 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 ABCC4O15439 1325 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 SLC4A2P04920 1241 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 TMEM57Q8N5G2 664 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 CACNA1FO60840 1977 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 HEG1Q9ULI3 1381 aa24.56■■□□□ 1.52
PKD1-230ENST00000565639 KCNQ3O43525 872 aa24.55■■□□□ 1.52
PKD1-230ENST00000565639 USP35Q9P2H5 1018 aa24.55■■□□□ 1.52
PKD1-230ENST00000565639 SLIT2O94813 1529 aa24.55■■□□□ 1.52
PKD1-230ENST00000565639 ITPRIPQ8IWB1 547 aa24.54■■□□□ 1.52
PKD1-230ENST00000565639 NFATC2IPQ8NCF5 419 aa24.53■■□□□ 1.52
PKD1-230ENST00000565639 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
PKD1-230ENST00000565639 ERVV-2B6SEH9 535 aa24.52■■□□□ 1.52
PKD1-230ENST00000565639 HDGFL1Q5TGJ6 251 aa24.52■■□□□ 1.52
PKD1-230ENST00000565639 ZNF790Q6PG37 636 aa24.52■■□□□ 1.52
PKD1-230ENST00000565639 SPATA31A6Q5VVP1 1343 aa24.51■■□□□ 1.51
PKD1-230ENST00000565639 CDCA7Q9BWT1 371 aaPredicted RBP24.51■■□□□ 1.51
PKD1-230ENST00000565639 CHMP4BQ9H444 224 aaKnown RBP24.51■■□□□ 1.51
PKD1-230ENST00000565639 THRAP3Q9Y2W1 955 aaKnown RBP24.51■■□□□ 1.51
PKD1-230ENST00000565639 RGS12O14924 1447 aa24.51■■□□□ 1.51
PKD1-230ENST00000565639 CABP4P57796 275 aa24.51■■□□□ 1.51
PKD1-230ENST00000565639 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
PKD1-230ENST00000565639 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
PKD1-230ENST00000565639 SPATA31A1Q5TZJ5 1347 aa24.49■■□□□ 1.51
PKD1-230ENST00000565639 GIGYF1O75420 1035 aaPredicted RBP24.49■■□□□ 1.51
PKD1-230ENST00000565639 DDX54Q8TDD1 881 aaKnown RBP24.49■■□□□ 1.51
PKD1-230ENST00000565639 INTS3Q68E01 1043 aaKnown RBP24.47■■□□□ 1.51
PKD1-230ENST00000565639 G2E3Q7L622 706 aa24.47■■□□□ 1.51
PKD1-230ENST00000565639 ZBTB40Q9NUA8 1239 aa24.47■■□□□ 1.51
PKD1-230ENST00000565639 SPATA31A5Q5VU36 1347 aa24.46■■□□□ 1.51
PKD1-230ENST00000565639 SPATA31A7Q8IWB4 1347 aa24.46■■□□□ 1.51
PKD1-230ENST00000565639 FLIIQ13045 1269 aa24.45■■□□□ 1.51
PKD1-230ENST00000565639 SLC39A6Q13433 755 aa24.45■■□□□ 1.51
PKD1-230ENST00000565639 NECTIN2Q92692 538 aa24.45■■□□□ 1.51
PKD1-230ENST00000565639 TTC5Q8N0Z6 440 aa24.45■■□□□ 1.5
PKD1-230ENST00000565639 PCDHB15Q9Y5E8 787 aa24.45■■□□□ 1.5
PKD1-230ENST00000565639 EXOC5O00471 708 aa24.44■■□□□ 1.5
PKD1-230ENST00000565639 ZBTB7BO15156 539 aaPredicted RBP24.44■■□□□ 1.5
PKD1-230ENST00000565639 EIF2S2P20042 333 aaKnown RBP24.44■■□□□ 1.5
PKD1-230ENST00000565639 UNC5CLQ8IV45 518 aa24.43■■□□□ 1.5
PKD1-230ENST00000565639 TNS2Q63HR2 1409 aa24.43■■□□□ 1.5
PKD1-230ENST00000565639 DBF4Q9UBU7 674 aaPredicted RBP24.42■■□□□ 1.5
PKD1-230ENST00000565639 BARGINQ6ZT62 677 aa24.42■■□□□ 1.5
PKD1-230ENST00000565639 ZNF496Q96IT1 587 aaPredicted RBP24.42■■□□□ 1.5
PKD1-230ENST00000565639 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
PKD1-230ENST00000565639 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
PKD1-230ENST00000565639 LRP6O75581 1613 aa24.41■■□□□ 1.5
PKD1-230ENST00000565639 HSPA1LP34931 641 aa24.41■■□□□ 1.5
PKD1-230ENST00000565639 FNBP4Q8N3X1 1017 aaPredicted RBP24.41■■□□□ 1.5
PKD1-230ENST00000565639 CHPF2Q9P2E5 772 aa24.41■■□□□ 1.5
PKD1-230ENST00000565639 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
PKD1-230ENST00000565639 IGHDP01880 384 aa24.4■■□□□ 1.5
PKD1-230ENST00000565639 FKBP5Q13451 457 aaPredicted RBP24.4■■□□□ 1.5
PKD1-230ENST00000565639 C8orf37Q96NL8 207 aa24.4■■□□□ 1.5
PKD1-230ENST00000565639 BCL9LQ86UU0 1499 aa24.4■■□□□ 1.5
PKD1-230ENST00000565639 RWDD1Q9H446 243 aaPredicted RBP24.4■■□□□ 1.5
PKD1-230ENST00000565639 PAPPAQ13219 1627 aa24.39■■□□□ 1.5
PKD1-230ENST00000565639 SNRPA1P09661 255 aaKnown RBP24.39■■□□□ 1.49
PKD1-230ENST00000565639 CCT4P50991 539 aaKnown RBP24.39■■□□□ 1.49
PKD1-230ENST00000565639 VPS72Q15906 364 aa24.38■■□□□ 1.49
PKD1-230ENST00000565639 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
PKD1-230ENST00000565639 C5P01031 1676 aa24.37■■□□□ 1.49
PKD1-230ENST00000565639 UBR2Q8IWV8 1755 aa24.37■■□□□ 1.49
PKD1-230ENST00000565639 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
PKD1-230ENST00000565639 HDAC1Q13547 482 aaPredicted RBP24.36■■□□□ 1.49
PKD1-230ENST00000565639 PHAXQ9H814 394 aaKnown RBP24.36■■□□□ 1.49
PKD1-230ENST00000565639 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
PKD1-230ENST00000565639 CCDC9Q9Y3X0 531 aaKnown RBP24.36■■□□□ 1.49
PKD1-230ENST00000565639 DDB1Q16531 1140 aa24.36■■□□□ 1.49
PKD1-230ENST00000565639 HYPKQ9NX55 129 aa24.36■■□□□ 1.49
PKD1-230ENST00000565639 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.35■■□□□ 1.49
PKD1-230ENST00000565639 GLI3P10071 1580 aa24.35■■□□□ 1.49
PKD1-230ENST00000565639 F6X3S4 739 aa24.35■■□□□ 1.49
PKD1-230ENST00000565639 DDX21Q9NR30 783 aaKnown RBP eCLIP24.35■■□□□ 1.49
PKD1-230ENST00000565639 N4BP2Q86UW6 1770 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms