RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 COL17A1Q9UMD9 1497 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 UBR1Q8IWV7 1749 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 RPGRIP1LQ68CZ1 1315 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 GOLGA6CA6NDK9 693 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 GOLGA6BA6NDN3 693 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 GOLGA6DP0CG33 693 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 CCDC96Q2M329 555 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 MYSM1Q5VVJ2 828 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 CCDC85AQ96PX6 553 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 GOLGA6AQ9NYA3 693 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 SDR16C5Q8N3Y7 309 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 C1orf131Q8NDD1 294 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 EXOC5O00471 708 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 ODR4Q5SWX8 454 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 NEUROD6Q96NK8 337 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 ACBD3Q9H3P7 528 aa7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 DDX56Q9NY93 547 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-206ENST00000559175 GPATCH8Q9UKJ3 1502 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-206ENST00000559175 PRC1O43663 620 aa7.24□□□□□ -1.25
CTDSPL2-206ENST00000559175 CASC1Q6TDU7 716 aa7.24□□□□□ -1.25
CTDSPL2-206ENST00000559175 RASEFQ8IZ41 740 aa7.24□□□□□ -1.25
CTDSPL2-206ENST00000559175 TINF2Q9BSI4 451 aa7.24□□□□□ -1.25
CTDSPL2-206ENST00000559175 FGD6Q6ZV73 1430 aa7.24□□□□□ -1.25
CTDSPL2-206ENST00000559175 CFAP69A5D8W1 941 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 TSC1Q92574 1164 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 ALKQ9UM73 1620 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 NPATQ14207 1427 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 GIGYF1O75420 1035 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 SSTR3P32745 418 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 CLK2P49760 499 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 PPP4CP60510 307 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 SAFB2Q14151 953 aaKnown RBP eCLIP7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 IL17RAQ96F46 866 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 SH3BP1Q9Y3L3 701 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 E9PCH4 1651 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 LDHAP00338 332 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 PRDM4Q9UKN5 801 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 RBM19Q9Y4C8 960 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 SPHKAPQ2M3C7 1700 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 ARHGAP31Q2M1Z3 1444 aa7.23□□□□□ -1.25
CTDSPL2-206ENST00000559175 TTC36A6NLP5 189 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 ATG7O95352 703 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 SYCP2LQ5T4T6 812 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 PAGR1Q9BTK6 254 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 ZMIZ1Q9ULJ6 1067 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 TTF2Q9UNY4 1162 aaKnown RBP7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 FBXO33Q7Z6M2 555 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 DIP2AQ14689 1571 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 PDE4AP27815 886 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 DHX8Q14562 1220 aaKnown RBP7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 PNISRQ8TF01 805 aaKnown RBP7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 CUEDC1Q9NWM3 386 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 TSPOAP1O95153 1857 aa7.22□□□□□ -1.25
CTDSPL2-206ENST00000559175 ABL1P00519 1130 aa7.21□□□□□ -1.25
CTDSPL2-206ENST00000559175 PAF1Q8N7H5 531 aa7.21□□□□□ -1.25
CTDSPL2-206ENST00000559175 LRRC27Q9C0I9 530 aa7.21□□□□□ -1.25
CTDSPL2-206ENST00000559175 PHF8Q9UPP1 1060 aa7.21□□□□□ -1.25
CTDSPL2-206ENST00000559175 ATP7AQ04656 1500 aa7.21□□□□□ -1.25
CTDSPL2-206ENST00000559175 CDK13Q14004 1512 aaKnown RBP7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 CALRP27797 417 aaKnown RBP7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 JPH4Q96JJ6 628 aa7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 MMP14P50281 582 aa7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 SEMA3FQ13275 785 aa7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZCRB1Q8TBF4 217 aaKnown RBP7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 SLAIN2Q9P270 581 aa7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 MED14O60244 1454 aa7.21□□□□□ -1.26
CTDSPL2-206ENST00000559175 TTC39BQ5VTQ0 682 aaPredicted RBP7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 B4GALNT3Q6L9W6 998 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 PLA2R1Q13018 1463 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 TCERG1O14776 1098 aaKnown RBP7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 NBPF1Q3BBV0 1214 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 C10orf62Q5T681 223 aaPredicted RBP7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 LIMD1Q9UGP4 676 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 VAMP1P23763 118 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZNF211Q13398 564 aaPredicted RBP7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 DNTTIP2Q5QJE6 756 aaKnown RBP7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 CCSER2Q9H7U1 834 aa7.2□□□□□ -1.26
CTDSPL2-206ENST00000559175 SLIT1O75093 1534 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 AP1G2O75843 785 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 CC2D1AQ6P1N0 951 aaPredicted RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 TMEM87AQ8NBN3 555 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 ZNF512BQ96KM6 892 aaPredicted RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 PHOX2BQ99453 314 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 IER2Q9BTL4 223 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 INO80BQ9C086 356 aaPredicted RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 SWAP70Q9UH65 585 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 SCAMP3O14828 347 aaKnown RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 CBLBQ13191 982 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 ARPC5LQ9BPX5 153 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 ISY1Q9ULR0 285 aaKnown RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 CD109Q6YHK3 1445 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 DUOX2Q9NRD8 1548 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 CD53P19397 219 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 CAMK2BQ13554 666 aa7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 TRIM44Q96DX7 344 aaPredicted RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 PUF60Q9UHX1 559 aaKnown RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 MAFBQ9Y5Q3 323 aaPredicted RBP7.19□□□□□ -1.26
CTDSPL2-206ENST00000559175 NPHP1O15259 732 aa7.18□□□□□ -1.26
CTDSPL2-206ENST00000559175 ICE2Q659A1 982 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms