RNA–Protein interactions for RNA: ENST00000560553.1

MFGE8-213, Transcript of milk fat globule-EGF factor 8 protein, humanhuman

TSL 4

Gene MFGE8, Length 500 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFGE8-213ENST00000560553 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
MFGE8-213ENST00000560553 ITPK1Q13572 414 aa12.33□□□□□ -0.44
MFGE8-213ENST00000560553 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
MFGE8-213ENST00000560553 DCAF5Q96JK2 942 aa12.33□□□□□ -0.44
MFGE8-213ENST00000560553 ATG3Q9NT62 314 aa12.33□□□□□ -0.44
MFGE8-213ENST00000560553 KDRP35968 1356 aa12.32□□□□□ -0.44
MFGE8-213ENST00000560553 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
MFGE8-213ENST00000560553 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
MFGE8-213ENST00000560553 HMOX1P09601 288 aa12.32□□□□□ -0.44
MFGE8-213ENST00000560553 HMGB2P26583 209 aaKnown RBP12.32□□□□□ -0.44
MFGE8-213ENST00000560553 CABP4P57796 275 aa12.32□□□□□ -0.44
MFGE8-213ENST00000560553 SCN11AQ9UI33 1791 aa12.31□□□□□ -0.44
MFGE8-213ENST00000560553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
MFGE8-213ENST00000560553 GNPATO15228 680 aa12.31□□□□□ -0.44
MFGE8-213ENST00000560553 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
MFGE8-213ENST00000560553 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
MFGE8-213ENST00000560553 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
MFGE8-213ENST00000560553 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
MFGE8-213ENST00000560553 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
MFGE8-213ENST00000560553 NLGN2Q8NFZ4 835 aa12.3□□□□□ -0.44
MFGE8-213ENST00000560553 CHD4Q14839 1912 aa12.29□□□□□ -0.44
MFGE8-213ENST00000560553 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
MFGE8-213ENST00000560553 NPC1L1Q9UHC9 1359 aa12.29□□□□□ -0.44
MFGE8-213ENST00000560553 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
MFGE8-213ENST00000560553 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
MFGE8-213ENST00000560553 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
MFGE8-213ENST00000560553 SSFA2P28290 1259 aa12.28□□□□□ -0.44
MFGE8-213ENST00000560553 GPR162Q16538 588 aa12.28□□□□□ -0.44
MFGE8-213ENST00000560553 NFATC2IPQ8NCF5 419 aa12.28□□□□□ -0.44
MFGE8-213ENST00000560553 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.44
MFGE8-213ENST00000560553 ZNF831Q5JPB2 1677 aa12.27□□□□□ -0.45
MFGE8-213ENST00000560553 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.45
MFGE8-213ENST00000560553 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.45
MFGE8-213ENST00000560553 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
MFGE8-213ENST00000560553 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
MFGE8-213ENST00000560553 TJP1Q07157 1748 aa12.25□□□□□ -0.45
MFGE8-213ENST00000560553 RTCBQ9Y3I0 505 aaKnown RBP12.25□□□□□ -0.45
MFGE8-213ENST00000560553 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
MFGE8-213ENST00000560553 CNTNAP4Q9C0A0 1308 aa12.24□□□□□ -0.45
MFGE8-213ENST00000560553 SLC52A2Q9HAB3 445 aa12.24□□□□□ -0.45
MFGE8-213ENST00000560553 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
MFGE8-213ENST00000560553 MRC1P22897 1456 aa12.23□□□□□ -0.45
MFGE8-213ENST00000560553 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
MFGE8-213ENST00000560553 TRAPPC3LQ5T215 181 aa12.23□□□□□ -0.45
MFGE8-213ENST00000560553 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
MFGE8-213ENST00000560553 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
MFGE8-213ENST00000560553 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
MFGE8-213ENST00000560553 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
MFGE8-213ENST00000560553 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
MFGE8-213ENST00000560553 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
MFGE8-213ENST00000560553 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
MFGE8-213ENST00000560553 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
MFGE8-213ENST00000560553 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
MFGE8-213ENST00000560553 MMP10P09238 476 aa12.21□□□□□ -0.45
MFGE8-213ENST00000560553 PPP2R1AP30153 589 aa12.21□□□□□ -0.45
MFGE8-213ENST00000560553 RFC4P35249 363 aa12.21□□□□□ -0.45
MFGE8-213ENST00000560553 CICQ96RK0 1608 aaPredicted RBP12.21□□□□□ -0.46
MFGE8-213ENST00000560553 ADRA2BP18089 450 aa12.2□□□□□ -0.46
MFGE8-213ENST00000560553 PRKAR2BP31323 418 aa12.2□□□□□ -0.46
MFGE8-213ENST00000560553 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
MFGE8-213ENST00000560553 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
MFGE8-213ENST00000560553 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
MFGE8-213ENST00000560553 KCPQ6ZWJ8 1503 aa12.2□□□□□ -0.46
MFGE8-213ENST00000560553 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
MFGE8-213ENST00000560553 GYS1P13807 737 aa12.19□□□□□ -0.46
MFGE8-213ENST00000560553 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
MFGE8-213ENST00000560553 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
MFGE8-213ENST00000560553 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
MFGE8-213ENST00000560553 SIPA1L3O60292 1781 aaPredicted RBP12.18□□□□□ -0.46
MFGE8-213ENST00000560553 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
MFGE8-213ENST00000560553 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
MFGE8-213ENST00000560553 TEFQ10587 303 aa12.18□□□□□ -0.46
MFGE8-213ENST00000560553 INTS5Q6P9B9 1019 aaKnown RBP12.18□□□□□ -0.46
MFGE8-213ENST00000560553 PHACTR3Q96KR7 559 aa12.18□□□□□ -0.46
MFGE8-213ENST00000560553 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
MFGE8-213ENST00000560553 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
MFGE8-213ENST00000560553 KIF13BQ9NQT8 1826 aa12.17□□□□□ -0.46
MFGE8-213ENST00000560553 GRIN3BO60391 1043 aa12.17□□□□□ -0.46
MFGE8-213ENST00000560553 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
MFGE8-213ENST00000560553 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
MFGE8-213ENST00000560553 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
MFGE8-213ENST00000560553 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
MFGE8-213ENST00000560553 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
MFGE8-213ENST00000560553 FKBP8Q14318 412 aa12.16□□□□□ -0.46
MFGE8-213ENST00000560553 KIAA1551Q9HCM1 1747 aa12.16□□□□□ -0.46
MFGE8-213ENST00000560553 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.46
MFGE8-213ENST00000560553 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
MFGE8-213ENST00000560553 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
MFGE8-213ENST00000560553 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
MFGE8-213ENST00000560553 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
MFGE8-213ENST00000560553 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
MFGE8-213ENST00000560553 ZPR1O75312 459 aa12.14□□□□□ -0.47
MFGE8-213ENST00000560553 COL15A1P39059 1388 aa12.14□□□□□ -0.47
MFGE8-213ENST00000560553 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
MFGE8-213ENST00000560553 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
MFGE8-213ENST00000560553 DDR1Q08345 913 aa12.13□□□□□ -0.47
MFGE8-213ENST00000560553 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
MFGE8-213ENST00000560553 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
MFGE8-213ENST00000560553 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
MFGE8-213ENST00000560553 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms