RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
SNX6-209ENST00000557265 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
SNX6-209ENST00000557265 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
SNX6-209ENST00000557265 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
SNX6-209ENST00000557265 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
SNX6-209ENST00000557265 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.32
SNX6-209ENST00000557265 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
SNX6-209ENST00000557265 ITGB4P16144 1822 aa17.02■□□□□ 0.31
SNX6-209ENST00000557265 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
SNX6-209ENST00000557265 ARHGEF1Q92888 912 aaKnown RBP17.01■□□□□ 0.31
SNX6-209ENST00000557265 SLC4A9Q96Q91 983 aa17.01■□□□□ 0.31
SNX6-209ENST00000557265 PXDNLA1KZ92 1463 aa17■□□□□ 0.31
SNX6-209ENST00000557265 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
SNX6-209ENST00000557265 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
SNX6-209ENST00000557265 ARHGAP27Q6ZUM4 889 aa16.99■□□□□ 0.31
SNX6-209ENST00000557265 KDRP35968 1356 aa16.99■□□□□ 0.31
SNX6-209ENST00000557265 GYS1P13807 737 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 DPEP1P16444 411 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 ADRA2BP18089 450 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 RFC4P35249 363 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
SNX6-209ENST00000557265 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 CCDC87Q9NVE4 849 aa16.98■□□□□ 0.31
SNX6-209ENST00000557265 RPS6KA4O75676 772 aa16.97■□□□□ 0.31
SNX6-209ENST00000557265 TOMM70O94826 608 aa16.97■□□□□ 0.31
SNX6-209ENST00000557265 FCHSD2O94868 740 aa16.97■□□□□ 0.31
SNX6-209ENST00000557265 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
SNX6-209ENST00000557265 APLP1P51693 650 aa16.97■□□□□ 0.31
SNX6-209ENST00000557265 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
SNX6-209ENST00000557265 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.31
SNX6-209ENST00000557265 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.31
SNX6-209ENST00000557265 CABP4P57796 275 aa16.96■□□□□ 0.31
SNX6-209ENST00000557265 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
SNX6-209ENST00000557265 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.3
SNX6-209ENST00000557265 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
SNX6-209ENST00000557265 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
SNX6-209ENST00000557265 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
SNX6-209ENST00000557265 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
SNX6-209ENST00000557265 KCNA3P22001 575 aa16.93■□□□□ 0.3
SNX6-209ENST00000557265 DNAJC5GQ8N7S2 189 aa16.93■□□□□ 0.3
SNX6-209ENST00000557265 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
SNX6-209ENST00000557265 MTHFSP49914 203 aa16.92■□□□□ 0.3
SNX6-209ENST00000557265 AMOTQ4VCS5 1084 aa16.92■□□□□ 0.3
SNX6-209ENST00000557265 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
SNX6-209ENST00000557265 KDM6AO15550 1401 aaPredicted RBP16.91■□□□□ 0.3
SNX6-209ENST00000557265 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
SNX6-209ENST00000557265 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
SNX6-209ENST00000557265 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
SNX6-209ENST00000557265 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
SNX6-209ENST00000557265 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
SNX6-209ENST00000557265 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
SNX6-209ENST00000557265 FKBP8Q14318 412 aa16.89■□□□□ 0.29
SNX6-209ENST00000557265 DALRD3Q5D0E6 543 aaKnown RBP16.89■□□□□ 0.29
SNX6-209ENST00000557265 C16orf71Q8IYS4 520 aaPredicted RBP16.89■□□□□ 0.29
SNX6-209ENST00000557265 RBM46Q8TBY0 533 aaKnown RBP16.89■□□□□ 0.29
SNX6-209ENST00000557265 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
SNX6-209ENST00000557265 DDR1Q08345 913 aa16.88■□□□□ 0.29
SNX6-209ENST00000557265 PANK3Q9H999 370 aa16.88■□□□□ 0.29
SNX6-209ENST00000557265 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
SNX6-209ENST00000557265 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
SNX6-209ENST00000557265 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
SNX6-209ENST00000557265 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
SNX6-209ENST00000557265 C4AP0C0L4 1744 aa16.87■□□□□ 0.29
SNX6-209ENST00000557265 CHRNA5P30532 468 aa16.86■□□□□ 0.29
SNX6-209ENST00000557265 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
SNX6-209ENST00000557265 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
SNX6-209ENST00000557265 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
SNX6-209ENST00000557265 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
SNX6-209ENST00000557265 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
SNX6-209ENST00000557265 HTRA3P83110 453 aa16.85■□□□□ 0.29
SNX6-209ENST00000557265 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
SNX6-209ENST00000557265 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
SNX6-209ENST00000557265 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
SNX6-209ENST00000557265 TM4SF1P30408 202 aa16.84■□□□□ 0.29
SNX6-209ENST00000557265 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
SNX6-209ENST00000557265 ZPR1O75312 459 aa16.83■□□□□ 0.28
SNX6-209ENST00000557265 FSTL1Q12841 308 aa16.83■□□□□ 0.28
SNX6-209ENST00000557265 USPL1Q5W0Q7 1092 aa16.83■□□□□ 0.28
SNX6-209ENST00000557265 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
SNX6-209ENST00000557265 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
SNX6-209ENST00000557265 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
SNX6-209ENST00000557265 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
SNX6-209ENST00000557265 IL13P35225 146 aa16.81■□□□□ 0.28
SNX6-209ENST00000557265 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNX6-209ENST00000557265 KLRG1Q96E93 195 aa16.81■□□□□ 0.28
SNX6-209ENST00000557265 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
SNX6-209ENST00000557265 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
SNX6-209ENST00000557265 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
SNX6-209ENST00000557265 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
SNX6-209ENST00000557265 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
SNX6-209ENST00000557265 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
SNX6-209ENST00000557265 SLC39A6Q13433 755 aa16.79■□□□□ 0.28
SNX6-209ENST00000557265 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
SNX6-209ENST00000557265 RASSF7Q02833 373 aa16.78■□□□□ 0.28
SNX6-209ENST00000557265 NFIXQ14938 502 aa16.78■□□□□ 0.28
SNX6-209ENST00000557265 COL13A1Q5TAT6 717 aaPredicted RBP16.77■□□□□ 0.28
SNX6-209ENST00000557265 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
SNX6-209ENST00000557265 NARFQ9UHQ1 456 aa16.77■□□□□ 0.28
SNX6-209ENST00000557265 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms