RNA–Protein interactions for RNA: ENST00000559160.1

RNF111-205, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-205ENST00000559160 FAM9BQ8IZU0 186 aa30.24■■■□□ 2.43
RNF111-205ENST00000559160 ATG3Q9NT62 314 aa30.24■■■□□ 2.43
RNF111-205ENST00000559160 RRP7AQ9Y3A4 280 aaKnown RBP30.24■■■□□ 2.43
RNF111-205ENST00000559160 APAF1O14727 1248 aa30.22■■■□□ 2.43
RNF111-205ENST00000559160 SMARCC1Q92922 1105 aaPredicted RBP30.22■■■□□ 2.43
RNF111-205ENST00000559160 MRC1P22897 1456 aa30.22■■■□□ 2.43
RNF111-205ENST00000559160 NEUROD2Q15784 382 aa30.21■■■□□ 2.43
RNF111-205ENST00000559160 PALLDQ8WX93 1383 aa30.2■■■□□ 2.43
RNF111-205ENST00000559160 TEFQ10587 303 aa30.2■■■□□ 2.43
RNF111-205ENST00000559160 RGPD3A6NKT7 1758 aaPredicted RBP30.19■■■□□ 2.42
RNF111-205ENST00000559160 RGPD4Q7Z3J3 1758 aa30.19■■■□□ 2.42
RNF111-205ENST00000559160 DLG5Q8TDM6 1919 aa30.18■■■□□ 2.42
RNF111-205ENST00000559160 THUMPD2Q9BTF0 503 aaKnown RBP30.17■■■□□ 2.42
RNF111-205ENST00000559160 LRRC4BQ9NT99 713 aa30.17■■■□□ 2.42
RNF111-205ENST00000559160 TRIM35Q9UPQ4 493 aa30.16■■■□□ 2.42
RNF111-205ENST00000559160 VIRMAQ69YN4 1812 aaKnown RBP30.16■■■□□ 2.42
RNF111-205ENST00000559160 KCNQ4P56696 695 aa30.15■■■□□ 2.42
RNF111-205ENST00000559160 LMOD3Q0VAK6 560 aa30.15■■■□□ 2.42
RNF111-205ENST00000559160 SLC27A3Q5K4L6 730 aa30.15■■■□□ 2.42
RNF111-205ENST00000559160 SLC39A6Q13433 755 aa30.14■■■□□ 2.42
RNF111-205ENST00000559160 CCNL1Q9UK58 526 aaPredicted RBP30.14■■■□□ 2.42
RNF111-205ENST00000559160 RREB1Q92766 1687 aa30.13■■■□□ 2.41
RNF111-205ENST00000559160 LOC102724428A0A0B4J2F2 783 aa30.12■■■□□ 2.41
RNF111-205ENST00000559160 SIK1P57059 783 aa30.12■■■□□ 2.41
RNF111-205ENST00000559160 LY75O60449 1722 aa30.12■■■□□ 2.41
RNF111-205ENST00000559160 TAF7Q15545 349 aaPredicted RBP30.11■■■□□ 2.41
RNF111-205ENST00000559160 SENP3-EIF4A1A0A087X0R7 540 aa30.1■■■□□ 2.41
RNF111-205ENST00000559160 BTBD11A6QL63 1104 aa30.1■■■□□ 2.41
RNF111-205ENST00000559160 SLC4A9Q96Q91 983 aa30.1■■■□□ 2.41
RNF111-205ENST00000559160 PTCD1O75127 700 aaKnown RBP30.09■■■□□ 2.41
RNF111-205ENST00000559160 RBM42Q9BTD8 480 aaKnown RBP30.09■■■□□ 2.41
RNF111-205ENST00000559160 SIPA1L3O60292 1781 aaPredicted RBP30.08■■■□□ 2.41
RNF111-205ENST00000559160 ZNF790Q6PG37 636 aa30.08■■■□□ 2.41
RNF111-205ENST00000559160 NUP188Q5SRE5 1749 aa30.08■■■□□ 2.41
RNF111-205ENST00000559160 KCNQ3O43525 872 aa30.06■■■□□ 2.4
RNF111-205ENST00000559160 ATP6V1AP38606 617 aa30.06■■■□□ 2.4
RNF111-205ENST00000559160 NBPF14Q5TI25 921 aa30.06■■■□□ 2.4
RNF111-205ENST00000559160 MIS18AQ9NYP9 233 aa30.06■■■□□ 2.4
RNF111-205ENST00000559160 ITPK1Q13572 414 aa30.05■■■□□ 2.4
RNF111-205ENST00000559160 ANO8Q9HCE9 1232 aaPredicted RBP30.05■■■□□ 2.4
RNF111-205ENST00000559160 PAPPAQ13219 1627 aa30.04■■■□□ 2.4
RNF111-205ENST00000559160 NCBP3Q53F19 620 aaKnown RBP30.04■■■□□ 2.4
RNF111-205ENST00000559160 TTC5Q8N0Z6 440 aa30.04■■■□□ 2.4
RNF111-205ENST00000559160 CCDC27Q2M243 656 aa30.03■■■□□ 2.4
RNF111-205ENST00000559160 KCPQ6ZWJ8 1503 aa30.02■■■□□ 2.4
RNF111-205ENST00000559160 ZNF496Q96IT1 587 aaPredicted RBP30.02■■■□□ 2.4
RNF111-205ENST00000559160 LINC00116Q8NCU8 138 aa30■■■□□ 2.39
RNF111-205ENST00000559160 AKT1S1Q96B36 256 aa30■■■□□ 2.39
RNF111-205ENST00000559160 STK32BQ9NY57 414 aa30■■■□□ 2.39
RNF111-205ENST00000559160 HMGB2P26583 209 aaKnown RBP29.99■■■□□ 2.39
RNF111-205ENST00000559160 SLC15A2Q16348 729 aa29.99■■■□□ 2.39
RNF111-205ENST00000559160 ZNF827Q17R98 1081 aa29.99■■■□□ 2.39
RNF111-205ENST00000559160 BABAM1Q9NWV8 329 aa29.99■■■□□ 2.39
RNF111-205ENST00000559160 WWC1Q8IX03 1113 aa29.98■■■□□ 2.39
RNF111-205ENST00000559160 VSIG10Q8N0Z9 540 aa29.98■■■□□ 2.39
RNF111-205ENST00000559160 FMNL2Q96PY5 1086 aa29.98■■■□□ 2.39
RNF111-205ENST00000559160 SALL2Q9Y467 1007 aaPredicted RBP29.98■■■□□ 2.39
RNF111-205ENST00000559160 R3HDM1Q15032 1099 aaKnown RBP29.97■■■□□ 2.39
RNF111-205ENST00000559160 ZNF831Q5JPB2 1677 aa29.97■■■□□ 2.39
RNF111-205ENST00000559160 UBR2Q8IWV8 1755 aa29.96■■■□□ 2.39
RNF111-205ENST00000559160 HEG1Q9ULI3 1381 aa29.96■■■□□ 2.39
RNF111-205ENST00000559160 CHL1O00533 1208 aa29.96■■■□□ 2.39
RNF111-205ENST00000559160 DNAJC10Q8IXB1 793 aa29.96■■■□□ 2.39
RNF111-205ENST00000559160 TSPYL4Q9UJ04 414 aa29.96■■■□□ 2.39
RNF111-205ENST00000559160 PSDA5PKW4 1024 aaPredicted RBP29.95■■■□□ 2.39
RNF111-205ENST00000559160 CALD1Q05682 793 aaKnown RBP29.94■■■□□ 2.38
RNF111-205ENST00000559160 NGEFQ8N5V2 710 aa29.94■■■□□ 2.38
RNF111-205ENST00000559160 CFAP44Q96MT7 982 aa29.94■■■□□ 2.38
RNF111-205ENST00000559160 LAS1LQ9Y4W2 734 aaKnown RBP29.94■■■□□ 2.38
RNF111-205ENST00000559160 C5P01031 1676 aa29.93■■■□□ 2.38
RNF111-205ENST00000559160 ZNF853P0CG23 659 aa29.93■■■□□ 2.38
RNF111-205ENST00000559160 EIF4A1P60842 406 aaKnown RBP29.93■■■□□ 2.38
RNF111-205ENST00000559160 TAF1LQ8IZX4 1826 aa29.93■■■□□ 2.38
RNF111-205ENST00000559160 TFCP2L1Q9NZI6 479 aa29.91■■■□□ 2.38
RNF111-205ENST00000559160 KDM3BQ7LBC6 1761 aa29.9■■■□□ 2.38
RNF111-205ENST00000559160 CYP19A1P11511 503 aaPredicted RBP29.9■■■□□ 2.38
RNF111-205ENST00000559160 RC3H1Q5TC82 1133 aaKnown RBP29.9■■■□□ 2.38
RNF111-205ENST00000559160 IFT57Q9NWB7 429 aa29.9■■■□□ 2.38
RNF111-205ENST00000559160 C4BP0C0L5 1744 aa29.9■■■□□ 2.38
RNF111-205ENST00000559160 TJP1Q07157 1748 aa29.9■■■□□ 2.38
RNF111-205ENST00000559160 SNRPA1P09661 255 aaKnown RBP29.89■■■□□ 2.38
RNF111-205ENST00000559160 GNAI1P63096 354 aa29.89■■■□□ 2.38
RNF111-205ENST00000559160 AK7Q96M32 723 aa29.89■■■□□ 2.38
RNF111-205ENST00000559160 TEX13AQ9BXU3 409 aaPredicted RBP29.89■■■□□ 2.38
RNF111-205ENST00000559160 CNTNAP4Q9C0A0 1308 aa29.89■■■□□ 2.38
RNF111-205ENST00000559160 CICQ96RK0 1608 aaPredicted RBP29.89■■■□□ 2.37
RNF111-205ENST00000559160 PRAMEF22A3QJZ6 481 aa29.88■■■□□ 2.37
RNF111-205ENST00000559160 CRKLP46109 303 aaKnown RBP29.88■■■□□ 2.37
RNF111-205ENST00000559160 WDR63Q8IWG1 891 aa29.88■■■□□ 2.37
RNF111-205ENST00000559160 INTS5Q6P9B9 1019 aaKnown RBP29.87■■■□□ 2.37
RNF111-205ENST00000559160 AMIGO3Q86WK7 504 aa29.87■■■□□ 2.37
RNF111-205ENST00000559160 MBIPQ9NS73 344 aa29.87■■■□□ 2.37
RNF111-205ENST00000559160 GIGYF1O75420 1035 aaPredicted RBP29.86■■■□□ 2.37
RNF111-205ENST00000559160 USP16Q9Y5T5 823 aa29.86■■■□□ 2.37
RNF111-205ENST00000559160 COL5A3P25940 1745 aaPredicted RBP29.85■■■□□ 2.37
RNF111-205ENST00000559160 STARD3NLO95772 234 aa29.85■■■□□ 2.37
RNF111-205ENST00000559160 PDGFDQ9GZP0 370 aaPredicted RBP29.85■■■□□ 2.37
RNF111-205ENST00000559160 IL16Q14005 1332 aa29.85■■■□□ 2.37
RNF111-205ENST00000559160 PNPLA7Q6ZV29 1317 aa29.85■■■□□ 2.37
RNF111-205ENST00000559160 GNPATO15228 680 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms