RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 COL13A1Q5TAT6 717 aaPredicted RBP24.81■■□□□ 1.56
TRAF7-202ENST00000564067 CCDC87Q9NVE4 849 aa24.81■■□□□ 1.56
TRAF7-202ENST00000564067 KIF13BQ9NQT8 1826 aa24.81■■□□□ 1.56
TRAF7-202ENST00000564067 WDR90Q96KV7 1748 aa24.81■■□□□ 1.56
TRAF7-202ENST00000564067 MAP2P11137 1827 aaKnown RBP24.8■■□□□ 1.56
TRAF7-202ENST00000564067 TRAPPC3LQ5T215 181 aa24.8■■□□□ 1.56
TRAF7-202ENST00000564067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.8■■□□□ 1.56
TRAF7-202ENST00000564067 RTCBQ9Y3I0 505 aaKnown RBP24.8■■□□□ 1.56
TRAF7-202ENST00000564067 ITPK1Q13572 414 aa24.79■■□□□ 1.56
TRAF7-202ENST00000564067 KDM2BQ8NHM5 1336 aa24.79■■□□□ 1.56
TRAF7-202ENST00000564067 C10orf71Q711Q0 1435 aa24.78■■□□□ 1.56
TRAF7-202ENST00000564067 PKD1L3Q7Z443 1732 aa24.78■■□□□ 1.56
TRAF7-202ENST00000564067 ST20-MTHFSA0A0A6YYL1 179 aa24.78■■□□□ 1.56
TRAF7-202ENST00000564067 ADRA2BP18089 450 aa24.77■■□□□ 1.56
TRAF7-202ENST00000564067 C9orf131Q5VYM1 1079 aa24.77■■□□□ 1.56
TRAF7-202ENST00000564067 TNS4Q8IZW8 715 aa24.77■■□□□ 1.56
TRAF7-202ENST00000564067 ASAP1Q9ULH1 1129 aa24.77■■□□□ 1.56
TRAF7-202ENST00000564067 DPEP1P16444 411 aa24.75■■□□□ 1.55
TRAF7-202ENST00000564067 KIAA1551Q9HCM1 1747 aa24.75■■□□□ 1.55
TRAF7-202ENST00000564067 PRELPP51888 382 aa24.74■■□□□ 1.55
TRAF7-202ENST00000564067 IFNL2Q8IZJ0 200 aa24.74■■□□□ 1.55
TRAF7-202ENST00000564067 PARP3Q9Y6F1 533 aa24.74■■□□□ 1.55
TRAF7-202ENST00000564067 NCAPD2Q15021 1401 aa24.74■■□□□ 1.55
TRAF7-202ENST00000564067 N4BP2Q86UW6 1770 aaPredicted RBP24.74■■□□□ 1.55
TRAF7-202ENST00000564067 RC3H1Q5TC82 1133 aaKnown RBP24.73■■□□□ 1.55
TRAF7-202ENST00000564067 CAPN15O75808 1086 aa24.72■■□□□ 1.55
TRAF7-202ENST00000564067 HTRA3P83110 453 aa24.72■■□□□ 1.55
TRAF7-202ENST00000564067 ATG3Q9NT62 314 aa24.72■■□□□ 1.55
TRAF7-202ENST00000564067 PIM2Q9P1W9 311 aa24.72■■□□□ 1.55
TRAF7-202ENST00000564067 RFC4P35249 363 aa24.71■■□□□ 1.55
TRAF7-202ENST00000564067 ARHGEF1Q92888 912 aaKnown RBP24.71■■□□□ 1.55
TRAF7-202ENST00000564067 TONSLQ96HA7 1378 aa24.7■■□□□ 1.55
TRAF7-202ENST00000564067 GYS1P13807 737 aa24.7■■□□□ 1.54
TRAF7-202ENST00000564067 PHKG2P15735 406 aa24.7■■□□□ 1.54
TRAF7-202ENST00000564067 DALRD3Q5D0E6 543 aaKnown RBP24.69■■□□□ 1.54
TRAF7-202ENST00000564067 SMC1BQ8NDV3 1235 aa24.69■■□□□ 1.54
TRAF7-202ENST00000564067 KCNA3P22001 575 aa24.68■■□□□ 1.54
TRAF7-202ENST00000564067 EMILIN1Q9Y6C2 1016 aa24.68■■□□□ 1.54
TRAF7-202ENST00000564067 PCNTO95613 3336 aa24.68■■□□□ 1.54
TRAF7-202ENST00000564067 CNTNAP4Q9C0A0 1308 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 C4AP0C0L4 1744 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 RPS6KA4O75676 772 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 RRAGCQ9HB90 399 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 RNF181Q9P0P0 153 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 KDRP35968 1356 aa24.67■■□□□ 1.54
TRAF7-202ENST00000564067 KCPQ6ZWJ8 1503 aa24.66■■□□□ 1.54
TRAF7-202ENST00000564067 ARFGEF1Q9Y6D6 1849 aa24.66■■□□□ 1.54
TRAF7-202ENST00000564067 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
TRAF7-202ENST00000564067 CDCA8Q53HL2 280 aa24.66■■□□□ 1.54
TRAF7-202ENST00000564067 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
TRAF7-202ENST00000564067 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
TRAF7-202ENST00000564067 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
TRAF7-202ENST00000564067 KIF20BQ96Q89 1820 aa24.64■■□□□ 1.54
TRAF7-202ENST00000564067 ERVV-2B6SEH9 535 aa24.64■■□□□ 1.54
TRAF7-202ENST00000564067 EYA1Q99502 592 aa24.64■■□□□ 1.54
TRAF7-202ENST00000564067 ZNF831Q5JPB2 1677 aa24.64■■□□□ 1.53
TRAF7-202ENST00000564067 ZC3H4Q9UPT8 1303 aaKnown RBP24.63■■□□□ 1.53
TRAF7-202ENST00000564067 HSP90AB1P08238 724 aaKnown RBP24.62■■□□□ 1.53
TRAF7-202ENST00000564067 TNRC6CQ9HCJ0 1690 aaKnown RBP24.62■■□□□ 1.53
TRAF7-202ENST00000564067 SLC4A9Q96Q91 983 aa24.61■■□□□ 1.53
TRAF7-202ENST00000564067 HSPA1AP0DMV8 641 aaKnown RBP24.57■■□□□ 1.52
TRAF7-202ENST00000564067 HSPA1BP0DMV9 641 aaKnown RBP24.57■■□□□ 1.52
TRAF7-202ENST00000564067 VEGFAP15692 232 aaPredicted RBP24.56■■□□□ 1.52
TRAF7-202ENST00000564067 COL5A3P25940 1745 aaPredicted RBP24.55■■□□□ 1.52
TRAF7-202ENST00000564067 CARD14Q9BXL6 1004 aa24.54■■□□□ 1.52
TRAF7-202ENST00000564067 ANKRD26Q9UPS8 1709 aa24.54■■□□□ 1.52
TRAF7-202ENST00000564067 USP42Q9H9J4 1324 aaKnown RBP24.54■■□□□ 1.52
TRAF7-202ENST00000564067 GLTPD2A6NH11 291 aa24.53■■□□□ 1.52
TRAF7-202ENST00000564067 CABP4P57796 275 aa24.53■■□□□ 1.52
TRAF7-202ENST00000564067 LMNB1P20700 586 aa24.52■■□□□ 1.52
TRAF7-202ENST00000564067 CHRNA5P30532 468 aa24.52■■□□□ 1.52
TRAF7-202ENST00000564067 DDR1Q08345 913 aa24.52■■□□□ 1.52
TRAF7-202ENST00000564067 FKBP8Q14318 412 aa24.52■■□□□ 1.52
TRAF7-202ENST00000564067 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
TRAF7-202ENST00000564067 CRKLP46109 303 aaKnown RBP24.51■■□□□ 1.51
TRAF7-202ENST00000564067 POLKQ9UBT6 870 aa24.51■■□□□ 1.51
TRAF7-202ENST00000564067 SBF1O95248 1867 aa24.51■■□□□ 1.51
TRAF7-202ENST00000564067 SRP68Q9UHB9 627 aaKnown RBP24.5■■□□□ 1.51
TRAF7-202ENST00000564067 KDM6AO15550 1401 aaPredicted RBP24.5■■□□□ 1.51
TRAF7-202ENST00000564067 EIF4A2Q14240 407 aaKnown RBP24.49■■□□□ 1.51
TRAF7-202ENST00000564067 AMOTQ4VCS5 1084 aa24.49■■□□□ 1.51
TRAF7-202ENST00000564067 MYH14Q7Z406 1995 aaKnown RBP24.49■■□□□ 1.51
TRAF7-202ENST00000564067 POLRMTO00411 1230 aaKnown RBP24.48■■□□□ 1.51
TRAF7-202ENST00000564067 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
TRAF7-202ENST00000564067 TM4SF1P30408 202 aa24.48■■□□□ 1.51
TRAF7-202ENST00000564067 ZPR1O75312 459 aa24.47■■□□□ 1.51
TRAF7-202ENST00000564067 RASSF7Q02833 373 aa24.46■■□□□ 1.51
TRAF7-202ENST00000564067 MTHFSP49914 203 aa24.45■■□□□ 1.5
TRAF7-202ENST00000564067 ZNF530Q6P9A1 599 aaPredicted RBP24.45■■□□□ 1.5
TRAF7-202ENST00000564067 DPY19L2Q6NUT2 758 aa24.44■■□□□ 1.5
TRAF7-202ENST00000564067 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
TRAF7-202ENST00000564067 TTLL6Q8N841 843 aa24.43■■□□□ 1.5
TRAF7-202ENST00000564067 NFATC2IPQ8NCF5 419 aa24.41■■□□□ 1.5
TRAF7-202ENST00000564067 USPL1Q5W0Q7 1092 aa24.4■■□□□ 1.5
TRAF7-202ENST00000564067 INTS5Q6P9B9 1019 aaKnown RBP24.4■■□□□ 1.5
TRAF7-202ENST00000564067 CREBZFQ9NS37 354 aa24.39■■□□□ 1.49
TRAF7-202ENST00000564067 H0YIN7 160 aa24.36■■□□□ 1.49
TRAF7-202ENST00000564067 NFIXQ14938 502 aa24.36■■□□□ 1.49
TRAF7-202ENST00000564067 NARFQ9UHQ1 456 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms