RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 COL5A3P25940 1745 aaPredicted RBP25.57■■□□□ 1.68
ABCD4-228ENST00000557588 MMP10P09238 476 aa25.57■■□□□ 1.68
ABCD4-228ENST00000557588 CARD14Q9BXL6 1004 aa25.57■■□□□ 1.68
ABCD4-228ENST00000557588 ASAP1Q9ULH1 1129 aa25.57■■□□□ 1.68
ABCD4-228ENST00000557588 BRCA1P38398 1863 aaKnown RBP25.57■■□□□ 1.68
ABCD4-228ENST00000557588 WASHC2AQ641Q2 1341 aa25.57■■□□□ 1.68
ABCD4-228ENST00000557588 C4AP0C0L4 1744 aa25.55■■□□□ 1.68
ABCD4-228ENST00000557588 PHKG2P15735 406 aa25.55■■□□□ 1.68
ABCD4-228ENST00000557588 ATP6V1AP38606 617 aa25.55■■□□□ 1.68
ABCD4-228ENST00000557588 EYA1Q99502 592 aa25.54■■□□□ 1.68
ABCD4-228ENST00000557588 APLP1P51693 650 aa25.53■■□□□ 1.68
ABCD4-228ENST00000557588 TGFB2P61812 414 aa25.53■■□□□ 1.68
ABCD4-228ENST00000557588 IFNL2Q8IZJ0 200 aa25.53■■□□□ 1.68
ABCD4-228ENST00000557588 ATG3Q9NT62 314 aa25.53■■□□□ 1.68
ABCD4-228ENST00000557588 PPM1GO15355 546 aaPredicted RBP25.52■■□□□ 1.68
ABCD4-228ENST00000557588 TOMM70O94826 608 aa25.5■■□□□ 1.67
ABCD4-228ENST00000557588 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
ABCD4-228ENST00000557588 NLGN1Q8N2Q7 840 aa25.49■■□□□ 1.67
ABCD4-228ENST00000557588 RTCBQ9Y3I0 505 aaKnown RBP25.49■■□□□ 1.67
ABCD4-228ENST00000557588 WDR90Q96KV7 1748 aa25.49■■□□□ 1.67
ABCD4-228ENST00000557588 ADRA2BP18089 450 aa25.48■■□□□ 1.67
ABCD4-228ENST00000557588 BCS1LQ9Y276 419 aa25.48■■□□□ 1.67
ABCD4-228ENST00000557588 TRAPPC3LQ5T215 181 aa25.47■■□□□ 1.67
ABCD4-228ENST00000557588 CNTNAP4Q9C0A0 1308 aa25.46■■□□□ 1.67
ABCD4-228ENST00000557588 A0A0G2JLW4 131 aa25.46■■□□□ 1.67
ABCD4-228ENST00000557588 DNAJC5GQ8N7S2 189 aa25.46■■□□□ 1.67
ABCD4-228ENST00000557588 SLC4A9Q96Q91 983 aa25.46■■□□□ 1.67
ABCD4-228ENST00000557588 POLKQ9UBT6 870 aa25.46■■□□□ 1.67
ABCD4-228ENST00000557588 RC3H1Q5TC82 1133 aaKnown RBP25.45■■□□□ 1.66
ABCD4-228ENST00000557588 CCDC87Q9NVE4 849 aa25.45■■□□□ 1.66
ABCD4-228ENST00000557588 GYS1P13807 737 aa25.44■■□□□ 1.66
ABCD4-228ENST00000557588 ERVV-2B6SEH9 535 aa25.43■■□□□ 1.66
ABCD4-228ENST00000557588 DPEP1P16444 411 aa25.43■■□□□ 1.66
ABCD4-228ENST00000557588 ARHGEF1Q92888 912 aaKnown RBP25.43■■□□□ 1.66
ABCD4-228ENST00000557588 NMRK2Q9NPI5 230 aa25.43■■□□□ 1.66
ABCD4-228ENST00000557588 MYH14Q7Z406 1995 aaKnown RBP25.43■■□□□ 1.66
ABCD4-228ENST00000557588 EIF4A2Q14240 407 aaKnown RBP25.42■■□□□ 1.66
ABCD4-228ENST00000557588 ARHGAP27Q6ZUM4 889 aa25.42■■□□□ 1.66
ABCD4-228ENST00000557588 KDM6AO15550 1401 aaPredicted RBP25.42■■□□□ 1.66
ABCD4-228ENST00000557588 FCHSD2O94868 740 aa25.41■■□□□ 1.66
ABCD4-228ENST00000557588 RPS6KA4O75676 772 aa25.4■■□□□ 1.66
ABCD4-228ENST00000557588 DCAF5Q96JK2 942 aa25.4■■□□□ 1.66
ABCD4-228ENST00000557588 HSP90AB1P08238 724 aaKnown RBP25.39■■□□□ 1.66
ABCD4-228ENST00000557588 RFC4P35249 363 aa25.39■■□□□ 1.66
ABCD4-228ENST00000557588 RBM46Q8TBY0 533 aaKnown RBP25.39■■□□□ 1.66
ABCD4-228ENST00000557588 RBM42Q9BTD8 480 aaKnown RBP25.39■■□□□ 1.66
ABCD4-228ENST00000557588 PARP3Q9Y6F1 533 aa25.39■■□□□ 1.66
ABCD4-228ENST00000557588 TJP1Q07157 1748 aa25.38■■□□□ 1.65
ABCD4-228ENST00000557588 TNRC6CQ9HCJ0 1690 aaKnown RBP25.37■■□□□ 1.65
ABCD4-228ENST00000557588 KCNA3P22001 575 aa25.37■■□□□ 1.65
ABCD4-228ENST00000557588 C9orf131Q5VYM1 1079 aa25.36■■□□□ 1.65
ABCD4-228ENST00000557588 ADAMTS7Q9UKP4 1686 aa25.35■■□□□ 1.65
ABCD4-228ENST00000557588 KCPQ6ZWJ8 1503 aa25.34■■□□□ 1.65
ABCD4-228ENST00000557588 PIM2Q9P1W9 311 aa25.33■■□□□ 1.65
ABCD4-228ENST00000557588 FSTL1Q12841 308 aa25.32■■□□□ 1.64
ABCD4-228ENST00000557588 USP42Q9H9J4 1324 aaKnown RBP25.32■■□□□ 1.64
ABCD4-228ENST00000557588 CABP4P57796 275 aa25.31■■□□□ 1.64
ABCD4-228ENST00000557588 PLEKHO1Q53GL0 409 aaPredicted RBP25.31■■□□□ 1.64
ABCD4-228ENST00000557588 C16orf71Q8IYS4 520 aaPredicted RBP25.31■■□□□ 1.64
ABCD4-228ENST00000557588 KLRG1Q96E93 195 aa25.31■■□□□ 1.64
ABCD4-228ENST00000557588 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
ABCD4-228ENST00000557588 SBF1O95248 1867 aa25.3■■□□□ 1.64
ABCD4-228ENST00000557588 TNNT2P45379 298 aaPredicted RBP25.3■■□□□ 1.64
ABCD4-228ENST00000557588 CRKLP46109 303 aaKnown RBP25.3■■□□□ 1.64
ABCD4-228ENST00000557588 DDR1Q08345 913 aa25.3■■□□□ 1.64
ABCD4-228ENST00000557588 AMOTQ4VCS5 1084 aa25.3■■□□□ 1.64
ABCD4-228ENST00000557588 DALRD3Q5D0E6 543 aaKnown RBP25.3■■□□□ 1.64
ABCD4-228ENST00000557588 ZNF530Q6P9A1 599 aaPredicted RBP25.3■■□□□ 1.64
ABCD4-228ENST00000557588 FKBP8Q14318 412 aa25.29■■□□□ 1.64
ABCD4-228ENST00000557588 JMYQ8N9B5 988 aa25.29■■□□□ 1.64
ABCD4-228ENST00000557588 SRP68Q9UHB9 627 aaKnown RBP25.28■■□□□ 1.64
ABCD4-228ENST00000557588 PCNTO95613 3336 aa25.28■■□□□ 1.64
ABCD4-228ENST00000557588 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
ABCD4-228ENST00000557588 PTCD1O75127 700 aaKnown RBP25.27■■□□□ 1.64
ABCD4-228ENST00000557588 RNF181Q9P0P0 153 aa25.27■■□□□ 1.64
ABCD4-228ENST00000557588 HTRA3P83110 453 aa25.26■■□□□ 1.63
ABCD4-228ENST00000557588 DLEC1Q9Y238 1755 aa25.26■■□□□ 1.63
ABCD4-228ENST00000557588 MTHFSP49914 203 aa25.25■■□□□ 1.63
ABCD4-228ENST00000557588 NRXN2Q9P2S2 1712 aa25.24■■□□□ 1.63
ABCD4-228ENST00000557588 ZC3H4Q9UPT8 1303 aaKnown RBP25.24■■□□□ 1.63
ABCD4-228ENST00000557588 POLRMTO00411 1230 aaKnown RBP25.23■■□□□ 1.63
ABCD4-228ENST00000557588 CHRNA5P30532 468 aa25.23■■□□□ 1.63
ABCD4-228ENST00000557588 C1orf141Q5JVX7 400 aa25.23■■□□□ 1.63
ABCD4-228ENST00000557588 AEBP1Q8IUX7 1158 aa25.22■■□□□ 1.63
ABCD4-228ENST00000557588 NFATC2IPQ8NCF5 419 aa25.22■■□□□ 1.63
ABCD4-228ENST00000557588 MRC1P22897 1456 aa25.21■■□□□ 1.63
ABCD4-228ENST00000557588 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
ABCD4-228ENST00000557588 INTS5Q6P9B9 1019 aaKnown RBP25.21■■□□□ 1.63
ABCD4-228ENST00000557588 TIAM2Q8IVF5 1701 aa25.2■■□□□ 1.63
ABCD4-228ENST00000557588 TM4SF1P30408 202 aa25.2■■□□□ 1.62
ABCD4-228ENST00000557588 RRAGCQ9HB90 399 aa25.2■■□□□ 1.62
ABCD4-228ENST00000557588 COL13A1Q5TAT6 717 aaPredicted RBP25.19■■□□□ 1.62
ABCD4-228ENST00000557588 SMC1BQ8NDV3 1235 aa25.19■■□□□ 1.62
ABCD4-228ENST00000557588 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
ABCD4-228ENST00000557588 TIMELESSQ9UNS1 1208 aa25.18■■□□□ 1.62
ABCD4-228ENST00000557588 POLR3GLQ9BT43 218 aa25.16■■□□□ 1.62
ABCD4-228ENST00000557588 VIRMAQ69YN4 1812 aaKnown RBP25.15■■□□□ 1.62
ABCD4-228ENST00000557588 ZPR1O75312 459 aa25.15■■□□□ 1.62
ABCD4-228ENST00000557588 RASSF7Q02833 373 aa25.15■■□□□ 1.62
ABCD4-228ENST00000557588 USPL1Q5W0Q7 1092 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms