RNA–Protein interactions for RNA: ENST00000558005.1

CRTC3-203, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-203ENST00000558005 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
CRTC3-203ENST00000558005 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
CRTC3-203ENST00000558005 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
CRTC3-203ENST00000558005 TOMM70O94826 608 aa16.52■□□□□ 0.24
CRTC3-203ENST00000558005 PHKG2P15735 406 aa16.52■□□□□ 0.24
CRTC3-203ENST00000558005 TRAPPC3LQ5T215 181 aa16.52■□□□□ 0.24
CRTC3-203ENST00000558005 PXDNLA1KZ92 1463 aa16.52■□□□□ 0.23
CRTC3-203ENST00000558005 C10orf71Q711Q0 1435 aa16.52■□□□□ 0.23
CRTC3-203ENST00000558005 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
CRTC3-203ENST00000558005 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
CRTC3-203ENST00000558005 KDRP35968 1356 aa16.51■□□□□ 0.23
CRTC3-203ENST00000558005 KIF3CO14782 793 aa16.5■□□□□ 0.23
CRTC3-203ENST00000558005 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
CRTC3-203ENST00000558005 EYA1Q99502 592 aa16.5■□□□□ 0.23
CRTC3-203ENST00000558005 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
CRTC3-203ENST00000558005 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
CRTC3-203ENST00000558005 RFC4P35249 363 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 ITPK1Q13572 414 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
CRTC3-203ENST00000558005 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 BCS1LQ9Y276 419 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 PARP3Q9Y6F1 533 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 C4AP0C0L4 1744 aa16.48■□□□□ 0.23
CRTC3-203ENST00000558005 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
CRTC3-203ENST00000558005 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.23
CRTC3-203ENST00000558005 RPS6KA4O75676 772 aa16.45■□□□□ 0.22
CRTC3-203ENST00000558005 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
CRTC3-203ENST00000558005 RBM46Q8TBY0 533 aaKnown RBP16.45■□□□□ 0.22
CRTC3-203ENST00000558005 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
CRTC3-203ENST00000558005 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
CRTC3-203ENST00000558005 FCHSD2O94868 740 aa16.44■□□□□ 0.22
CRTC3-203ENST00000558005 FSTL1Q12841 308 aa16.44■□□□□ 0.22
CRTC3-203ENST00000558005 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
CRTC3-203ENST00000558005 KIAA1551Q9HCM1 1747 aa16.44■□□□□ 0.22
CRTC3-203ENST00000558005 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
CRTC3-203ENST00000558005 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
CRTC3-203ENST00000558005 CABP4P57796 275 aa16.43■□□□□ 0.22
CRTC3-203ENST00000558005 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
CRTC3-203ENST00000558005 C1orf141Q5JVX7 400 aa16.43■□□□□ 0.22
CRTC3-203ENST00000558005 PIM2Q9P1W9 311 aa16.43■□□□□ 0.22
CRTC3-203ENST00000558005 WWC3Q9ULE0 1092 aa16.43■□□□□ 0.22
CRTC3-203ENST00000558005 GYS1P13807 737 aa16.42■□□□□ 0.22
CRTC3-203ENST00000558005 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
CRTC3-203ENST00000558005 A0A0G2JLW4 131 aa16.41■□□□□ 0.22
CRTC3-203ENST00000558005 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
CRTC3-203ENST00000558005 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
CRTC3-203ENST00000558005 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
CRTC3-203ENST00000558005 N4BP2Q86UW6 1770 aaPredicted RBP16.41■□□□□ 0.22
CRTC3-203ENST00000558005 DPEP1P16444 411 aa16.4■□□□□ 0.22
CRTC3-203ENST00000558005 MTHFSP49914 203 aa16.39■□□□□ 0.21
CRTC3-203ENST00000558005 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
CRTC3-203ENST00000558005 TNRC6CQ9HCJ0 1690 aaKnown RBP16.38■□□□□ 0.21
CRTC3-203ENST00000558005 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
CRTC3-203ENST00000558005 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
CRTC3-203ENST00000558005 USP42Q9H9J4 1324 aaKnown RBP16.38■□□□□ 0.21
CRTC3-203ENST00000558005 CLSPNQ9HAW4 1339 aa16.38■□□□□ 0.21
CRTC3-203ENST00000558005 KDM6AO15550 1401 aaPredicted RBP16.37■□□□□ 0.21
CRTC3-203ENST00000558005 NMRK2Q9NPI5 230 aa16.37■□□□□ 0.21
CRTC3-203ENST00000558005 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
CRTC3-203ENST00000558005 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
CRTC3-203ENST00000558005 ZPR1O75312 459 aa16.35■□□□□ 0.21
CRTC3-203ENST00000558005 SMC1BQ8NDV3 1235 aa16.35■□□□□ 0.21
CRTC3-203ENST00000558005 KLRG1Q96E93 195 aa16.35■□□□□ 0.21
CRTC3-203ENST00000558005 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
CRTC3-203ENST00000558005 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
CRTC3-203ENST00000558005 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-203ENST00000558005 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.2
CRTC3-203ENST00000558005 JMYQ8N9B5 988 aa16.33■□□□□ 0.2
CRTC3-203ENST00000558005 KCNA3P22001 575 aa16.32■□□□□ 0.2
CRTC3-203ENST00000558005 MYH14Q7Z406 1995 aaKnown RBP16.32■□□□□ 0.2
CRTC3-203ENST00000558005 KCPQ6ZWJ8 1503 aa16.31■□□□□ 0.2
CRTC3-203ENST00000558005 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
CRTC3-203ENST00000558005 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
CRTC3-203ENST00000558005 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
CRTC3-203ENST00000558005 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
CRTC3-203ENST00000558005 FKBP8Q14318 412 aa16.3■□□□□ 0.2
CRTC3-203ENST00000558005 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
CRTC3-203ENST00000558005 TJP1Q07157 1748 aa16.3■□□□□ 0.2
CRTC3-203ENST00000558005 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
CRTC3-203ENST00000558005 POLRMTO00411 1230 aaKnown RBP16.29■□□□□ 0.2
CRTC3-203ENST00000558005 LMNB1P20700 586 aa16.29■□□□□ 0.2
CRTC3-203ENST00000558005 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
CRTC3-203ENST00000558005 DDR1Q08345 913 aa16.29■□□□□ 0.2
CRTC3-203ENST00000558005 MRC1P22897 1456 aa16.29■□□□□ 0.2
CRTC3-203ENST00000558005 SOS1Q07889 1333 aaPredicted RBP16.28■□□□□ 0.2
CRTC3-203ENST00000558005 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
CRTC3-203ENST00000558005 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
CRTC3-203ENST00000558005 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
CRTC3-203ENST00000558005 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
CRTC3-203ENST00000558005 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
CRTC3-203ENST00000558005 TM4SF1P30408 202 aa16.27■□□□□ 0.2
CRTC3-203ENST00000558005 INTS5Q6P9B9 1019 aaKnown RBP16.27■□□□□ 0.2
CRTC3-203ENST00000558005 PANK3Q9H999 370 aa16.27■□□□□ 0.2
CRTC3-203ENST00000558005 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
CRTC3-203ENST00000558005 NARFQ9UHQ1 456 aa16.27■□□□□ 0.2
CRTC3-203ENST00000558005 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
CRTC3-203ENST00000558005 COL15A1P39059 1388 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms