RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 KNSTRNQ9Y448 316 aa25.82■■□□□ 1.72
NME3-207ENST00000564628 ASAP1Q9ULH1 1129 aa25.81■■□□□ 1.72
NME3-207ENST00000564628 ADCY9O60503 1353 aa25.81■■□□□ 1.72
NME3-207ENST00000564628 ATP6V1AP38606 617 aa25.79■■□□□ 1.72
NME3-207ENST00000564628 ITPK1Q13572 414 aa25.79■■□□□ 1.72
NME3-207ENST00000564628 SMIM5Q71RC9 77 aa25.79■■□□□ 1.72
NME3-207ENST00000564628 IGSF1Q8N6C5 1336 aa25.79■■□□□ 1.72
NME3-207ENST00000564628 GNPATO15228 680 aa25.78■■□□□ 1.72
NME3-207ENST00000564628 EIF4A2Q14240 407 aaKnown RBP25.78■■□□□ 1.72
NME3-207ENST00000564628 ATG3Q9NT62 314 aa25.77■■□□□ 1.72
NME3-207ENST00000564628 GPBP1L1Q9HC44 474 aaPredicted RBP25.76■■□□□ 1.71
NME3-207ENST00000564628 NPC1L1Q9UHC9 1359 aa25.76■■□□□ 1.71
NME3-207ENST00000564628 ZNF831Q5JPB2 1677 aa25.75■■□□□ 1.71
NME3-207ENST00000564628 KDRP35968 1356 aa25.75■■□□□ 1.71
NME3-207ENST00000564628 ERVV-2B6SEH9 535 aa25.73■■□□□ 1.71
NME3-207ENST00000564628 HSP90AB1P08238 724 aaKnown RBP25.72■■□□□ 1.71
NME3-207ENST00000564628 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
NME3-207ENST00000564628 MORC1Q86VD1 984 aa25.71■■□□□ 1.71
NME3-207ENST00000564628 DCAF5Q96JK2 942 aa25.71■■□□□ 1.71
NME3-207ENST00000564628 CICQ96RK0 1608 aaPredicted RBP25.7■■□□□ 1.71
NME3-207ENST00000564628 MMP10P09238 476 aa25.7■■□□□ 1.7
NME3-207ENST00000564628 RTCBQ9Y3I0 505 aaKnown RBP25.7■■□□□ 1.7
NME3-207ENST00000564628 ADRA2BP18089 450 aa25.69■■□□□ 1.7
NME3-207ENST00000564628 TRAPPC3LQ5T215 181 aa25.69■■□□□ 1.7
NME3-207ENST00000564628 KIF13BQ9NQT8 1826 aa25.69■■□□□ 1.7
NME3-207ENST00000564628 PLEKHO1Q53GL0 409 aaPredicted RBP25.68■■□□□ 1.7
NME3-207ENST00000564628 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
NME3-207ENST00000564628 NLGN1Q8N2Q7 840 aa25.68■■□□□ 1.7
NME3-207ENST00000564628 SLC4A9Q96Q91 983 aa25.68■■□□□ 1.7
NME3-207ENST00000564628 CEP350Q5VT06 3117 aa25.68■■□□□ 1.7
NME3-207ENST00000564628 COL5A3P25940 1745 aaPredicted RBP25.67■■□□□ 1.7
NME3-207ENST00000564628 AMOTQ4VCS5 1084 aa25.67■■□□□ 1.7
NME3-207ENST00000564628 WWC3Q9ULE0 1092 aa25.67■■□□□ 1.7
NME3-207ENST00000564628 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
NME3-207ENST00000564628 CNTNAP4Q9C0A0 1308 aa25.66■■□□□ 1.7
NME3-207ENST00000564628 TGFB2P61812 414 aa25.66■■□□□ 1.7
NME3-207ENST00000564628 ZNF526Q8TF50 670 aaPredicted RBP25.65■■□□□ 1.7
NME3-207ENST00000564628 RBM42Q9BTD8 480 aaKnown RBP25.65■■□□□ 1.7
NME3-207ENST00000564628 KIAA1551Q9HCM1 1747 aa25.65■■□□□ 1.7
NME3-207ENST00000564628 KDM6AO15550 1401 aaPredicted RBP25.64■■□□□ 1.7
NME3-207ENST00000564628 C10orf71Q711Q0 1435 aa25.63■■□□□ 1.69
NME3-207ENST00000564628 CC2D1BQ5T0F9 858 aaKnown RBP25.63■■□□□ 1.69
NME3-207ENST00000564628 ZNF530Q6P9A1 599 aaPredicted RBP25.63■■□□□ 1.69
NME3-207ENST00000564628 ARHGEF1Q92888 912 aaKnown RBP25.63■■□□□ 1.69
NME3-207ENST00000564628 RPS6KA4O75676 772 aa25.62■■□□□ 1.69
NME3-207ENST00000564628 HSPA6P17066 643 aa25.62■■□□□ 1.69
NME3-207ENST00000564628 CABP4P57796 275 aa25.62■■□□□ 1.69
NME3-207ENST00000564628 C4AP0C0L4 1744 aa25.6■■□□□ 1.69
NME3-207ENST00000564628 GYS1P13807 737 aa25.6■■□□□ 1.69
NME3-207ENST00000564628 RFC4P35249 363 aa25.6■■□□□ 1.69
NME3-207ENST00000564628 MTHFSP49914 203 aa25.59■■□□□ 1.69
NME3-207ENST00000564628 CCDC87Q9NVE4 849 aa25.59■■□□□ 1.69
NME3-207ENST00000564628 N4BP2Q86UW6 1770 aaPredicted RBP25.59■■□□□ 1.69
NME3-207ENST00000564628 A0A0G2JLW4 131 aa25.57■■□□□ 1.68
NME3-207ENST00000564628 KIF3CO14782 793 aa25.57■■□□□ 1.68
NME3-207ENST00000564628 C1orf141Q5JVX7 400 aa25.57■■□□□ 1.68
NME3-207ENST00000564628 AEBP1Q8IUX7 1158 aa25.57■■□□□ 1.68
NME3-207ENST00000564628 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
NME3-207ENST00000564628 PARP3Q9Y6F1 533 aa25.56■■□□□ 1.68
NME3-207ENST00000564628 MYH14Q7Z406 1995 aaKnown RBP25.56■■□□□ 1.68
NME3-207ENST00000564628 NFATC2IPQ8NCF5 419 aa25.54■■□□□ 1.68
NME3-207ENST00000564628 BRCA1P38398 1863 aaKnown RBP25.53■■□□□ 1.68
NME3-207ENST00000564628 PTCD1O75127 700 aaKnown RBP25.53■■□□□ 1.68
NME3-207ENST00000564628 DPEP1P16444 411 aa25.53■■□□□ 1.68
NME3-207ENST00000564628 IFFO2Q5TF58 517 aa25.53■■□□□ 1.68
NME3-207ENST00000564628 COL3A1P02461 1466 aaPredicted RBP25.53■■□□□ 1.68
NME3-207ENST00000564628 CRKLP46109 303 aaKnown RBP25.52■■□□□ 1.68
NME3-207ENST00000564628 SULT6B1Q6IMI4 303 aa25.52■■□□□ 1.68
NME3-207ENST00000564628 TJP1Q07157 1748 aa25.51■■□□□ 1.67
NME3-207ENST00000564628 FCHSD2O94868 740 aa25.5■■□□□ 1.67
NME3-207ENST00000564628 IL13P35225 146 aa25.5■■□□□ 1.67
NME3-207ENST00000564628 ARHGAP27Q6ZUM4 889 aa25.5■■□□□ 1.67
NME3-207ENST00000564628 USP42Q9H9J4 1324 aaKnown RBP25.5■■□□□ 1.67
NME3-207ENST00000564628 SCN11AQ9UI33 1791 aa25.5■■□□□ 1.67
NME3-207ENST00000564628 KCNA3P22001 575 aa25.49■■□□□ 1.67
NME3-207ENST00000564628 ARFGEF1Q9Y6D6 1849 aa25.47■■□□□ 1.67
NME3-207ENST00000564628 AKAP4Q5JQC9 854 aa25.47■■□□□ 1.67
NME3-207ENST00000564628 TOMM70O94826 608 aa25.46■■□□□ 1.67
NME3-207ENST00000564628 CNGB1Q14028 1251 aaPredicted RBP25.46■■□□□ 1.67
NME3-207ENST00000564628 FKBP8Q14318 412 aa25.46■■□□□ 1.67
NME3-207ENST00000564628 PIM2Q9P1W9 311 aa25.46■■□□□ 1.67
NME3-207ENST00000564628 SRP68Q9UHB9 627 aaKnown RBP25.46■■□□□ 1.67
NME3-207ENST00000564628 DDR1Q08345 913 aa25.45■■□□□ 1.66
NME3-207ENST00000564628 INTS5Q6P9B9 1019 aaKnown RBP25.45■■□□□ 1.66
NME3-207ENST00000564628 ADAMTS7Q9UKP4 1686 aa25.45■■□□□ 1.66
NME3-207ENST00000564628 SLC52A2Q9HAB3 445 aa25.44■■□□□ 1.66
NME3-207ENST00000564628 MRC1P22897 1456 aa25.43■■□□□ 1.66
NME3-207ENST00000564628 APLP1P51693 650 aa25.43■■□□□ 1.66
NME3-207ENST00000564628 DDX10Q13206 875 aaKnown RBP25.43■■□□□ 1.66
NME3-207ENST00000564628 PPP2R1AP30153 589 aa25.42■■□□□ 1.66
NME3-207ENST00000564628 DALRD3Q5D0E6 543 aaKnown RBP25.42■■□□□ 1.66
NME3-207ENST00000564628 TM4SF1P30408 202 aa25.41■■□□□ 1.66
NME3-207ENST00000564628 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
NME3-207ENST00000564628 POLRMTO00411 1230 aaKnown RBP25.4■■□□□ 1.66
NME3-207ENST00000564628 DNAJC10Q8IXB1 793 aa25.4■■□□□ 1.66
NME3-207ENST00000564628 NMRK2Q9NPI5 230 aa25.4■■□□□ 1.66
NME3-207ENST00000564628 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.66
NME3-207ENST00000564628 DIAPH1O60610 1272 aaKnown RBP25.39■■□□□ 1.66
NME3-207ENST00000564628 ZPR1O75312 459 aa25.39■■□□□ 1.66
NME3-207ENST00000564628 LGR6Q9HBX8 967 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms