RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 PHF14O94880 888 aa29.36■■■□□ 2.29
SDR39U1-216ENST00000556175 C1orf141Q5JVX7 400 aa29.36■■■□□ 2.29
SDR39U1-216ENST00000556175 AEBP1Q8IUX7 1158 aa29.36■■■□□ 2.29
SDR39U1-216ENST00000556175 NLGN2Q8NFZ4 835 aa29.36■■■□□ 2.29
SDR39U1-216ENST00000556175 IL13P35225 146 aa29.35■■■□□ 2.29
SDR39U1-216ENST00000556175 SULT6B1Q6IMI4 303 aa29.35■■■□□ 2.29
SDR39U1-216ENST00000556175 ITPK1Q13572 414 aa29.34■■■□□ 2.29
SDR39U1-216ENST00000556175 PELP1Q8IZL8 1130 aaKnown RBP29.34■■■□□ 2.29
SDR39U1-216ENST00000556175 KDM6AO15550 1401 aaPredicted RBP29.34■■■□□ 2.29
SDR39U1-216ENST00000556175 ZNF831Q5JPB2 1677 aa29.34■■■□□ 2.29
SDR39U1-216ENST00000556175 CD2APQ9Y5K6 639 aa29.33■■■□□ 2.29
SDR39U1-216ENST00000556175 GNPATO15228 680 aa29.32■■■□□ 2.28
SDR39U1-216ENST00000556175 MTHFSP49914 203 aa29.32■■■□□ 2.28
SDR39U1-216ENST00000556175 CABP4P57796 275 aa29.32■■■□□ 2.28
SDR39U1-216ENST00000556175 AMIGO3Q86WK7 504 aa29.32■■■□□ 2.28
SDR39U1-216ENST00000556175 ZNF784Q8NCA9 323 aaPredicted RBP29.3■■■□□ 2.28
SDR39U1-216ENST00000556175 PER1O15534 1290 aaPredicted RBP29.29■■■□□ 2.28
SDR39U1-216ENST00000556175 RBM42Q9BTD8 480 aaKnown RBP29.29■■■□□ 2.28
SDR39U1-216ENST00000556175 GRIN3BO60391 1043 aa29.28■■■□□ 2.28
SDR39U1-216ENST00000556175 CC2D1BQ5T0F9 858 aaKnown RBP29.25■■■□□ 2.27
SDR39U1-216ENST00000556175 RTCBQ9Y3I0 505 aaKnown RBP29.25■■■□□ 2.27
SDR39U1-216ENST00000556175 GOLGB1Q14789 3259 aaKnown RBP29.25■■■□□ 2.27
SDR39U1-216ENST00000556175 NPC1L1Q9UHC9 1359 aa29.25■■■□□ 2.27
SDR39U1-216ENST00000556175 COL5A3P25940 1745 aaPredicted RBP29.24■■■□□ 2.27
SDR39U1-216ENST00000556175 SMIM5Q71RC9 77 aa29.24■■■□□ 2.27
SDR39U1-216ENST00000556175 CNTNAP4Q9C0A0 1308 aa29.23■■■□□ 2.27
SDR39U1-216ENST00000556175 AKAP4Q5JQC9 854 aa29.23■■■□□ 2.27
SDR39U1-216ENST00000556175 RC3H1Q5TC82 1133 aaKnown RBP29.23■■■□□ 2.27
SDR39U1-216ENST00000556175 SLC4A9Q96Q91 983 aa29.23■■■□□ 2.27
SDR39U1-216ENST00000556175 ADRA2BP18089 450 aa29.22■■■□□ 2.27
SDR39U1-216ENST00000556175 TRAPPC3LQ5T215 181 aa29.22■■■□□ 2.27
SDR39U1-216ENST00000556175 SCN11AQ9UI33 1791 aa29.21■■■□□ 2.27
SDR39U1-216ENST00000556175 DIAPH1O60610 1272 aaKnown RBP29.21■■■□□ 2.27
SDR39U1-216ENST00000556175 NFATC2IPQ8NCF5 419 aa29.21■■■□□ 2.27
SDR39U1-216ENST00000556175 YBX3P16989 372 aaKnown RBP eCLIP29.2■■■□□ 2.26
SDR39U1-216ENST00000556175 HMOX1P09601 288 aa29.18■■■□□ 2.26
SDR39U1-216ENST00000556175 PTCD1O75127 700 aaKnown RBP29.17■■■□□ 2.26
SDR39U1-216ENST00000556175 NLGN1Q8N2Q7 840 aa29.17■■■□□ 2.26
SDR39U1-216ENST00000556175 CICQ96RK0 1608 aaPredicted RBP29.16■■■□□ 2.26
SDR39U1-216ENST00000556175 RPS6KA4O75676 772 aa29.16■■■□□ 2.26
SDR39U1-216ENST00000556175 MMP10P09238 476 aa29.15■■■□□ 2.26
SDR39U1-216ENST00000556175 RFC4P35249 363 aa29.14■■■□□ 2.26
SDR39U1-216ENST00000556175 SLC52A2Q9HAB3 445 aa29.14■■■□□ 2.26
SDR39U1-216ENST00000556175 MRC1P22897 1456 aa29.14■■■□□ 2.26
SDR39U1-216ENST00000556175 ARHGEF1Q92888 912 aaKnown RBP29.13■■■□□ 2.25
SDR39U1-216ENST00000556175 TJP1Q07157 1748 aa29.11■■■□□ 2.25
SDR39U1-216ENST00000556175 COL3A1P02461 1466 aaPredicted RBP29.11■■■□□ 2.25
SDR39U1-216ENST00000556175 RNMTO43148 476 aaKnown RBP29.1■■■□□ 2.25
SDR39U1-216ENST00000556175 CRKLP46109 303 aaKnown RBP29.1■■■□□ 2.25
SDR39U1-216ENST00000556175 MTHFSDQ2M296 383 aaKnown RBP29.1■■■□□ 2.25
SDR39U1-216ENST00000556175 MYH14Q7Z406 1995 aaKnown RBP29.1■■■□□ 2.25
SDR39U1-216ENST00000556175 C4AP0C0L4 1744 aa29.09■■■□□ 2.25
SDR39U1-216ENST00000556175 LGR6Q9HBX8 967 aa29.09■■■□□ 2.25
SDR39U1-216ENST00000556175 ADAMTS7Q9UKP4 1686 aa29.09■■■□□ 2.25
SDR39U1-216ENST00000556175 GYS1P13807 737 aa29.08■■■□□ 2.25
SDR39U1-216ENST00000556175 CNGB1Q14028 1251 aaPredicted RBP29.08■■■□□ 2.25
SDR39U1-216ENST00000556175 VIRMAQ69YN4 1812 aaKnown RBP29.08■■■□□ 2.25
SDR39U1-216ENST00000556175 U2SURPO15042 1029 aaKnown RBP29.07■■■□□ 2.24
SDR39U1-216ENST00000556175 KIF13BQ9NQT8 1826 aa29.06■■■□□ 2.24
SDR39U1-216ENST00000556175 CCDC87Q9NVE4 849 aa29.05■■■□□ 2.24
SDR39U1-216ENST00000556175 C10orf71Q711Q0 1435 aa29.04■■■□□ 2.24
SDR39U1-216ENST00000556175 CFAP53Q96M91 514 aa29.04■■■□□ 2.24
SDR39U1-216ENST00000556175 PARP3Q9Y6F1 533 aa29.04■■■□□ 2.24
SDR39U1-216ENST00000556175 TGFB2P61812 414 aa29.03■■■□□ 2.24
SDR39U1-216ENST00000556175 GAS2L2Q8NHY3 880 aa29.03■■■□□ 2.24
SDR39U1-216ENST00000556175 USP42Q9H9J4 1324 aaKnown RBP29.02■■■□□ 2.24
SDR39U1-216ENST00000556175 GIGYF1O75420 1035 aaPredicted RBP29.02■■■□□ 2.24
SDR39U1-216ENST00000556175 PXDNLA1KZ92 1463 aa29.02■■■□□ 2.24
SDR39U1-216ENST00000556175 KCPQ6ZWJ8 1503 aa29.01■■■□□ 2.23
SDR39U1-216ENST00000556175 DNAJC10Q8IXB1 793 aa29.01■■■□□ 2.23
SDR39U1-216ENST00000556175 SLC39A6Q13433 755 aa29■■■□□ 2.23
SDR39U1-216ENST00000556175 INTS5Q6P9B9 1019 aaKnown RBP29■■■□□ 2.23
SDR39U1-216ENST00000556175 VSIG10Q8N0Z9 540 aa29■■■□□ 2.23
SDR39U1-216ENST00000556175 C1QTNF8P60827 252 aa28.99■■■□□ 2.23
SDR39U1-216ENST00000556175 WWC3Q9ULE0 1092 aa28.99■■■□□ 2.23
SDR39U1-216ENST00000556175 KIAA1551Q9HCM1 1747 aa28.98■■■□□ 2.23
SDR39U1-216ENST00000556175 ATP10DQ9P241 1426 aa28.98■■■□□ 2.23
SDR39U1-216ENST00000556175 TTC5Q8N0Z6 440 aa28.98■■■□□ 2.23
SDR39U1-216ENST00000556175 GNAT3A8MTJ3 354 aa28.97■■■□□ 2.23
SDR39U1-216ENST00000556175 CYP19A1P11511 503 aaPredicted RBP28.97■■■□□ 2.23
SDR39U1-216ENST00000556175 SRP68Q9UHB9 627 aaKnown RBP28.97■■■□□ 2.23
SDR39U1-216ENST00000556175 UBR2Q8IWV8 1755 aa28.97■■■□□ 2.23
SDR39U1-216ENST00000556175 ZPR1O75312 459 aa28.96■■■□□ 2.23
SDR39U1-216ENST00000556175 TEFQ10587 303 aa28.96■■■□□ 2.23
SDR39U1-216ENST00000556175 NUDCQ9Y266 331 aa28.96■■■□□ 2.23
SDR39U1-216ENST00000556175 SOS1Q07889 1333 aaPredicted RBP28.95■■■□□ 2.23
SDR39U1-216ENST00000556175 ADCY9O60503 1353 aa28.95■■■□□ 2.22
SDR39U1-216ENST00000556175 N4BP2Q86UW6 1770 aaPredicted RBP28.95■■■□□ 2.22
SDR39U1-216ENST00000556175 FKBP8Q14318 412 aa28.94■■■□□ 2.22
SDR39U1-216ENST00000556175 A0A0G2JLW4 131 aa28.93■■■□□ 2.22
SDR39U1-216ENST00000556175 COL15A1P39059 1388 aa28.91■■■□□ 2.22
SDR39U1-216ENST00000556175 BCS1LQ9Y276 419 aa28.91■■■□□ 2.22
SDR39U1-216ENST00000556175 STARD3NLO95772 234 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 DPEP1P16444 411 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 PPP2R1AP30153 589 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 PRKAR2BP31323 418 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 DDR1Q08345 913 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 USPL1Q5W0Q7 1092 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 IL17REQ8NFR9 667 aa28.9■■■□□ 2.22
SDR39U1-216ENST00000556175 RSPH6AQ9H0K4 717 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms