RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
HDGFL3-203ENST00000563404 KDRP35968 1356 aa23.11■■□□□ 1.29
HDGFL3-203ENST00000563404 GNPATO15228 680 aa23.1■■□□□ 1.29
HDGFL3-203ENST00000563404 SENP3-EIF4A1A0A087X0R7 540 aa23.09■■□□□ 1.29
HDGFL3-203ENST00000563404 GIGYF1O75420 1035 aaPredicted RBP23.08■■□□□ 1.29
HDGFL3-203ENST00000563404 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
HDGFL3-203ENST00000563404 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
HDGFL3-203ENST00000563404 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
HDGFL3-203ENST00000563404 PLEKHO1Q53GL0 409 aaPredicted RBP23.06■■□□□ 1.28
HDGFL3-203ENST00000563404 DCAF5Q96JK2 942 aa23.06■■□□□ 1.28
HDGFL3-203ENST00000563404 WWC3Q9ULE0 1092 aa23.06■■□□□ 1.28
HDGFL3-203ENST00000563404 ZNF530Q6P9A1 599 aaPredicted RBP23.05■■□□□ 1.28
HDGFL3-203ENST00000563404 MORC1Q86VD1 984 aa23.05■■□□□ 1.28
HDGFL3-203ENST00000563404 RBM42Q9BTD8 480 aaKnown RBP23.04■■□□□ 1.28
HDGFL3-203ENST00000563404 ATP10DQ9P241 1426 aa23.04■■□□□ 1.28
HDGFL3-203ENST00000563404 HSP90AB1P08238 724 aaKnown RBP23.03■■□□□ 1.28
HDGFL3-203ENST00000563404 ZNF831Q5JPB2 1677 aa23.03■■□□□ 1.28
HDGFL3-203ENST00000563404 MMP10P09238 476 aa23.02■■□□□ 1.28
HDGFL3-203ENST00000563404 AMOTQ4VCS5 1084 aa23.02■■□□□ 1.28
HDGFL3-203ENST00000563404 ADCY9O60503 1353 aa23.01■■□□□ 1.27
HDGFL3-203ENST00000563404 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
HDGFL3-203ENST00000563404 COL5A3P25940 1745 aaPredicted RBP23.01■■□□□ 1.27
HDGFL3-203ENST00000563404 IL13P35225 146 aa23■■□□□ 1.27
HDGFL3-203ENST00000563404 CABP4P57796 275 aa23■■□□□ 1.27
HDGFL3-203ENST00000563404 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
HDGFL3-203ENST00000563404 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
HDGFL3-203ENST00000563404 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
HDGFL3-203ENST00000563404 RC3H1Q5TC82 1133 aaKnown RBP22.99■■□□□ 1.27
HDGFL3-203ENST00000563404 ARHGEF1Q92888 912 aaKnown RBP22.99■■□□□ 1.27
HDGFL3-203ENST00000563404 CNTNAP4Q9C0A0 1308 aa22.99■■□□□ 1.27
HDGFL3-203ENST00000563404 MTHFSP49914 203 aa22.98■■□□□ 1.27
HDGFL3-203ENST00000563404 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
HDGFL3-203ENST00000563404 KNSTRNQ9Y448 316 aa22.98■■□□□ 1.27
HDGFL3-203ENST00000563404 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
HDGFL3-203ENST00000563404 KIAA1551Q9HCM1 1747 aa22.97■■□□□ 1.27
HDGFL3-203ENST00000563404 PXDNLA1KZ92 1463 aa22.97■■□□□ 1.27
HDGFL3-203ENST00000563404 MYH14Q7Z406 1995 aaKnown RBP22.96■■□□□ 1.27
HDGFL3-203ENST00000563404 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
HDGFL3-203ENST00000563404 GYS1P13807 737 aa22.96■■□□□ 1.27
HDGFL3-203ENST00000563404 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
HDGFL3-203ENST00000563404 NFATC2IPQ8NCF5 419 aa22.96■■□□□ 1.27
HDGFL3-203ENST00000563404 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
HDGFL3-203ENST00000563404 PTCD1O75127 700 aaKnown RBP22.95■■□□□ 1.26
HDGFL3-203ENST00000563404 ADRA2BP18089 450 aa22.95■■□□□ 1.26
HDGFL3-203ENST00000563404 NLGN1Q8N2Q7 840 aa22.95■■□□□ 1.26
HDGFL3-203ENST00000563404 CEP350Q5VT06 3117 aa22.94■■□□□ 1.26
HDGFL3-203ENST00000563404 C10orf71Q711Q0 1435 aa22.94■■□□□ 1.26
HDGFL3-203ENST00000563404 KIF7Q2M1P5 1343 aa22.93■■□□□ 1.26
HDGFL3-203ENST00000563404 ZNF526Q8TF50 670 aaPredicted RBP22.93■■□□□ 1.26
HDGFL3-203ENST00000563404 GPBP1L1Q9HC44 474 aaPredicted RBP22.93■■□□□ 1.26
HDGFL3-203ENST00000563404 C4AP0C0L4 1744 aa22.93■■□□□ 1.26
HDGFL3-203ENST00000563404 N4BP2Q86UW6 1770 aaPredicted RBP22.92■■□□□ 1.26
HDGFL3-203ENST00000563404 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
HDGFL3-203ENST00000563404 RFC4P35249 363 aa22.92■■□□□ 1.26
HDGFL3-203ENST00000563404 TJP1Q07157 1748 aa22.91■■□□□ 1.26
HDGFL3-203ENST00000563404 CRKLP46109 303 aaKnown RBP22.91■■□□□ 1.26
HDGFL3-203ENST00000563404 TGFB2P61812 414 aa22.91■■□□□ 1.26
HDGFL3-203ENST00000563404 SCN11AQ9UI33 1791 aa22.9■■□□□ 1.26
HDGFL3-203ENST00000563404 LGR6Q9HBX8 967 aa22.89■■□□□ 1.25
HDGFL3-203ENST00000563404 SRP68Q9UHB9 627 aaKnown RBP22.89■■□□□ 1.25
HDGFL3-203ENST00000563404 PER1O15534 1290 aaPredicted RBP22.88■■□□□ 1.25
HDGFL3-203ENST00000563404 DPEP1P16444 411 aa22.88■■□□□ 1.25
HDGFL3-203ENST00000563404 AKAP4Q5JQC9 854 aa22.88■■□□□ 1.25
HDGFL3-203ENST00000563404 CCDC87Q9NVE4 849 aa22.88■■□□□ 1.25
HDGFL3-203ENST00000563404 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
HDGFL3-203ENST00000563404 BCS1LQ9Y276 419 aa22.87■■□□□ 1.25
HDGFL3-203ENST00000563404 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
HDGFL3-203ENST00000563404 HMOX1P09601 288 aa22.86■■□□□ 1.25
HDGFL3-203ENST00000563404 FKBP8Q14318 412 aa22.86■■□□□ 1.25
HDGFL3-203ENST00000563404 SLC52A2Q9HAB3 445 aa22.86■■□□□ 1.25
HDGFL3-203ENST00000563404 USP42Q9H9J4 1324 aaKnown RBP22.85■■□□□ 1.25
HDGFL3-203ENST00000563404 ADAMTS7Q9UKP4 1686 aa22.85■■□□□ 1.25
HDGFL3-203ENST00000563404 KCNA3P22001 575 aa22.85■■□□□ 1.25
HDGFL3-203ENST00000563404 DNAJC10Q8IXB1 793 aa22.85■■□□□ 1.25
HDGFL3-203ENST00000563404 DDR1Q08345 913 aa22.84■■□□□ 1.25
HDGFL3-203ENST00000563404 MRC1P22897 1456 aa22.84■■□□□ 1.25
HDGFL3-203ENST00000563404 KIF3CO14782 793 aa22.83■■□□□ 1.25
HDGFL3-203ENST00000563404 RNMTO43148 476 aaKnown RBP22.83■■□□□ 1.25
HDGFL3-203ENST00000563404 SLC39A6Q13433 755 aa22.83■■□□□ 1.25
HDGFL3-203ENST00000563404 BRCA1P38398 1863 aaKnown RBP22.83■■□□□ 1.24
HDGFL3-203ENST00000563404 MTHFSDQ2M296 383 aaKnown RBP22.82■■□□□ 1.24
HDGFL3-203ENST00000563404 CC2D1BQ5T0F9 858 aaKnown RBP22.82■■□□□ 1.24
HDGFL3-203ENST00000563404 KCPQ6ZWJ8 1503 aa22.81■■□□□ 1.24
HDGFL3-203ENST00000563404 FCHSD2O94868 740 aa22.8■■□□□ 1.24
HDGFL3-203ENST00000563404 ARHGAP27Q6ZUM4 889 aa22.8■■□□□ 1.24
HDGFL3-203ENST00000563404 SOS1Q07889 1333 aaPredicted RBP22.8■■□□□ 1.24
HDGFL3-203ENST00000563404 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
HDGFL3-203ENST00000563404 CYP19A1P11511 503 aaPredicted RBP22.79■■□□□ 1.24
HDGFL3-203ENST00000563404 TM4SF1P30408 202 aa22.79■■□□□ 1.24
HDGFL3-203ENST00000563404 VIRMAQ69YN4 1812 aaKnown RBP22.78■■□□□ 1.24
HDGFL3-203ENST00000563404 POLRMTO00411 1230 aaKnown RBP22.78■■□□□ 1.24
HDGFL3-203ENST00000563404 HSPA6P17066 643 aa22.78■■□□□ 1.24
HDGFL3-203ENST00000563404 USPL1Q5W0Q7 1092 aa22.78■■□□□ 1.24
HDGFL3-203ENST00000563404 COL3A1P02461 1466 aaPredicted RBP22.77■■□□□ 1.24
HDGFL3-203ENST00000563404 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
HDGFL3-203ENST00000563404 CHRNA5P30532 468 aa22.75■■□□□ 1.23
HDGFL3-203ENST00000563404 PIM2Q9P1W9 311 aa22.75■■□□□ 1.23
HDGFL3-203ENST00000563404 ARFGEF1Q9Y6D6 1849 aa22.75■■□□□ 1.23
HDGFL3-203ENST00000563404 ZPR1O75312 459 aa22.74■■□□□ 1.23
HDGFL3-203ENST00000563404 CNGB1Q14028 1251 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms