RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	FBXO18	Q8NFZ0	1043 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	GUCY2C	P25092	1073 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	USP48	Q86UV5	1035 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	HSPA4	P34932	840 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	CHMP7	Q8WUX9	453 aa	Predicted RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	GBP6	Q6ZN66	633 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	LOC102724159	A0A0B4J2E5	919 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	PWP2	Q15269	919 aa	Known RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	NKTR	P30414	1462 aa	Known RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	KIAA0586	Q9BVV6	1533 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	ATF7IP	Q6VMQ6	1270 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	KIF5B	P33176	963 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	C10orf67	Q8IYJ2	551 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	SLMAP	Q14BN4	828 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	LNPK	Q9C0E8	428 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	LUC7L	Q9NQ29	371 aa	Known RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	CHMP3	Q9Y3E7	222 aa		4.96	□□□□□ -1.61
MACF1-231	ENST00000564288	CCDC38	Q502W7	563 aa		4.96	□□□□□ -1.61
MACF1-231	ENST00000564288	RLBP1	P12271	317 aa		4.96	□□□□□ -1.61
MACF1-231	ENST00000564288	CCDC186	Q7Z3E2	898 aa		4.96	□□□□□ -1.61
MACF1-231	ENST00000564288	PIK3C2G	O75747	1445 aa		4.96	□□□□□ -1.61
MACF1-231	ENST00000564288	CCDC30	Q5VVM6	783 aa		4.96	□□□□□ -1.61
MACF1-231	ENST00000564288	SYNJ2	O15056	1496 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	RSRC1	Q96IZ7	334 aa	Known RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	ELP1	O95163	1332 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	SLFNL1	Q499Z3	407 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	ODF2	Q5BJF6	829 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	IMMT	Q16891	758 aa	Known RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	4.96	□□□□□ -1.62	9e-7	■■□□□ 13.3
MACF1-231	ENST00000564288	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	CYP46A1	Q9Y6A2	500 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	INPP5B	P32019	993 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	TXLNA	P40222	546 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	KIF4B	Q2VIQ3	1234 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	SEPT14	Q6ZU15	432 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	NUP62CL	Q9H1M0	184 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	FAM135A	Q9P2D6	1515 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	NT5C2	P49902	561 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	CLIP2	Q9UDT6	1046 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	SECISBP2L	Q93073	1101 aa	Known RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	BICD2	Q8TD16	824 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	SERPINC1	P01008	464 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	CEP57L1	Q8IYX8	460 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	SWAP70	Q9UH65	585 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	NPM1	P06748	294 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	TTC12	Q9H892	705 aa	Predicted RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	ACTN2	P35609	894 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	DRC1	Q96MC2	740 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	RIOK3	O14730	519 aa	Known RBP	4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	PDILT	Q8N807	584 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	CCDC102A	Q96A19	550 aa		4.96	□□□□□ -1.62
MACF1-231	ENST00000564288	ADGRL1	O94910	1474 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	NAIP	Q13075	1403 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	TAX1BP1	Q86VP1	789 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	DUSP27	Q5VZP5	1158 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	FAM210A	Q96ND0	272 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	PSMD1	Q99460	953 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	UPF3B	Q9BZI7	483 aa	Known RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	BCAR3	O75815	825 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	ARHGAP29	Q52LW3	1261 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	FAM200A	Q8TCP9	573 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	TRERF1	Q96PN7	1200 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	NUP155	O75694	1391 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	PPP1R12A	O14974	1030 aa	Predicted RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	GTF2E1	P29083	439 aa	Predicted RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	NES	P48681	1621 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	SKIDA1	Q1XH10	827 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	CCDC150	Q8NCX0	1101 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	FMNL2	Q96PY5	1086 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	IGSF3	O75054	1194 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	ANKRD36B	Q8N2N9	1353 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	KIAA1524	Q8TCG1	905 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	LRPPRC	P42704	1394 aa	Known RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	SNW1	Q13573	536 aa	Known RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	GAS2L3	Q86XJ1	694 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.95	□□□□□ -1.62	2e-6	■■■□□ 17.9
MACF1-231	ENST00000564288	ERBIN	Q96RT1	1412 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	CLSTN1	O94985	981 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	EFCAB13	Q8IY85	973 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	SPATA32	Q96LK8	384 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	LMBRD1	Q9NUN5	540 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	MCM6	Q14566	821 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	CCDC114	Q96M63	670 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	GNG11	P61952	73 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	ALDH1L2	Q3SY69	923 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	ARFGAP2	Q8N6H7	521 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	PPP2R1A	P30153	589 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	TCP11L2	Q8N4U5	519 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	SMARCC1	Q92922	1105 aa	Predicted RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	NOB1	Q9ULX3	412 aa	Known RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	VGLL3	A8MV65	326 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	ADGRL2	O95490	1459 aa		4.95	□□□□□ -1.62
MACF1-231	ENST00000564288	RGS22	Q8NE09	1264 aa		4.94	□□□□□ -1.62
MACF1-231	ENST00000564288	CCDC47	Q96A33	483 aa	Known RBP	4.94	□□□□□ -1.62
MACF1-231	ENST00000564288	DONSON	Q9NYP3	566 aa		4.94	□□□□□ -1.62
MACF1-231	ENST00000564288	IQGAP2	Q13576	1575 aa		4.94	□□□□□ -1.62
MACF1-231	ENST00000564288	NBPF11	Q86T75	865 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms