RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ERVV-2B6SEH9 535 aa23.84■■□□□ 1.41
CRTC3-208ENST00000560098 GNPATO15228 680 aa23.84■■□□□ 1.41
CRTC3-208ENST00000560098 HSP90AB1P08238 724 aaKnown RBP23.84■■□□□ 1.41
CRTC3-208ENST00000560098 PLEKHO1Q53GL0 409 aaPredicted RBP23.84■■□□□ 1.41
CRTC3-208ENST00000560098 MORC1Q86VD1 984 aa23.84■■□□□ 1.41
CRTC3-208ENST00000560098 C1QTNF8P60827 252 aa23.84■■□□□ 1.41
CRTC3-208ENST00000560098 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
CRTC3-208ENST00000560098 AMOTQ4VCS5 1084 aa23.82■■□□□ 1.4
CRTC3-208ENST00000560098 KDRP35968 1356 aa23.8■■□□□ 1.4
CRTC3-208ENST00000560098 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
CRTC3-208ENST00000560098 KNSTRNQ9Y448 316 aa23.8■■□□□ 1.4
CRTC3-208ENST00000560098 GIGYF1O75420 1035 aaPredicted RBP23.79■■□□□ 1.4
CRTC3-208ENST00000560098 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
CRTC3-208ENST00000560098 SLC4A9Q96Q91 983 aa23.78■■□□□ 1.4
CRTC3-208ENST00000560098 RBM42Q9BTD8 480 aaKnown RBP23.78■■□□□ 1.4
CRTC3-208ENST00000560098 KDM6AO15550 1401 aaPredicted RBP23.78■■□□□ 1.4
CRTC3-208ENST00000560098 CABP4P57796 275 aa23.77■■□□□ 1.4
CRTC3-208ENST00000560098 RTCBQ9Y3I0 505 aaKnown RBP23.77■■□□□ 1.4
CRTC3-208ENST00000560098 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
CRTC3-208ENST00000560098 MTHFSP49914 203 aa23.76■■□□□ 1.39
CRTC3-208ENST00000560098 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
CRTC3-208ENST00000560098 TRAPPC3LQ5T215 181 aa23.76■■□□□ 1.39
CRTC3-208ENST00000560098 SULT6B1Q6IMI4 303 aa23.76■■□□□ 1.39
CRTC3-208ENST00000560098 ZNF831Q5JPB2 1677 aa23.75■■□□□ 1.39
CRTC3-208ENST00000560098 RC3H1Q5TC82 1133 aaKnown RBP23.75■■□□□ 1.39
CRTC3-208ENST00000560098 MMP10P09238 476 aa23.74■■□□□ 1.39
CRTC3-208ENST00000560098 IL13P35225 146 aa23.73■■□□□ 1.39
CRTC3-208ENST00000560098 CNTNAP4Q9C0A0 1308 aa23.73■■□□□ 1.39
CRTC3-208ENST00000560098 ADRA2BP18089 450 aa23.72■■□□□ 1.39
CRTC3-208ENST00000560098 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
CRTC3-208ENST00000560098 WWC3Q9ULE0 1092 aa23.72■■□□□ 1.39
CRTC3-208ENST00000560098 ATP10DQ9P241 1426 aa23.71■■□□□ 1.39
CRTC3-208ENST00000560098 NLGN1Q8N2Q7 840 aa23.71■■□□□ 1.39
CRTC3-208ENST00000560098 ARHGEF1Q92888 912 aaKnown RBP23.71■■□□□ 1.39
CRTC3-208ENST00000560098 NFATC2IPQ8NCF5 419 aa23.7■■□□□ 1.38
CRTC3-208ENST00000560098 KIF7Q2M1P5 1343 aa23.69■■□□□ 1.38
CRTC3-208ENST00000560098 PTCD1O75127 700 aaKnown RBP23.69■■□□□ 1.38
CRTC3-208ENST00000560098 RPS6KA4O75676 772 aa23.69■■□□□ 1.38
CRTC3-208ENST00000560098 COL5A3P25940 1745 aaPredicted RBP23.69■■□□□ 1.38
CRTC3-208ENST00000560098 RFC4P35249 363 aa23.67■■□□□ 1.38
CRTC3-208ENST00000560098 ADCY9O60503 1353 aa23.67■■□□□ 1.38
CRTC3-208ENST00000560098 GYS1P13807 737 aa23.67■■□□□ 1.38
CRTC3-208ENST00000560098 CICQ96RK0 1608 aaPredicted RBP23.66■■□□□ 1.38
CRTC3-208ENST00000560098 PXDNLA1KZ92 1463 aa23.65■■□□□ 1.38
CRTC3-208ENST00000560098 TGFB2P61812 414 aa23.65■■□□□ 1.38
CRTC3-208ENST00000560098 AKAP4Q5JQC9 854 aa23.65■■□□□ 1.38
CRTC3-208ENST00000560098 GPBP1L1Q9HC44 474 aaPredicted RBP23.65■■□□□ 1.38
CRTC3-208ENST00000560098 CRKLP46109 303 aaKnown RBP23.64■■□□□ 1.37
CRTC3-208ENST00000560098 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
CRTC3-208ENST00000560098 CCDC87Q9NVE4 849 aa23.63■■□□□ 1.37
CRTC3-208ENST00000560098 KIF13BQ9NQT8 1826 aa23.62■■□□□ 1.37
CRTC3-208ENST00000560098 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
CRTC3-208ENST00000560098 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
CRTC3-208ENST00000560098 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
CRTC3-208ENST00000560098 A0A0G2JLW4 131 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 HMOX1P09601 288 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 ZNF526Q8TF50 670 aaPredicted RBP23.6■■□□□ 1.37
CRTC3-208ENST00000560098 SLC52A2Q9HAB3 445 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 LGR6Q9HBX8 967 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 C4AP0C0L4 1744 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 SCN11AQ9UI33 1791 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 KIAA1551Q9HCM1 1747 aa23.6■■□□□ 1.37
CRTC3-208ENST00000560098 CC2D1BQ5T0F9 858 aaKnown RBP23.59■■□□□ 1.37
CRTC3-208ENST00000560098 BCS1LQ9Y276 419 aa23.59■■□□□ 1.37
CRTC3-208ENST00000560098 TJP1Q07157 1748 aa23.58■■□□□ 1.37
CRTC3-208ENST00000560098 SRP68Q9UHB9 627 aaKnown RBP23.58■■□□□ 1.36
CRTC3-208ENST00000560098 USP42Q9H9J4 1324 aaKnown RBP23.57■■□□□ 1.36
CRTC3-208ENST00000560098 RNMTO43148 476 aaKnown RBP23.57■■□□□ 1.36
CRTC3-208ENST00000560098 DIAPH1O60610 1272 aaKnown RBP23.57■■□□□ 1.36
CRTC3-208ENST00000560098 DPEP1P16444 411 aa23.57■■□□□ 1.36
CRTC3-208ENST00000560098 INTS5Q6P9B9 1019 aaKnown RBP23.57■■□□□ 1.36
CRTC3-208ENST00000560098 N4BP2Q86UW6 1770 aaPredicted RBP23.56■■□□□ 1.36
CRTC3-208ENST00000560098 FKBP8Q14318 412 aa23.56■■□□□ 1.36
CRTC3-208ENST00000560098 DNAJC10Q8IXB1 793 aa23.56■■□□□ 1.36
CRTC3-208ENST00000560098 MRC1P22897 1456 aa23.56■■□□□ 1.36
CRTC3-208ENST00000560098 MTHFSDQ2M296 383 aaKnown RBP23.55■■□□□ 1.36
CRTC3-208ENST00000560098 CEP350Q5VT06 3117 aa23.55■■□□□ 1.36
CRTC3-208ENST00000560098 FCHSD2O94868 740 aa23.53■■□□□ 1.36
CRTC3-208ENST00000560098 SLC39A6Q13433 755 aa23.53■■□□□ 1.36
CRTC3-208ENST00000560098 DDR1Q08345 913 aa23.52■■□□□ 1.36
CRTC3-208ENST00000560098 CYP19A1P11511 503 aaPredicted RBP23.51■■□□□ 1.35
CRTC3-208ENST00000560098 KCNA3P22001 575 aa23.51■■□□□ 1.35
CRTC3-208ENST00000560098 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
CRTC3-208ENST00000560098 ZPR1O75312 459 aa23.5■■□□□ 1.35
CRTC3-208ENST00000560098 SOS1Q07889 1333 aaPredicted RBP23.5■■□□□ 1.35
CRTC3-208ENST00000560098 NPC1L1Q9UHC9 1359 aa23.5■■□□□ 1.35
CRTC3-208ENST00000560098 ADAMTS7Q9UKP4 1686 aa23.5■■□□□ 1.35
CRTC3-208ENST00000560098 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
CRTC3-208ENST00000560098 TM4SF1P30408 202 aa23.49■■□□□ 1.35
CRTC3-208ENST00000560098 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
CRTC3-208ENST00000560098 PIM2Q9P1W9 311 aa23.49■■□□□ 1.35
CRTC3-208ENST00000560098 COL3A1P02461 1466 aaPredicted RBP23.48■■□□□ 1.35
CRTC3-208ENST00000560098 POLRMTO00411 1230 aaKnown RBP23.48■■□□□ 1.35
CRTC3-208ENST00000560098 KIF3CO14782 793 aa23.48■■□□□ 1.35
CRTC3-208ENST00000560098 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
CRTC3-208ENST00000560098 VSIG10Q8N0Z9 540 aa23.48■■□□□ 1.35
CRTC3-208ENST00000560098 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
CRTC3-208ENST00000560098 U2SURPO15042 1029 aaKnown RBP23.46■■□□□ 1.35
CRTC3-208ENST00000560098 HSPA6P17066 643 aa23.46■■□□□ 1.35
CRTC3-208ENST00000560098 DALRD3Q5D0E6 543 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms