RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SULT6B1Q6IMI4 303 aa20.37■□□□□ 0.85
SPG7-210ENST00000564409 KLHL34Q8N239 644 aa20.37■□□□□ 0.85
SPG7-210ENST00000564409 MTHFSP49914 203 aa20.36■□□□□ 0.85
SPG7-210ENST00000564409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
SPG7-210ENST00000564409 CABP4P57796 275 aa20.35■□□□□ 0.85
SPG7-210ENST00000564409 AEBP1Q8IUX7 1158 aa20.35■□□□□ 0.85
SPG7-210ENST00000564409 LINC00116Q8NCU8 138 aa20.35■□□□□ 0.85
SPG7-210ENST00000564409 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
SPG7-210ENST00000564409 ITPK1Q13572 414 aa20.34■□□□□ 0.85
SPG7-210ENST00000564409 KDM6AO15550 1401 aaPredicted RBP20.34■□□□□ 0.85
SPG7-210ENST00000564409 MSL1Q68DK7 614 aa20.33■□□□□ 0.85
SPG7-210ENST00000564409 SCN11AQ9UI33 1791 aa20.33■□□□□ 0.84
SPG7-210ENST00000564409 GNPATO15228 680 aa20.32■□□□□ 0.84
SPG7-210ENST00000564409 RC3H1Q5TC82 1133 aaKnown RBP20.32■□□□□ 0.84
SPG7-210ENST00000564409 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
SPG7-210ENST00000564409 PHF14O94880 888 aa20.31■□□□□ 0.84
SPG7-210ENST00000564409 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
SPG7-210ENST00000564409 NLGN2Q8NFZ4 835 aa20.31■□□□□ 0.84
SPG7-210ENST00000564409 COL5A3P25940 1745 aaPredicted RBP20.3■□□□□ 0.84
SPG7-210ENST00000564409 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
SPG7-210ENST00000564409 ADRA2BP18089 450 aa20.3■□□□□ 0.84
SPG7-210ENST00000564409 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
SPG7-210ENST00000564409 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
SPG7-210ENST00000564409 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
SPG7-210ENST00000564409 RTCBQ9Y3I0 505 aaKnown RBP20.29■□□□□ 0.84
SPG7-210ENST00000564409 UTRNP46939 3433 aa20.28■□□□□ 0.84
SPG7-210ENST00000564409 CNTNAP4Q9C0A0 1308 aa20.28■□□□□ 0.84
SPG7-210ENST00000564409 NFATC2IPQ8NCF5 419 aa20.28■□□□□ 0.84
SPG7-210ENST00000564409 TRAPPC3LQ5T215 181 aa20.27■□□□□ 0.84
SPG7-210ENST00000564409 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
SPG7-210ENST00000564409 ZNF784Q8NCA9 323 aaPredicted RBP20.27■□□□□ 0.84
SPG7-210ENST00000564409 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
SPG7-210ENST00000564409 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.83
SPG7-210ENST00000564409 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
SPG7-210ENST00000564409 MYH14Q7Z406 1995 aaKnown RBP20.25■□□□□ 0.83
SPG7-210ENST00000564409 RPS6KA4O75676 772 aa20.25■□□□□ 0.83
SPG7-210ENST00000564409 NLGN1Q8N2Q7 840 aa20.25■□□□□ 0.83
SPG7-210ENST00000564409 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
SPG7-210ENST00000564409 PTCD1O75127 700 aaKnown RBP20.23■□□□□ 0.83
SPG7-210ENST00000564409 HMOX1P09601 288 aa20.23■□□□□ 0.83
SPG7-210ENST00000564409 MRC1P22897 1456 aa20.23■□□□□ 0.83
SPG7-210ENST00000564409 SMIM5Q71RC9 77 aa20.22■□□□□ 0.83
SPG7-210ENST00000564409 ADAMTS7Q9UKP4 1686 aa20.22■□□□□ 0.83
SPG7-210ENST00000564409 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
SPG7-210ENST00000564409 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPG7-210ENST00000564409 RFC4P35249 363 aa20.21■□□□□ 0.83
SPG7-210ENST00000564409 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
SPG7-210ENST00000564409 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
SPG7-210ENST00000564409 MMP10P09238 476 aa20.2■□□□□ 0.82
SPG7-210ENST00000564409 KIF13BQ9NQT8 1826 aa20.2■□□□□ 0.82
SPG7-210ENST00000564409 TJP1Q07157 1748 aa20.19■□□□□ 0.82
SPG7-210ENST00000564409 CRKLP46109 303 aaKnown RBP20.19■□□□□ 0.82
SPG7-210ENST00000564409 MTHFSDQ2M296 383 aaKnown RBP20.19■□□□□ 0.82
SPG7-210ENST00000564409 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
SPG7-210ENST00000564409 LGR6Q9HBX8 967 aa20.19■□□□□ 0.82
SPG7-210ENST00000564409 C4AP0C0L4 1744 aa20.18■□□□□ 0.82
SPG7-210ENST00000564409 GYS1P13807 737 aa20.17■□□□□ 0.82
SPG7-210ENST00000564409 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
SPG7-210ENST00000564409 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
SPG7-210ENST00000564409 TGFB2P61812 414 aa20.16■□□□□ 0.82
SPG7-210ENST00000564409 VSIG10Q8N0Z9 540 aa20.16■□□□□ 0.82
SPG7-210ENST00000564409 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
SPG7-210ENST00000564409 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
SPG7-210ENST00000564409 PARP3Q9Y6F1 533 aa20.14■□□□□ 0.81
SPG7-210ENST00000564409 USP42Q9H9J4 1324 aaKnown RBP20.13■□□□□ 0.81
SPG7-210ENST00000564409 GNAT3A8MTJ3 354 aa20.13■□□□□ 0.81
SPG7-210ENST00000564409 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
SPG7-210ENST00000564409 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
SPG7-210ENST00000564409 DNAJC10Q8IXB1 793 aa20.12■□□□□ 0.81
SPG7-210ENST00000564409 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
SPG7-210ENST00000564409 C10orf71Q711Q0 1435 aa20.11■□□□□ 0.81
SPG7-210ENST00000564409 GOLGB1Q14789 3259 aaKnown RBP20.11■□□□□ 0.81
SPG7-210ENST00000564409 CYP19A1P11511 503 aaPredicted RBP20.11■□□□□ 0.81
SPG7-210ENST00000564409 TEFQ10587 303 aa20.11■□□□□ 0.81
SPG7-210ENST00000564409 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
SPG7-210ENST00000564409 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
SPG7-210ENST00000564409 ZPR1O75312 459 aa20.1■□□□□ 0.81
SPG7-210ENST00000564409 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
SPG7-210ENST00000564409 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
SPG7-210ENST00000564409 SOS1Q07889 1333 aaPredicted RBP20.09■□□□□ 0.81
SPG7-210ENST00000564409 SIPA1L3O60292 1781 aaPredicted RBP20.09■□□□□ 0.81
SPG7-210ENST00000564409 TEX13AQ9BXU3 409 aaPredicted RBP20.09■□□□□ 0.81
SPG7-210ENST00000564409 KIAA1551Q9HCM1 1747 aa20.09■□□□□ 0.81
SPG7-210ENST00000564409 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.81
SPG7-210ENST00000564409 STARD3NLO95772 234 aa20.08■□□□□ 0.81
SPG7-210ENST00000564409 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
SPG7-210ENST00000564409 FCHSD2O94868 740 aa20.07■□□□□ 0.8
SPG7-210ENST00000564409 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
SPG7-210ENST00000564409 RSPH6AQ9H0K4 717 aa20.07■□□□□ 0.8
SPG7-210ENST00000564409 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
SPG7-210ENST00000564409 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
SPG7-210ENST00000564409 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
SPG7-210ENST00000564409 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
SPG7-210ENST00000564409 C1QTNF8P60827 252 aa20.06■□□□□ 0.8
SPG7-210ENST00000564409 FKBP8Q14318 412 aa20.06■□□□□ 0.8
SPG7-210ENST00000564409 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
SPG7-210ENST00000564409 SRP68Q9UHB9 627 aaKnown RBP20.06■□□□□ 0.8
SPG7-210ENST00000564409 NARFQ9UHQ1 456 aa20.06■□□□□ 0.8
SPG7-210ENST00000564409 TM4SF1P30408 202 aa20.05■□□□□ 0.8
SPG7-210ENST00000564409 COL15A1P39059 1388 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms